BLASTX nr result

ID: Panax21_contig00039338 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00039338
         (934 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274010.1| PREDICTED: cellulose synthase-like protein D...   361   2e-97
ref|XP_002320989.1| predicted protein [Populus trichocarpa] gi|2...   342   1e-91
gb|AFZ78586.1| cellulose synthase-like protein [Populus tomentosa]    339   5e-91
ref|XP_002523143.1| Cellulose synthase A catalytic subunit 3 [UD...   338   1e-90
gb|ADQ28096.1| celullose synthase-like D protein [Gossypium hirs...   334   2e-89

>ref|XP_002274010.1| PREDICTED: cellulose synthase-like protein D5-like [Vitis vinifera]
          Length = 1171

 Score =  361 bits (926), Expect = 2e-97
 Identities = 172/305 (56%), Positives = 209/305 (68%), Gaps = 6/305 (1%)
 Frame = -3

Query: 899 DFVAYTVHIPSTPDNRIFXXXXXXXXXXXXXXXXXN--YIRDTVYTGGFNSETKAHVMSK 726
           ++V YTVH+P TPD+                       +I  T++TGGFNS T+ HV+ +
Sbjct: 76  EYVTYTVHMPPTPDHNPISASQTSLNEDDKNLGKPERSFISGTIFTGGFNSVTRGHVL-E 134

Query: 725 WEDESEPVVKSKKLCAMDGCDEKLVDG-VLRNNQCECGFRICRDCYLDCNSSGGGYCPGC 549
              E +  +KS  LC M GCDEK + G VLR   CECGF+ICR+CYLDC  SGGG+CPGC
Sbjct: 135 CSMERKETMKSGILCGMKGCDEKAMQGKVLRGGPCECGFKICRECYLDCVGSGGGHCPGC 194

Query: 548 KEPY---NKDDTSDYEREEHNSEAKDQPNSLPRSRGVRLGKNFSLVQSFKAPNQDFDHTR 378
           KEPY   N DD S Y+ +E  SEA+DQ   LP     +  K  SLV+SFKAPN DFDHTR
Sbjct: 195 KEPYKDVNDDDGSSYDDDEPRSEAEDQALPLPSMADFKPDKRLSLVKSFKAPNHDFDHTR 254

Query: 377 WLFETNGTYGFGNAVWPREGYEFGRGTDGYENPPKFNERRNRPLTRKVGISAAIISPYXX 198
           WL+ET GTYG+GNAVWP++GY FG G +G+E+PP F E+  RPLTRKV +SAAIISPY  
Sbjct: 255 WLYETKGTYGYGNAVWPKDGYGFGSGVNGFEHPPDFGEKTRRPLTRKVNVSAAIISPYRL 314

Query: 197 XXXXXXXXXVCFLTWRISHPNHEAMWLWIMSVVCEVWFALSWLLDQLPKICPVNRVTDLS 18
                      FLTWRI HPN +AMWLW MS+ CE+WFALSW+LDQLPK+CP+NRVTDLS
Sbjct: 315 LVLLRLVALGFFLTWRIRHPNRDAMWLWGMSITCELWFALSWILDQLPKLCPINRVTDLS 374

Query: 17  VLEDR 3
           VL+DR
Sbjct: 375 VLKDR 379


>ref|XP_002320989.1| predicted protein [Populus trichocarpa] gi|222861762|gb|EEE99304.1|
           predicted protein [Populus trichocarpa]
          Length = 1138

 Score =  342 bits (876), Expect = 1e-91
 Identities = 173/325 (53%), Positives = 213/325 (65%), Gaps = 15/325 (4%)
 Frame = -3

Query: 932 RFLSVSKDSV-----DDFVAYTVHIPSTPDNRIFXXXXXXXXXXXXXXXXXN--YIRDTV 774
           R+ S+S+D        +FV+YTVHIP TPD++ F                    +I  T+
Sbjct: 32  RYCSMSRDDTTEEINSEFVSYTVHIPPTPDHQSFSASQTSLAEDITNAAKPERSFISGTI 91

Query: 773 YTGGFNSETKAHVMSKWEDESEPVVKSKKLCAMDGCDEKLVDGVLRNNQCECGFRICRDC 594
           +TGGFNS T+ HV+    + +E + KS  +C M GCDEK + G     +CECGF+ICRDC
Sbjct: 92  FTGGFNSVTRGHVVDCSMENNESL-KSGLVCGMKGCDEKAIRG-----KCECGFKICRDC 145

Query: 593 YLDC-NSSGGGYCPGCKEPYNK-----DDTSDYEREEHNSEAKDQPNSLPRSRGVRLGKN 432
           YLDC  S+GGG+CPGCKEPY       +D  DY+ +E  SEA DQ   LP+     L K 
Sbjct: 146 YLDCVGSNGGGHCPGCKEPYKDADDEAEDDDDYDYDEAKSEADDQALPLPK-----LDKR 200

Query: 431 FSLVQSFKAPNQ--DFDHTRWLFETNGTYGFGNAVWPREGYEFGRGTDGYENPPKFNERR 258
            SLV+SFKA +   DFDHTRWLFET GTYG+GNAVWP++GY  G G +G+E PP F ER 
Sbjct: 201 LSLVKSFKAQSHPPDFDHTRWLFETKGTYGYGNAVWPKDGYGAGSGANGFEPPPDFGERS 260

Query: 257 NRPLTRKVGISAAIISPYXXXXXXXXXXXVCFLTWRISHPNHEAMWLWIMSVVCEVWFAL 78
            RPLTRKVG+SAAI+SPY             FLTWRI HPN EAMWLW MS+ CE+WF +
Sbjct: 261 RRPLTRKVGVSAAILSPYRLLIMIRLAALGLFLTWRIRHPNREAMWLWGMSITCELWFGV 320

Query: 77  SWLLDQLPKICPVNRVTDLSVLEDR 3
           SW+LDQLPK+CPVNRVTDLSVL+ R
Sbjct: 321 SWILDQLPKLCPVNRVTDLSVLKQR 345


>gb|AFZ78586.1| cellulose synthase-like protein [Populus tomentosa]
          Length = 1166

 Score =  339 bits (870), Expect = 5e-91
 Identities = 173/325 (53%), Positives = 212/325 (65%), Gaps = 15/325 (4%)
 Frame = -3

Query: 932  RFLSVSKDSV-----DDFVAYTVHIPSTPDNRIFXXXXXXXXXXXXXXXXXN--YIRDTV 774
            R+ S+S+D        DFV+YTVHIP TPD++ F                 +  +I  T+
Sbjct: 60   RYCSMSRDDATEENNSDFVSYTVHIPPTPDHQTFSASQSSLAEDIKNASKPDRSFISGTI 119

Query: 773  YTGGFNSETKAHVMSKWEDESEPVVKSKKLCAMDGCDEKLVDGVLRNNQCECGFRICRDC 594
            +TGGFNS T+ HV+    + +E + KS  +C M GCDEK + G     +CECGF+ICRDC
Sbjct: 120  FTGGFNSVTRGHVIDCSVENNESL-KSGLVCGMKGCDEKAIKG-----KCECGFKICRDC 173

Query: 593  YLDC-NSSGGGYCPGCKEPYNK-----DDTSDYEREEHNSEAKDQPNSLPRSRGVRLGKN 432
            YLDC  S+GGG C GCKEPY       +D  DY+ +E  SEA DQ   LP+     L K 
Sbjct: 174  YLDCVGSNGGGRCSGCKEPYKDVDDEAEDDDDYDYDEAKSEADDQALPLPK-----LDKR 228

Query: 431  FSLVQSFKAPNQ--DFDHTRWLFETNGTYGFGNAVWPREGYEFGRGTDGYENPPKFNERR 258
             SLV+SFKA +   DFDHTRWLFET GTYG+GNAVWP++GY  G G +G+E PP F ER 
Sbjct: 229  LSLVKSFKAQSHPPDFDHTRWLFETKGTYGYGNAVWPKDGYGAGSGANGFEPPPDFGERS 288

Query: 257  NRPLTRKVGISAAIISPYXXXXXXXXXXXVCFLTWRISHPNHEAMWLWIMSVVCEVWFAL 78
             RPLTRKVG+SAAI+SPY             FLTWRI HPN EAMWLW MS+ CE+WF +
Sbjct: 289  RRPLTRKVGVSAAILSPYRLLIMIRLAALGLFLTWRIRHPNREAMWLWGMSITCELWFGV 348

Query: 77   SWLLDQLPKICPVNRVTDLSVLEDR 3
            SW+LDQLPK+CPVNRVTDLSVL+ R
Sbjct: 349  SWILDQLPKLCPVNRVTDLSVLKQR 373


>ref|XP_002523143.1| Cellulose synthase A catalytic subunit 3 [UDP-forming], putative
           [Ricinus communis] gi|223537705|gb|EEF39328.1| Cellulose
           synthase A catalytic subunit 3 [UDP-forming], putative
           [Ricinus communis]
          Length = 1162

 Score =  338 bits (866), Expect = 1e-90
 Identities = 173/322 (53%), Positives = 208/322 (64%), Gaps = 12/322 (3%)
 Frame = -3

Query: 932 RFLSVSKDSV-----DDFVAYTVHIPSTPDNRIFXXXXXXXXXXXXXXXXXNYIRDTVYT 768
           R+ S+S+D        DFV YTVHIP TPD++                   ++I  T++T
Sbjct: 60  RYCSMSRDDTTEEINSDFVTYTVHIPPTPDHQPMSVSQSSLDIKNDGKPDRSFISGTIFT 119

Query: 767 GGFNSETKAHVMSKWEDESEPVVKSKKLCAMDGCDEKLVDGVLRNNQCECGFRICRDCYL 588
           GGFNS T+ HVM     E    +KS  +C M GCDEK + G     +CECGF+ICRDCYL
Sbjct: 120 GGFNSVTRGHVMD-CSMEMTKSLKSGLVCGMKGCDEKAIRG-----KCECGFKICRDCYL 173

Query: 587 DC-NSSGGGYCPGCKEPYNKDDTSDYEREEHNSEAK----DQPNSLPRSRGVRLGKNFSL 423
           DC  ++  G+CPGCKEPY   D  D++ EE + EAK    DQ   LP+     L K  SL
Sbjct: 174 DCVGANAVGHCPGCKEPYKDVDDEDFDDEEDDDEAKSEEEDQALPLPK-----LDKRLSL 228

Query: 422 VQSFKAPNQ--DFDHTRWLFETNGTYGFGNAVWPREGYEFGRGTDGYENPPKFNERRNRP 249
           V+S KA N   +FDHTRWLFET GTYG+GNAVWP++GY  G G + +E+PP F ER  RP
Sbjct: 229 VKSIKAMNHPPEFDHTRWLFETKGTYGYGNAVWPKDGYGGGSGANEFEHPPDFGERSRRP 288

Query: 248 LTRKVGISAAIISPYXXXXXXXXXXXVCFLTWRISHPNHEAMWLWIMSVVCEVWFALSWL 69
           LTRKVG+SAAI+SPY             FLTWRI HPN EAMWLW MS+ CEVWFALSWL
Sbjct: 289 LTRKVGVSAAILSPYRLLIAMRLAALGLFLTWRIRHPNREAMWLWGMSITCEVWFALSWL 348

Query: 68  LDQLPKICPVNRVTDLSVLEDR 3
           LDQLPK+CPVNRVTDLSVL+ R
Sbjct: 349 LDQLPKLCPVNRVTDLSVLKQR 370


>gb|ADQ28096.1| celullose synthase-like D protein [Gossypium hirsutum]
          Length = 1175

 Score =  334 bits (857), Expect = 2e-89
 Identities = 170/325 (52%), Positives = 210/325 (64%), Gaps = 15/325 (4%)
 Frame = -3

Query: 932  RFLSVSKDSV-------DDFVAYTVHIPSTPDNRIFXXXXXXXXXXXXXXXXXN----YI 786
            R+ S+S+D          +FV YTVHIP TPD++                        +I
Sbjct: 65   RYCSMSQDDPIPIEEINSEFVTYTVHIPPTPDHQSISTSQTSLNEEGKDGLKLKPERSFI 124

Query: 785  RDTVYTGGFNSETKAHVMSKWEDESEPVVKSKKLCAMDGCDEKLVDGVLRNNQCECGFRI 606
              T++TGG+N  T+ HV+    +  E  +KS  +C M GCDEK ++G     +CECGF+I
Sbjct: 125  SGTIFTGGYNCVTRGHVIDGSLERPE-TLKSGLVCGMKGCDEKEIEG-----KCECGFKI 178

Query: 605  CRDCYLDCNSSGGGYCPGCKEPYNKDDTSDYEREE--HNSEAKDQPNSLPRSRGVRLGKN 432
            C DCYLDC +SGGG+CPGCKEPY KD + D E +E   +SE  DQ   LP  R  +L K 
Sbjct: 179  CGDCYLDCVASGGGHCPGCKEPY-KDVSDDDEDDEVTSDSEEDDQALPLPSMRESKLDKR 237

Query: 431  FSLVQSFKAPNQ--DFDHTRWLFETNGTYGFGNAVWPREGYEFGRGTDGYENPPKFNERR 258
             SLV+SFK PN   DFDHTRWLFET GTYG+GNA+WP++GY  G G  G+ENPP F ER 
Sbjct: 238  LSLVKSFKGPNHPPDFDHTRWLFETKGTYGYGNALWPKDGY--GSGASGFENPPDFGERS 295

Query: 257  NRPLTRKVGISAAIISPYXXXXXXXXXXXVCFLTWRISHPNHEAMWLWIMSVVCEVWFAL 78
             RPLTRKVG+S AI+SPY             FLTWRI HPN +AMWLW MS+ CE+WFA 
Sbjct: 296  KRPLTRKVGVSPAILSPYRLLIILRLVALGFFLTWRIRHPNRDAMWLWGMSITCELWFAF 355

Query: 77   SWLLDQLPKICPVNRVTDLSVLEDR 3
            SWLLDQLPK+CPVNR+TDLSVL++R
Sbjct: 356  SWLLDQLPKLCPVNRITDLSVLKER 380


Top