BLASTX nr result

ID: Panax21_contig00039336 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00039336
         (596 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD33026.2| Cyclin-like F-box; FAR1; Zinc finger, SWIM-type [...   286   2e-75
ref|XP_003606229.1| FAR1-related protein [Medicago truncatula] g...   273   2e-71
gb|ABA95414.1| transposon protein, putative, unclassified [Oryza...   257   9e-67
gb|EEE52553.1| hypothetical protein OsJ_34801 [Oryza sativa Japo...   257   9e-67
ref|XP_003532941.1| PREDICTED: protein FAR1-RELATED SEQUENCE 6-l...   194   1e-47

>gb|ABD33026.2| Cyclin-like F-box; FAR1; Zinc finger, SWIM-type [Medicago truncatula]
          Length = 1116

 Score =  286 bits (732), Expect = 2e-75
 Identities = 130/198 (65%), Positives = 164/198 (82%)
 Frame = -3

Query: 594  KPRPKKYLGCKAKINASCCPDEKFTLTTVVLDHVNTLSLVKARYFRCHKQMDSYVKRRLE 415
            KP P     C A++N S   D K T+T V L+H + LS  K+RYFRC+K +D + KRRL+
Sbjct: 413  KPNPTIRAQCMARVNMSMSLDGKITITKVALEHNHGLSPTKSRYFRCNKNLDPHTKRRLD 472

Query: 414  LNDKAGIRISKNYKSIVIEAGGFEKLSFGEKDCRNHVDKARRLRLGVGGAKALRDYFVRM 235
            +ND+AGI +S+N++S+V+EA G++ L+FGEKDCRN++DKARRLRLG G A+A+++YFVRM
Sbjct: 473  INDQAGINVSRNFRSMVVEANGYDNLTFGEKDCRNYIDKARRLRLGTGDAEAIQNYFVRM 532

Query: 234  QEKDDRFYYVMDVDDSSQLRNVFWADARSRATCEYFGDVITFDTTYLTNKYDMPFAPFVG 55
            Q+K+ +FYYVMDVDD S+LRNVFW DAR RA  EYFG+VITFDTTYLTNKYDMPFAPFVG
Sbjct: 533  QKKNSQFYYVMDVDDKSRLRNVFWVDARCRAAYEYFGEVITFDTTYLTNKYDMPFAPFVG 592

Query: 54   VNHHGQSILLGCGLISNE 1
            VNHHGQS+LLGC L+SNE
Sbjct: 593  VNHHGQSVLLGCALLSNE 610


>ref|XP_003606229.1| FAR1-related protein [Medicago truncatula]
           gi|355507284|gb|AES88426.1| FAR1-related protein
           [Medicago truncatula]
          Length = 446

 Score =  273 bits (698), Expect = 2e-71
 Identities = 124/198 (62%), Positives = 159/198 (80%)
 Frame = -3

Query: 594 KPRPKKYLGCKAKINASCCPDEKFTLTTVVLDHVNTLSLVKARYFRCHKQMDSYVKRRLE 415
           KP P     C A++N     DEK  +T V L+H + LS  K+ YFRC+K +D + KRRL+
Sbjct: 59  KPNPIIRAQCMARVNMCQSLDEKIAITKVALEHSHELSPTKSIYFRCNKNLDPHTKRRLD 118

Query: 414 LNDKAGIRISKNYKSIVIEAGGFEKLSFGEKDCRNHVDKARRLRLGVGGAKALRDYFVRM 235
           +ND+AGI +S+N++ +V+EA G++ L+FGEKDCRN++DK RRLRLG+G  +A+++YFV M
Sbjct: 119 INDQAGINVSRNFRYMVVEANGYDNLTFGEKDCRNYMDKVRRLRLGIGDVEAIQNYFVIM 178

Query: 234 QEKDDRFYYVMDVDDSSQLRNVFWADARSRATCEYFGDVITFDTTYLTNKYDMPFAPFVG 55
           Q K+ +FYYVMDVDD S+LRNVFW DARSRAT EYFG++ITFDTTYLTNKYDMPFAPFVG
Sbjct: 179 QMKNSQFYYVMDVDDKSRLRNVFWVDARSRATYEYFGEIITFDTTYLTNKYDMPFAPFVG 238

Query: 54  VNHHGQSILLGCGLISNE 1
           VNHH QS+LLGC L+SNE
Sbjct: 239 VNHHSQSVLLGCALLSNE 256


>gb|ABA95414.1| transposon protein, putative, unclassified [Oryza sativa Japonica
           Group]
          Length = 862

 Score =  257 bits (657), Expect = 9e-67
 Identities = 121/198 (61%), Positives = 152/198 (76%)
 Frame = -3

Query: 594 KPRPKKYLGCKAKINASCCPDEKFTLTTVVLDHVNTLSLVKARYFRCHKQMDSYVKRRLE 415
           KP P     C AK+N     DEKF ++T+ LDH + +S  KAR+ RCHK++D   KRRLE
Sbjct: 85  KPNPSTRQQCPAKVNFYL-HDEKFCISTLTLDHNHVVSPSKARHLRCHKKLDLQAKRRLE 143

Query: 414 LNDKAGIRISKNYKSIVIEAGGFEKLSFGEKDCRNHVDKARRLRLGVGGAKALRDYFVRM 235
           LND+A IRI+KN+ S+V++AGG+E L FGEK+CRN++   R+L+LG G A A+  YF+RM
Sbjct: 144 LNDQARIRINKNFSSLVMQAGGYENLQFGEKECRNYLQDVRKLKLGAGDAHAVYQYFLRM 203

Query: 234 QEKDDRFYYVMDVDDSSQLRNVFWADARSRATCEYFGDVITFDTTYLTNKYDMPFAPFVG 55
             KD  F+YVMDVD+ S+L+NV W DARSRAT E F DV+TFDTTYLTNKY MPFAPFVG
Sbjct: 204 TSKDPNFFYVMDVDEDSRLKNVLWVDARSRATYESFSDVVTFDTTYLTNKYHMPFAPFVG 263

Query: 54  VNHHGQSILLGCGLISNE 1
           VNHHG+S+LLGC L+SNE
Sbjct: 264 VNHHGESVLLGCALLSNE 281


>gb|EEE52553.1| hypothetical protein OsJ_34801 [Oryza sativa Japonica Group]
          Length = 965

 Score =  257 bits (657), Expect = 9e-67
 Identities = 121/198 (61%), Positives = 152/198 (76%)
 Frame = -3

Query: 594 KPRPKKYLGCKAKINASCCPDEKFTLTTVVLDHVNTLSLVKARYFRCHKQMDSYVKRRLE 415
           KP P     C AK+N     DEKF ++T+ LDH + +S  KAR+ RCHK++D   KRRLE
Sbjct: 85  KPNPSTRQQCPAKVNFYL-HDEKFCISTLTLDHNHVVSPSKARHLRCHKKLDLQAKRRLE 143

Query: 414 LNDKAGIRISKNYKSIVIEAGGFEKLSFGEKDCRNHVDKARRLRLGVGGAKALRDYFVRM 235
           LND+A IRI+KN+ S+V++AGG+E L FGEK+CRN++   R+L+LG G A A+  YF+RM
Sbjct: 144 LNDQARIRINKNFSSLVMQAGGYENLQFGEKECRNYLQDVRKLKLGAGDAHAVYQYFLRM 203

Query: 234 QEKDDRFYYVMDVDDSSQLRNVFWADARSRATCEYFGDVITFDTTYLTNKYDMPFAPFVG 55
             KD  F+YVMDVD+ S+L+NV W DARSRAT E F DV+TFDTTYLTNKY MPFAPFVG
Sbjct: 204 TSKDPNFFYVMDVDEDSRLKNVLWVDARSRATYESFSDVVTFDTTYLTNKYHMPFAPFVG 263

Query: 54  VNHHGQSILLGCGLISNE 1
           VNHHG+S+LLGC L+SNE
Sbjct: 264 VNHHGESVLLGCALLSNE 281


>ref|XP_003532941.1| PREDICTED: protein FAR1-RELATED SEQUENCE 6-like [Glycine max]
          Length = 669

 Score =  194 bits (492), Expect = 1e-47
 Identities = 100/189 (52%), Positives = 130/189 (68%)
 Frame = -3

Query: 567 CKAKINASCCPDEKFTLTTVVLDHVNTLSLVKARYFRCHKQMDSYVKRRLELNDKAGIRI 388
           CKA+INA  C D K  + +V LDH + L   KAR  +  K+     KR+ +L++ AGI  
Sbjct: 102 CKARINACLCLDGKIRVLSVALDHNHELCPGKARLIKYTKKSKPQRKRKHDLSNLAGING 161

Query: 387 SKNYKSIVIEAGGFEKLSFGEKDCRNHVDKARRLRLGVGGAKALRDYFVRMQEKDDRFYY 208
             + +S  +EAG    L F +K+ R  + KA  LR   G A+A++ YFVRMQ+ +  FYY
Sbjct: 162 DGSIQSPGVEAGEHGSLGFFDKNRRIFIQKASSLRFESGDAEAIQSYFVRMQKINSSFYY 221

Query: 207 VMDVDDSSQLRNVFWADARSRATCEYFGDVITFDTTYLTNKYDMPFAPFVGVNHHGQSIL 28
           VMD+DD  +LRNVFWADARS+A  EYFGDV+TFDTTYLTNKY++P A F+GVNHHGQS+L
Sbjct: 222 VMDLDDDCRLRNVFWADARSKAANEYFGDVVTFDTTYLTNKYNIPLALFLGVNHHGQSVL 281

Query: 27  LGCGLISNE 1
           LG  L+SNE
Sbjct: 282 LGIALLSNE 290


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