BLASTX nr result

ID: Panax21_contig00039397 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00039397
         (684 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003637168.1| Polynucleotidyl transferase [Medicago trunca...   150   3e-34
ref|XP_002337133.1| predicted protein [Populus trichocarpa] gi|2...   145   9e-33
ref|NP_199616.1| uncharacterized protein [Arabidopsis thaliana] ...   130   2e-28
dbj|BAK00361.1| predicted protein [Hordeum vulgare subsp. vulgare]    126   3e-27
ref|XP_003555007.1| PREDICTED: uncharacterized protein LOC100814...   124   2e-26

>ref|XP_003637168.1| Polynucleotidyl transferase [Medicago truncatula]
           gi|355503103|gb|AES84306.1| Polynucleotidyl transferase
           [Medicago truncatula]
          Length = 239

 Score =  150 bits (378), Expect = 3e-34
 Identities = 80/161 (49%), Positives = 101/161 (62%)
 Frame = -1

Query: 585 LDAVVLQWIYGTISNDLLHTIIAPKSTARQAWISLENIFQDNKATRAVSLEQEFNTIHLK 406
           LD+ VLQWIY TIS DLL TI+ P ST  +AW    +IFQDN+  RAV+LEQEF+   ++
Sbjct: 58  LDSTVLQWIYSTISTDLLTTILEPDSTTMEAWNRSSDIFQDNQNARAVTLEQEFSNTRME 117

Query: 405 DYPCITAYCQALKKLSDRLTNVGAPVTNQRLVLRLIVGLNSNYDGIATFLSQSSPLPTFS 226
           D+P ++ YCQ LK LSD+L NVG+PV N  LVL+LI G    Y  +AT + Q++PLP F 
Sbjct: 118 DFPNVSNYCQRLKMLSDQLRNVGSPVNNHHLVLQLIYGPPKAYRSVATLICQNNPLPKFY 177

Query: 225 EARSRLILEETRKANQAAMEATTADTALYHQSPPDPKLDNS 103
           +ARS L LEE   A      + T   A  H S   P  D S
Sbjct: 178 QARSMLTLEEACMAKM----SNTGSHAAMHTSQSKPTEDTS 214


>ref|XP_002337133.1| predicted protein [Populus trichocarpa] gi|222838337|gb|EEE76702.1|
           predicted protein [Populus trichocarpa]
          Length = 236

 Score =  145 bits (365), Expect = 9e-33
 Identities = 73/151 (48%), Positives = 106/151 (70%)
 Frame = -1

Query: 591 ARLDAVVLQWIYGTISNDLLHTIIAPKSTARQAWISLENIFQDNKATRAVSLEQEFNTIH 412
           +R+DA+VLQWIYGTIS DLL+ I+   STA  AW  L +IF DNK +RA+ LEQEF+ + 
Sbjct: 16  SRVDAIVLQWIYGTISEDLLNIILERDSTAALAWNRLRDIFSDNKNSRALYLEQEFSKVQ 75

Query: 411 LKDYPCITAYCQALKKLSDRLTNVGAPVTNQRLVLRLIVGLNSNYDGIATFLSQSSPLPT 232
           ++ +   ++YCQ LK LSD+L+NVG+PVTN+RLVL+L  GL   Y  + + +     LP 
Sbjct: 76  MEHFADASSYCQHLKSLSDQLSNVGSPVTNERLVLQLASGLTDAYASVGSQIHHGDSLPP 135

Query: 231 FSEARSRLILEETRKANQAAMEATTADTALY 139
           F ++RS L+LEET +  +AA   T++++A +
Sbjct: 136 FYKSRSMLVLEETTRTKKAAQ--TSSNSAFF 164


>ref|NP_199616.1| uncharacterized protein [Arabidopsis thaliana]
           gi|10177756|dbj|BAB11069.1| unnamed protein product
           [Arabidopsis thaliana] gi|332008231|gb|AED95614.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 369

 Score =  130 bits (328), Expect = 2e-28
 Identities = 65/136 (47%), Positives = 90/136 (66%)
 Frame = -1

Query: 582 DAVVLQWIYGTISNDLLHTIIAPKSTARQAWISLENIFQDNKATRAVSLEQEFNTIHLKD 403
           D +V  WIYGTI++ LL TII    TAR  W+SLEN+F+DNK  RA+  E E  T  + D
Sbjct: 71  DGLVKMWIYGTITDSLLDTIIKVGCTARDLWLSLENLFRDNKEARALQFENELRTTTIDD 130

Query: 402 YPCITAYCQALKKLSDRLTNVGAPVTNQRLVLRLIVGLNSNYDGIATFLSQSSPLPTFSE 223
              +  YCQ LK LSD LTNV +P++++ LV+ L+ GL   YD I   +   SP P+F+E
Sbjct: 131 LS-VHEYCQKLKSLSDLLTNVDSPISDRVLVMHLLNGLTEKYDYILNVIKHKSPFPSFTE 189

Query: 222 ARSRLILEETRKANQA 175
           ARS L++EE+R +N++
Sbjct: 190 ARSMLLMEESRLSNKS 205


>dbj|BAK00361.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 425

 Score =  126 bits (317), Expect = 3e-27
 Identities = 66/145 (45%), Positives = 93/145 (64%)
 Frame = -1

Query: 588 RLDAVVLQWIYGTISNDLLHTIIAPKSTARQAWISLENIFQDNKATRAVSLEQEFNTIHL 409
           R D VV  W+YG+IS+++L  I+A   TA++AW  + N+F DN+ TRAV LE EF  +  
Sbjct: 87  REDYVVRSWLYGSISDEILDIIMAEDQTAQEAWTLITNLFLDNQMTRAVYLEAEFRGLVQ 146

Query: 408 KDYPCITAYCQALKKLSDRLTNVGAPVTNQRLVLRLIVGLNSNYDGIATFLSQSSPLPTF 229
            D   +TAYC  LK LSD L +VG P+++Q LVL  + GLN+ +  I T ++  SPLP+F
Sbjct: 147 GDLS-VTAYCHRLKALSDALGDVGTPISDQTLVLNCLRGLNARFSDITTIVTMQSPLPSF 205

Query: 228 SEARSRLILEETRKANQAAMEATTA 154
           ++ RS L L ET+ AN   +   TA
Sbjct: 206 AQTRSLLTLRETQLANSTVVGHQTA 230


>ref|XP_003555007.1| PREDICTED: uncharacterized protein LOC100814678 [Glycine max]
          Length = 256

 Score =  124 bits (311), Expect = 2e-26
 Identities = 61/132 (46%), Positives = 91/132 (68%)
 Frame = -1

Query: 498 QAWISLENIFQDNKATRAVSLEQEFNTIHLKDYPCITAYCQALKKLSDRLTNVGAPVTNQ 319
           +AW  L +IFQDN+ +RAV+LEQEF+   ++++P +++YCQ LK L+D+L N+GAPV++ 
Sbjct: 2   EAWDRLRDIFQDNQHSRAVALEQEFSATSMENFPNVSSYCQCLKSLADQLKNIGAPVSDS 61

Query: 318 RLVLRLIVGLNSNYDGIATFLSQSSPLPTFSEARSRLILEETRKANQAAMEATTADTALY 139
           RLVL+L+ GL   Y G+ T + QS+PLP F +ARS L LEE   A +AA E+    +++ 
Sbjct: 62  RLVLQLVGGLTQPYRGVGTLIRQSNPLPPFYKARSILTLEEAGMAKEAATESAMIASSIN 121

Query: 138 HQSPPDPKLDNS 103
             SP   K  +S
Sbjct: 122 DGSPQPTKSGHS 133


Top