BLASTX nr result

ID: Panax21_contig00039341 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00039341
         (577 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263197.2| PREDICTED: putative pentatricopeptide repeat...   249   3e-64
emb|CBI38188.3| unnamed protein product [Vitis vinifera]              249   3e-64
emb|CAN71462.1| hypothetical protein VITISV_018656 [Vitis vinifera]   249   3e-64
ref|XP_003529187.1| PREDICTED: putative pentatricopeptide repeat...   241   5e-62
ref|XP_002512645.1| pentatricopeptide repeat-containing protein,...   238   4e-61

>ref|XP_002263197.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Vitis vinifera]
          Length = 611

 Score =  249 bits (635), Expect = 3e-64
 Identities = 113/143 (79%), Positives = 131/143 (91%)
 Frame = -2

Query: 576 KKRGVKKEPGLSWIEHQGTVHYFCVGDSSHPDMKLINGMLEWLNMKTKSAGYIPNCSVIL 397
           K++GVKKEPGLSWIE QGTVH F VGD+SHP++++INGMLEWL+MKTK AGYIPN +V+L
Sbjct: 469 KRKGVKKEPGLSWIESQGTVHSFTVGDTSHPEVRVINGMLEWLHMKTKKAGYIPNYNVVL 528

Query: 396 LNVEDDEKARLLWVHSERLALAFGLTRILSGRPIRIMKNLRICVDCHAIIKFISKVVQRE 217
           L+VED+EK RLLWVHSERLAL+FG+ R  SG PIRIMKNLRICVDCHA IK ISKVVQRE
Sbjct: 529 LDVEDEEKERLLWVHSERLALSFGIIRTPSGSPIRIMKNLRICVDCHAAIKCISKVVQRE 588

Query: 216 IIIRDINRFHHFQDGVCSCGDYW 148
           I++RDINRFHHFQ+G+CSCGDYW
Sbjct: 589 IVVRDINRFHHFQEGLCSCGDYW 611


>emb|CBI38188.3| unnamed protein product [Vitis vinifera]
          Length = 744

 Score =  249 bits (635), Expect = 3e-64
 Identities = 113/143 (79%), Positives = 131/143 (91%)
 Frame = -2

Query: 576  KKRGVKKEPGLSWIEHQGTVHYFCVGDSSHPDMKLINGMLEWLNMKTKSAGYIPNCSVIL 397
            K++GVKKEPGLSWIE QGTVH F VGD+SHP++++INGMLEWL+MKTK AGYIPN +V+L
Sbjct: 602  KRKGVKKEPGLSWIESQGTVHSFTVGDTSHPEVRVINGMLEWLHMKTKKAGYIPNYNVVL 661

Query: 396  LNVEDDEKARLLWVHSERLALAFGLTRILSGRPIRIMKNLRICVDCHAIIKFISKVVQRE 217
            L+VED+EK RLLWVHSERLAL+FG+ R  SG PIRIMKNLRICVDCHA IK ISKVVQRE
Sbjct: 662  LDVEDEEKERLLWVHSERLALSFGIIRTPSGSPIRIMKNLRICVDCHAAIKCISKVVQRE 721

Query: 216  IIIRDINRFHHFQDGVCSCGDYW 148
            I++RDINRFHHFQ+G+CSCGDYW
Sbjct: 722  IVVRDINRFHHFQEGLCSCGDYW 744


>emb|CAN71462.1| hypothetical protein VITISV_018656 [Vitis vinifera]
          Length = 787

 Score =  249 bits (635), Expect = 3e-64
 Identities = 113/143 (79%), Positives = 131/143 (91%)
 Frame = -2

Query: 576  KKRGVKKEPGLSWIEHQGTVHYFCVGDSSHPDMKLINGMLEWLNMKTKSAGYIPNCSVIL 397
            K++GVKKEPGLSWIE QGTVH F VGD+SHP++++INGMLEWL+MKTK AGYIPN +V+L
Sbjct: 645  KRKGVKKEPGLSWIESQGTVHSFTVGDTSHPEVRVINGMLEWLHMKTKKAGYIPNYNVVL 704

Query: 396  LNVEDDEKARLLWVHSERLALAFGLTRILSGRPIRIMKNLRICVDCHAIIKFISKVVQRE 217
            L+VED+EK RLLWVHSERLAL+FG+ R  SG PIRIMKNLRICVDCHA IK ISKVVQRE
Sbjct: 705  LDVEDEEKERLLWVHSERLALSFGIIRTPSGSPIRIMKNLRICVDCHAAIKCISKVVQRE 764

Query: 216  IIIRDINRFHHFQDGVCSCGDYW 148
            I++RDINRFHHFQ+G+CSCGDYW
Sbjct: 765  IVVRDINRFHHFQEGLCSCGDYW 787


>ref|XP_003529187.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g13230, mitochondrial-like [Glycine max]
          Length = 780

 Score =  241 bits (616), Expect = 5e-62
 Identities = 109/143 (76%), Positives = 128/143 (89%)
 Frame = -2

Query: 576  KKRGVKKEPGLSWIEHQGTVHYFCVGDSSHPDMKLINGMLEWLNMKTKSAGYIPNCSVIL 397
            KK+ VKKEPGLSW+E+QG VHYF VGD+SHP++KLI  MLEWL  KT+ AGY+P+CSV+L
Sbjct: 638  KKKKVKKEPGLSWVENQGVVHYFTVGDTSHPNIKLIFAMLEWLYKKTRDAGYVPDCSVVL 697

Query: 396  LNVEDDEKARLLWVHSERLALAFGLTRILSGRPIRIMKNLRICVDCHAIIKFISKVVQRE 217
            L+VEDDEK RLLW+HSERLALAFGL +I SG  IRI+KNLRICVDCHA+IK +SK+VQRE
Sbjct: 698  LDVEDDEKERLLWMHSERLALAFGLIQIPSGCSIRIIKNLRICVDCHAVIKLVSKIVQRE 757

Query: 216  IIIRDINRFHHFQDGVCSCGDYW 148
            I+IRDINRFHHF+ GVCSCGDYW
Sbjct: 758  IVIRDINRFHHFRQGVCSCGDYW 780


>ref|XP_002512645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223548606|gb|EEF50097.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 716

 Score =  238 bits (608), Expect = 4e-61
 Identities = 108/143 (75%), Positives = 125/143 (87%)
 Frame = -2

Query: 576  KKRGVKKEPGLSWIEHQGTVHYFCVGDSSHPDMKLINGMLEWLNMKTKSAGYIPNCSVIL 397
            K +GVKKEPGLSWIE+QG VHYF VGD+SHPDMK+I+GMLEWLNMKT+ AGY+P+ + +L
Sbjct: 574  KNKGVKKEPGLSWIENQGIVHYFSVGDTSHPDMKMISGMLEWLNMKTEKAGYVPDLNAVL 633

Query: 396  LNVEDDEKARLLWVHSERLALAFGLTRILSGRPIRIMKNLRICVDCHAIIKFISKVVQRE 217
             +VEDDEK R LWVHSERLALAFGL R  S   IRI+KNLRIC DCH+ IK ISK+VQR+
Sbjct: 634  RDVEDDEKKRHLWVHSERLALAFGLIRTPSRGHIRILKNLRICTDCHSAIKLISKIVQRD 693

Query: 216  IIIRDINRFHHFQDGVCSCGDYW 148
            IIIRD+NRFHHFQDG+CSCGDYW
Sbjct: 694  IIIRDMNRFHHFQDGICSCGDYW 716


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