BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00039377
         (565 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26179.3| unnamed protein product [Vitis vinifera]              100   2e-19
ref|XP_003550050.1| PREDICTED: multiple RNA-binding domain-conta...    97   2e-18
ref|NP_197404.2| RNA recognition motif-containing protein [Arabi...    89   6e-16
ref|XP_002873925.1| predicted protein [Arabidopsis lyrata subsp....    86   4e-15
ref|NP_974808.1| RNA recognition motif-containing protein [Arabi...    72   5e-11

>emb|CBI26179.3| unnamed protein product [Vitis vinifera]
          Length = 156

 Score =  100 bits (248), Expect = 2e-19
 Identities = 53/108 (49%), Positives = 70/108 (64%)
 Frame = +2

Query: 161 CCLSSASESVYISPSSIIFVKGLPLSTFEGSLKTAFSQFGEVTRVKIITDKKTRKSLGFA 340
           CC +    S     S+ IF+KGLP ST EGSLK AFSQFGEV++V+I  +K + + LGFA
Sbjct: 54  CCATDDESS-----STRIFIKGLPQSTCEGSLKKAFSQFGEVSKVRIKRNKISSQPLGFA 108

Query: 341 YVWFASREDAMT*ELVLPFQFLDGRFVSVKMAIPGSCKKQVKAMPFKF 484
           + WF + E A     ++  +F  GRFV VK+A PG  K+ VKA P+KF
Sbjct: 109 FAWFTTEESAQLAVKMMDGKFFHGRFVFVKIAKPGPSKRHVKAAPYKF 156


>ref|XP_003550050.1| PREDICTED: multiple RNA-binding domain-containing protein 1-like
           [Glycine max]
          Length = 160

 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 52/108 (48%), Positives = 68/108 (62%)
 Frame = +2

Query: 161 CCLSSASESVYISPSSIIFVKGLPLSTFEGSLKTAFSQFGEVTRVKIITDKKTRKSLGFA 340
           CC SS   ++  SP   IFVKGLPLST EG L   FS+FGEVT +++  DK++ +SLGFA
Sbjct: 55  CCTSSVPCNLPSSPK--IFVKGLPLSTSEGHLMKVFSEFGEVTLIQLPIDKESGQSLGFA 112

Query: 341 YVWFASREDAMT*ELVLPFQFLDGRFVSVKMAIPGSCKKQVKAMPFKF 484
           Y+WF   E A    L +  +F  GRF+ V +A PGS K   +A  +KF
Sbjct: 113 YIWFVKEESAQLAVLEMNGKFFYGRFIYVTIAKPGSSKSSKRATAYKF 160


>ref|NP_197404.2| RNA recognition motif-containing protein [Arabidopsis thaliana]
           gi|332005259|gb|AED92642.1| RNA recognition
           motif-containing protein [Arabidopsis thaliana]
          Length = 172

 Score = 88.6 bits (218), Expect = 6e-16
 Identities = 47/97 (48%), Positives = 63/97 (64%), Gaps = 2/97 (2%)
 Frame = +2

Query: 200 PSSI--IFVKGLPLSTFEGSLKTAFSQFGEVTRVKIITDKKTRKSLGFAYVWFASREDAM 373
           PSSI  +FVKG   S  EG LK  FS+FG+VT VKII +++TR+SLG+ YVWF S+EDA 
Sbjct: 73  PSSISSLFVKGFSDSVSEGRLKKVFSEFGQVTNVKIIANERTRQSLGYGYVWFNSKEDAQ 132

Query: 374 T*ELVLPFQFLDGRFVSVKMAIPGSCKKQVKAMPFKF 484
           +    +  +F DGRF+ VK   PG  +++     F F
Sbjct: 133 SAVEAMNGKFFDGRFILVKFGQPGLSRRRRPHSDFLF 169


>ref|XP_002873925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297319762|gb|EFH50184.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 167

 Score = 85.9 bits (211), Expect = 4e-15
 Identities = 42/88 (47%), Positives = 58/88 (65%)
 Frame = +2

Query: 197 SPSSIIFVKGLPLSTFEGSLKTAFSQFGEVTRVKIITDKKTRKSLGFAYVWFASREDAMT 376
           +P S +FVKG   S  EG LK  FS+FG+VT VKII +++TR+SLG+ YVWF  +EDA  
Sbjct: 72  TPISSVFVKGFSDSVSEGRLKKVFSEFGQVTNVKIIINERTRQSLGYGYVWFNRKEDAQL 131

Query: 377 *ELVLPFQFLDGRFVSVKMAIPGSCKKQ 460
               +  +F DGRF+ VK   PG  +++
Sbjct: 132 AVEAMNGKFFDGRFILVKFGQPGLSRRR 159


>ref|NP_974808.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
           gi|117168081|gb|ABK32123.1| At5g19030 [Arabidopsis
           thaliana] gi|332005260|gb|AED92643.1| RNA recognition
           motif-containing protein [Arabidopsis thaliana]
          Length = 126

 Score = 72.4 bits (176), Expect = 5e-11
 Identities = 36/61 (59%), Positives = 46/61 (75%), Gaps = 2/61 (3%)
 Frame = +2

Query: 200 PSSI--IFVKGLPLSTFEGSLKTAFSQFGEVTRVKIITDKKTRKSLGFAYVWFASREDAM 373
           PSSI  +FVKG   S  EG LK  FS+FG+VT VKII +++TR+SLG+ YVWF S+EDA 
Sbjct: 54  PSSISSLFVKGFSDSVSEGRLKKVFSEFGQVTNVKIIANERTRQSLGYGYVWFNSKEDAQ 113

Query: 374 T 376
           +
Sbjct: 114 S 114