BLASTX nr result

ID: Panax21_contig00039324 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00039324
         (482 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29503.3| unnamed protein product [Vitis vinifera]              183   1e-44
ref|XP_002304294.1| predicted protein [Populus trichocarpa] gi|2...   172   3e-41
ref|XP_002531465.1| conserved hypothetical protein [Ricinus comm...   168   4e-40
ref|XP_002326661.1| predicted protein [Populus trichocarpa] gi|2...   168   4e-40
ref|XP_003608671.1| Glycoprotein-like protein [Medicago truncatu...   135   3e-30

>emb|CBI29503.3| unnamed protein product [Vitis vinifera]
          Length = 386

 Score =  183 bits (465), Expect = 1e-44
 Identities = 89/119 (74%), Positives = 102/119 (85%)
 Frame = -2

Query: 358 TTKIQENHPNPSKFYTHFLYKAVIVSIFVLVLPLFPSQAPEFINQTLHTRSWELLQLIFV 179
           T+   +N  NPSKFY+ FLYKA+IV++F+ +LPLFPSQAPEFINQT+  RSWELL L+FV
Sbjct: 4   TSTTPQNQANPSKFYSGFLYKALIVTLFLAILPLFPSQAPEFINQTVFNRSWELLHLVFV 63

Query: 178 GIAVSYGLFSKRNDETEKEYISKFDNAHSYVSRLLQVSSVFDDETESPSGTYESKVHTW 2
           GIAVSYGLFS+RNDETEKE  SKFDNA SYVSR LQVSSVFD+E ESPSG+ ESKV TW
Sbjct: 64  GIAVSYGLFSRRNDETEKENHSKFDNAQSYVSRFLQVSSVFDEEVESPSGSGESKVQTW 122


>ref|XP_002304294.1| predicted protein [Populus trichocarpa] gi|222841726|gb|EEE79273.1|
           predicted protein [Populus trichocarpa]
          Length = 580

 Score =  172 bits (436), Expect = 3e-41
 Identities = 84/120 (70%), Positives = 99/120 (82%), Gaps = 5/120 (4%)
 Frame = -2

Query: 346 QENHPNPSKFYTHFLYKAVIVSIFVLVLPLFPSQAPEFINQTLHTRSWELLQLIFVGIAV 167
           Q+   NP+K+YTHFLYKA+IV++F+++LPLFPSQAPEFINQTL+TR WE L L+FVGIAV
Sbjct: 12  QQKQANPTKYYTHFLYKALIVTVFLIILPLFPSQAPEFINQTLNTRGWEFLHLVFVGIAV 71

Query: 166 SYGLFSKRNDETEKE-----YISKFDNAHSYVSRLLQVSSVFDDETESPSGTYESKVHTW 2
           SYGLFSKRNDETEKE       SKFDNA SYVSR LQVSSVFDD+ +S   + E+KV TW
Sbjct: 72  SYGLFSKRNDETEKENNNSSNQSKFDNAQSYVSRFLQVSSVFDDDVDSSPKSGETKVQTW 131


>ref|XP_002531465.1| conserved hypothetical protein [Ricinus communis]
           gi|223528919|gb|EEF30915.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 565

 Score =  168 bits (426), Expect = 4e-40
 Identities = 85/118 (72%), Positives = 99/118 (83%), Gaps = 5/118 (4%)
 Frame = -2

Query: 340 NHPNPSKFYTHFLYKAVIVSIFVLVLPLFPSQAPEFINQTLHTRSWELLQLIFVGIAVSY 161
           N+ NPSKFY+HFLYKA+IV+IF+++LPLFPSQAPEFINQTL+TR WE L LIFVGIAVSY
Sbjct: 19  NNNNPSKFYSHFLYKALIVTIFLVILPLFPSQAPEFINQTLNTRGWEFLHLIFVGIAVSY 78

Query: 160 GLFSKRNDETEKEYI--SKFDNAHSYVSRLLQVSSVFDDETESPSG---TYESKVHTW 2
           GLFS+RNDETEK+    SKFDNA SYVSR LQVSSVFDD+ +SPS    +  + V TW
Sbjct: 79  GLFSRRNDETEKDNSSNSKFDNAQSYVSRFLQVSSVFDDDADSPSKSDVSNSTSVQTW 136


>ref|XP_002326661.1| predicted protein [Populus trichocarpa] gi|222833983|gb|EEE72460.1|
           predicted protein [Populus trichocarpa]
          Length = 563

 Score =  168 bits (426), Expect = 4e-40
 Identities = 84/123 (68%), Positives = 102/123 (82%), Gaps = 5/123 (4%)
 Frame = -2

Query: 355 TKIQE-NHPNPSKFYTHFLYKAVIVSIFVLVLPLFPSQAPEFINQTLHTRSWELLQLIFV 179
           TK Q+    NP+K+YT+FLYKA+IV+IF+++L LFPSQAPEF+NQTL+TR WE L+L+FV
Sbjct: 8   TKYQQLKQANPTKYYTNFLYKALIVTIFLIILQLFPSQAPEFLNQTLNTRGWEFLRLVFV 67

Query: 178 GIAVSYGLFSKRNDETEKEY----ISKFDNAHSYVSRLLQVSSVFDDETESPSGTYESKV 11
           GIAVSYGLFS+RNDETEKE      S+FDNA SYVSR LQVSSVFDDE +SP  + E+KV
Sbjct: 68  GIAVSYGLFSRRNDETEKEINNSNPSRFDNAQSYVSRFLQVSSVFDDEVDSPPESEETKV 127

Query: 10  HTW 2
            TW
Sbjct: 128 QTW 130


>ref|XP_003608671.1| Glycoprotein-like protein [Medicago truncatula]
           gi|355509726|gb|AES90868.1| Glycoprotein-like protein
           [Medicago truncatula]
          Length = 483

 Score =  135 bits (341), Expect = 3e-30
 Identities = 69/131 (52%), Positives = 93/131 (70%), Gaps = 5/131 (3%)
 Frame = -2

Query: 379 SKPQRVATTKIQENHPNPSKFYTHFLYKAVIVSIFVLVLPLFPSQAPEFINQTLHTRSWE 200
           +K Q+     +++N   P+KF+ +F YKA IV IF ++LPL PSQAPEFI+Q L TR+WE
Sbjct: 10  TKHQKPTLDNVKQNQQEPNKFHYNFAYKATIVLIFFVILPLLPSQAPEFISQNLLTRNWE 69

Query: 199 LLQLIFVGIAVSYGLFSKRNDETEKE--YISKFDNAHSYVSRLLQVSSVFDDETESPSGT 26
           LL L+FVGIA+SYGLFS+RN E +K+    +KFDNA S VSR LQVSS F+DE +  + +
Sbjct: 70  LLHLLFVGIAISYGLFSRRNQEPDKDNNNNTKFDNAQSLVSRFLQVSSFFEDEVDHQNQS 129

Query: 25  YE---SKVHTW 2
                +K+ TW
Sbjct: 130 ESEDINKIQTW 140


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