BLASTX nr result
ID: Panax21_contig00039349
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00039349
(557 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABG37668.1| gag protein [Populus trichocarpa] 278 3e-73
gb|ABG37657.1| integrase [Populus trichocarpa] 278 3e-73
gb|ABG37670.1| integrase [Populus trichocarpa] 273 2e-71
gb|ABG37671.1| integrase [Populus trichocarpa] 269 2e-70
emb|CAN77867.1| hypothetical protein VITISV_001382 [Vitis vinifera] 269 3e-70
>gb|ABG37668.1| gag protein [Populus trichocarpa]
Length = 1886
Score = 278 bits (712), Expect = 3e-73
Identities = 129/185 (69%), Positives = 159/185 (85%)
Frame = +1
Query: 1 ILLAVDYVSKWVEVIPTKTNDNKVVVKFLKENIFSRFGTPRAIISDQGKHFRNQPFSSSL 180
IL+AVDYVSKW+E IP++TND+K V+KFLKENI SRFG PRA+ISD G HF N+PF S +
Sbjct: 977 ILVAVDYVSKWIEAIPSRTNDHKTVIKFLKENILSRFGIPRAMISDGGTHFCNKPFESLM 1036
Query: 181 KKYYITHKLATSYHPQTSGQVEVSNRQIK*ILEKTVSSNRKDWSLKLSDALWAYRTAFKT 360
KKY ITHK+AT YHPQTSGQVE++NR+IK ILEKTV+ NRKDWSL+L+DALWAYRTA+KT
Sbjct: 1037 KKYGITHKVATPYHPQTSGQVELANREIKQILEKTVNPNRKDWSLRLNDALWAYRTAYKT 1096
Query: 361 NLGMSPYRLVFGKACHLPVELEHRALWAIKQLNFDMSTGGSHRQLQLAELDEIRNDTYEN 540
+LGMSPYRLV+GK CHLPVE+EH+A WAIK N ++ R+LQ+ EL+EIRND Y+N
Sbjct: 1097 SLGMSPYRLVYGKPCHLPVEIEHKAYWAIKAFNSNIDDASQLRKLQINELEEIRNDAYDN 1156
Query: 541 AKIYK 555
++I+K
Sbjct: 1157 SRIHK 1161
Score = 126 bits (317), Expect = 2e-27
Identities = 59/88 (67%), Positives = 71/88 (80%)
Frame = +1
Query: 13 VDYVSKWVEVIPTKTNDNKVVVKFLKENIFSRFGTPRAIISDQGKHFRNQPFSSSLKKYY 192
VDYVSKW+E IP++TND+K V+KFLKENI SRFG PRA+ISD G HF N+PF S +KKY
Sbjct: 732 VDYVSKWIEAIPSRTNDHKTVIKFLKENILSRFGIPRAMISDGGTHFCNKPFESLMKKYG 791
Query: 193 ITHKLATSYHPQTSGQVEVSNRQIK*IL 276
ITHK+AT YHPQTSGQ + R ++ IL
Sbjct: 792 ITHKVATPYHPQTSGQKDSKARLVRWIL 819
>gb|ABG37657.1| integrase [Populus trichocarpa]
Length = 1738
Score = 278 bits (712), Expect = 3e-73
Identities = 129/185 (69%), Positives = 159/185 (85%)
Frame = +1
Query: 1 ILLAVDYVSKWVEVIPTKTNDNKVVVKFLKENIFSRFGTPRAIISDQGKHFRNQPFSSSL 180
IL+AVDYVSKW+E IP++TND+K V+KFLKENI SRFG PRA+ISD G HF N+PF S +
Sbjct: 829 ILVAVDYVSKWIEAIPSRTNDHKTVIKFLKENILSRFGIPRAMISDGGTHFCNKPFESLM 888
Query: 181 KKYYITHKLATSYHPQTSGQVEVSNRQIK*ILEKTVSSNRKDWSLKLSDALWAYRTAFKT 360
KKY ITHK+AT YHPQTSGQVE++NR+IK ILEKTV+ NRKDWSL+L+DALWAYRTA+KT
Sbjct: 889 KKYGITHKVATPYHPQTSGQVELANREIKQILEKTVNPNRKDWSLRLNDALWAYRTAYKT 948
Query: 361 NLGMSPYRLVFGKACHLPVELEHRALWAIKQLNFDMSTGGSHRQLQLAELDEIRNDTYEN 540
+LGMSPYRLV+GK CHLPVE+EH+A WAIK N ++ R+LQ+ EL+EIRND Y+N
Sbjct: 949 SLGMSPYRLVYGKPCHLPVEIEHKAYWAIKAFNSNIDDASQLRKLQINELEEIRNDAYDN 1008
Query: 541 AKIYK 555
++I+K
Sbjct: 1009 SRIHK 1013
Score = 126 bits (317), Expect = 2e-27
Identities = 59/88 (67%), Positives = 71/88 (80%)
Frame = +1
Query: 13 VDYVSKWVEVIPTKTNDNKVVVKFLKENIFSRFGTPRAIISDQGKHFRNQPFSSSLKKYY 192
VDYVSKW+E IP++TND+K V+KFLKENI SRFG PRA+ISD G HF N+PF S +KKY
Sbjct: 584 VDYVSKWIEAIPSRTNDHKTVIKFLKENILSRFGIPRAMISDGGTHFCNKPFESLMKKYG 643
Query: 193 ITHKLATSYHPQTSGQVEVSNRQIK*IL 276
ITHK+AT YHPQTSGQ + R ++ IL
Sbjct: 644 ITHKVATPYHPQTSGQKDSKARLVRWIL 671
>gb|ABG37670.1| integrase [Populus trichocarpa]
Length = 649
Score = 273 bits (697), Expect = 2e-71
Identities = 126/185 (68%), Positives = 157/185 (84%)
Frame = +1
Query: 1 ILLAVDYVSKWVEVIPTKTNDNKVVVKFLKENIFSRFGTPRAIISDQGKHFRNQPFSSSL 180
IL+AVDYVSKW+E IP++TND+K V+KFLKENI SRFG PRA+ISD G HF N+PF S +
Sbjct: 228 ILVAVDYVSKWIEAIPSRTNDHKTVIKFLKENILSRFGIPRAMISDGGTHFCNKPFESLM 287
Query: 181 KKYYITHKLATSYHPQTSGQVEVSNRQIK*ILEKTVSSNRKDWSLKLSDALWAYRTAFKT 360
KKY ITHK+AT YHPQTSGQVE++N++IK ILEKTV+ N KDWSL+L+DALWAYRT +KT
Sbjct: 288 KKYGITHKVATPYHPQTSGQVELANKEIKQILEKTVNPNWKDWSLRLNDALWAYRTTYKT 347
Query: 361 NLGMSPYRLVFGKACHLPVELEHRALWAIKQLNFDMSTGGSHRQLQLAELDEIRNDTYEN 540
+LGMSPYRLV+GK CHLPVE+EH+A WAIK N ++ R+LQ+ EL+EIRND Y+N
Sbjct: 348 SLGMSPYRLVYGKPCHLPVEIEHKAYWAIKAFNSNIDDASQLRKLQINELEEIRNDAYDN 407
Query: 541 AKIYK 555
++I+K
Sbjct: 408 SRIHK 412
>gb|ABG37671.1| integrase [Populus trichocarpa]
Length = 1332
Score = 269 bits (688), Expect = 2e-70
Identities = 126/185 (68%), Positives = 154/185 (83%)
Frame = +1
Query: 1 ILLAVDYVSKWVEVIPTKTNDNKVVVKFLKENIFSRFGTPRAIISDQGKHFRNQPFSSSL 180
IL+AVDYVSKW+E IP++ ND+K V+KFLKENI SRFG PRA+ISD G HF N F S +
Sbjct: 916 ILVAVDYVSKWIEAIPSRNNDHKTVIKFLKENILSRFGIPRAMISDGGTHFCNTSFESLM 975
Query: 181 KKYYITHKLATSYHPQTSGQVEVSNRQIK*ILEKTVSSNRKDWSLKLSDALWAYRTAFKT 360
KKY ITHK+AT YHPQTSGQ+E++NR+IK ILEKTV+ NRKDWSL+L+DALWAYRTA+KT
Sbjct: 976 KKYGITHKVATPYHPQTSGQIELANREIKQILEKTVNPNRKDWSLRLNDALWAYRTAYKT 1035
Query: 361 NLGMSPYRLVFGKACHLPVELEHRALWAIKQLNFDMSTGGSHRQLQLAELDEIRNDTYEN 540
+LGMSPY+LV+GK CHLPVELEH+A WAIK N ++ +LQ+ E +EIRND YEN
Sbjct: 1036 SLGMSPYKLVYGKPCHLPVELEHKAYWAIKAFNSNLDNASQLCKLQINEPEEIRNDAYEN 1095
Query: 541 AKIYK 555
+KI+K
Sbjct: 1096 SKIHK 1100
>emb|CAN77867.1| hypothetical protein VITISV_001382 [Vitis vinifera]
Length = 2497
Score = 269 bits (687), Expect = 3e-70
Identities = 129/185 (69%), Positives = 154/185 (83%)
Frame = +1
Query: 1 ILLAVDYVSKWVEVIPTKTNDNKVVVKFLKENIFSRFGTPRAIISDQGKHFRNQPFSSSL 180
IL+ VDYVSKWVE IP +TND+KVV+KFLKENIFSRFG P+AIISD G HF N+PF + L
Sbjct: 1563 ILVGVDYVSKWVEAIPCRTNDHKVVLKFLKENIFSRFGVPKAIISDGGTHFCNKPFETLL 1622
Query: 181 KKYYITHKLATSYHPQTSGQVEVSNRQIK*ILEKTVSSNRKDWSLKLSDALWAYRTAFKT 360
KY + HK+AT YHPQTSGQVE++NR+IK IL K V+ NRKDWS+KL D+LWAYRTA+KT
Sbjct: 1623 AKYGVKHKVATPYHPQTSGQVELANREIKNILMKVVNVNRKDWSIKLLDSLWAYRTAYKT 1682
Query: 361 NLGMSPYRLVFGKACHLPVELEHRALWAIKQLNFDMSTGGSHRQLQLAELDEIRNDTYEN 540
LGMSPYRLV+GKACHLPVE+E++A WAIK+LN D+S G R L L EL+E+RND Y N
Sbjct: 1683 ILGMSPYRLVYGKACHLPVEIEYKAWWAIKKLNMDLSRAGLKRCLDLNELEELRNDAYLN 1742
Query: 541 AKIYK 555
+KI K
Sbjct: 1743 SKIAK 1747