BLASTX nr result

ID: Panax21_contig00039354 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00039354
         (428 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276669.1| PREDICTED: uncharacterized protein LOC100266...   103   2e-20
ref|XP_002533699.1| conserved hypothetical protein [Ricinus comm...    92   4e-17
ref|XP_002318544.1| predicted protein [Populus trichocarpa] gi|2...    85   7e-15
ref|XP_002311465.1| predicted protein [Populus trichocarpa] gi|2...    84   9e-15
ref|XP_002321480.1| predicted protein [Populus trichocarpa] gi|2...    82   5e-14

>ref|XP_002276669.1| PREDICTED: uncharacterized protein LOC100266297 [Vitis vinifera]
          Length = 252

 Score =  103 bits (256), Expect = 2e-20
 Identities = 55/116 (47%), Positives = 72/116 (62%), Gaps = 13/116 (11%)
 Frame = -2

Query: 310 SKSFWRIGRSSSVHCDNSYXXXXXXXXXXLFWSLPLMSRSNSTGSVPSPRQILKENKKQN 131
           SKSFW   RSSS++CDN +             SLPL+SRSNSTGSV + ++  K+N ++ 
Sbjct: 122 SKSFWPFKRSSSLNCDNVHRRSLMC-------SLPLLSRSNSTGSVQNSKRTSKQNSQKQ 174

Query: 130 -------------SSPHKHVYQSSQKPPLKKNYGGAYGNGVWMSPVLNMPPPYIAK 2
                        SS + + Y   QKPPLKKNYGG+YGNGVW+SPV+N+ P YI+K
Sbjct: 175 PSMAKSSSSSSSASSTNFYTYPVPQKPPLKKNYGGSYGNGVWISPVINVSPAYISK 230


>ref|XP_002533699.1| conserved hypothetical protein [Ricinus communis]
           gi|223526394|gb|EEF28682.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 255

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 57/123 (46%), Positives = 70/123 (56%), Gaps = 20/123 (16%)
 Frame = -2

Query: 310 SKSFWRIGRSSSVHCDNSYXXXXXXXXXXLFWSLPLMSRSNSTGSVPSPR------QILK 149
           SKSFW   RSSS++CD                SLPL+SRSNSTGSVP+P+      + L 
Sbjct: 122 SKSFWGFKRSSSLNCD----------IKKSLCSLPLLSRSNSTGSVPNPKHKPTSCKDLS 171

Query: 148 ENKKQN------------SSPHKHVYQSSQKPPLKKNYGGAYG--NGVWMSPVLNMPPPY 11
           +N  Q             SS   +VY    KPPLKK+YGG++G  NG+  SPVLN+PPPY
Sbjct: 172 KNNSQKQLSRKSSASPPASSASTYVYALPHKPPLKKHYGGSHGKNNGLKFSPVLNVPPPY 231

Query: 10  IAK 2
           IAK
Sbjct: 232 IAK 234


>ref|XP_002318544.1| predicted protein [Populus trichocarpa] gi|222859217|gb|EEE96764.1|
           predicted protein [Populus trichocarpa]
          Length = 236

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 55/112 (49%), Positives = 66/112 (58%), Gaps = 5/112 (4%)
 Frame = -2

Query: 322 QKPQSKSFWRIGRSSSVHCDNSYXXXXXXXXXXLFWSLPLMSRSNSTGSVP-SPRQILKE 146
           +KPQSKSFW   RSSS++ D                SLPL+SRS+STGSVP + R  LK+
Sbjct: 118 EKPQSKSFWGFKRSSSLNSD----------IKRSLCSLPLLSRSSSTGSVPYAKRTTLKD 167

Query: 145 NKKQNS----SPHKHVYQSSQKPPLKKNYGGAYGNGVWMSPVLNMPPPYIAK 2
            +K NS    S    VY   QKPPLKK   G+YG    +SPV N+PPPYI K
Sbjct: 168 MRKNNSQKQQSASSFVYSLPQKPPLKK--AGSYGK---ISPVFNLPPPYIYK 214


>ref|XP_002311465.1| predicted protein [Populus trichocarpa] gi|222851285|gb|EEE88832.1|
           predicted protein [Populus trichocarpa]
          Length = 262

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 53/125 (42%), Positives = 73/125 (58%), Gaps = 18/125 (14%)
 Frame = -2

Query: 322 QKPQSKSFWRIGRSSSVHCDNSYXXXXXXXXXXLFWSLPLMSRSNSTGSVPSPRQ---IL 152
           +KP SKSFW+  RS+S++CD++              SL  +SRSNSTGS P+P +   + 
Sbjct: 124 EKPASKSFWQFKRSNSLNCDSTRSKGLIR-------SLHFLSRSNSTGSAPNPPKQGMLS 176

Query: 151 KENKK-----QNSSPHK----------HVYQSSQKPPLKKNYGGAYGNGVWMSPVLNMPP 17
           KE +K     Q S P +          + Y S QKPPL +  G +YGNGV +SPVLN+PP
Sbjct: 177 KETQKPQLQKQASVPSRKSSVPSSAAFYSYNSQQKPPLLRKCG-SYGNGVRISPVLNIPP 235

Query: 16  PYIAK 2
           PYI++
Sbjct: 236 PYISR 240


>ref|XP_002321480.1| predicted protein [Populus trichocarpa] gi|222868476|gb|EEF05607.1|
           predicted protein [Populus trichocarpa]
          Length = 240

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 56/113 (49%), Positives = 64/113 (56%), Gaps = 7/113 (6%)
 Frame = -2

Query: 319 KPQSKSFWRIGRSSSVHCDNSYXXXXXXXXXXLFWSLPLMSRSNSTGSVP-SPRQILKEN 143
           KPQSKSFW   RSSS++ D                SL L+SRSNSTGSVP S R  LK+ 
Sbjct: 121 KPQSKSFWGFKRSSSLNYD----------IKRSLCSLTLLSRSNSTGSVPNSKRTTLKDT 170

Query: 142 KKQNSSPHKH------VYQSSQKPPLKKNYGGAYGNGVWMSPVLNMPPPYIAK 2
            K NS   +       VY   QKPPLKK+  G YG    +SPVLN+PPPYI K
Sbjct: 171 HKSNSQKQQSTAMENLVYSLPQKPPLKKS--GYYGK---ISPVLNVPPPYIYK 218


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