BLASTX nr result

ID: Panax21_contig00039319 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00039319
         (429 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002332537.1| predicted protein [Populus trichocarpa] gi|2...    88   6e-16
ref|XP_002332212.1| predicted protein [Populus trichocarpa] gi|2...    88   8e-16
ref|XP_002331745.1| predicted protein [Populus trichocarpa] gi|2...    87   1e-15
ref|XP_002333406.1| predicted protein [Populus trichocarpa] gi|2...    87   1e-15
ref|XP_002331734.1| predicted protein [Populus trichocarpa] gi|2...    85   1e-15

>ref|XP_002332537.1| predicted protein [Populus trichocarpa] gi|222832547|gb|EEE71024.1|
           predicted protein [Populus trichocarpa]
          Length = 427

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 55/120 (45%), Positives = 63/120 (52%), Gaps = 7/120 (5%)
 Frame = -1

Query: 351 RKWMF--NYDSH*NGRIWVGWNPAMWKVDVFFVSSQLIHCKARKLHCNDNEFLVSFAYGL 178
           R W F  NYD    GRIWV WN    KVDVF +S Q IH     L   D  F  S  YG 
Sbjct: 243 RSWSFLYNYDFSCRGRIWVCWNADTVKVDVFGMSDQAIHVSVTIL-ATDISFNTSIIYGD 301

Query: 177 NTCLERRELWRDLVSLS---SSQPWCLLGDFNAIKCLNETDRT--DDTWDSSMEDFKTCI 13
           N    R  LW D+VS S    S PW L+GDFNAI+  N++DR     TW  +M+   TCI
Sbjct: 302 NNASLREALWSDIVSRSDGWESTPWILMGDFNAIR--NQSDRLGGSTTWAGTMDRLDTCI 359


>ref|XP_002332212.1| predicted protein [Populus trichocarpa] gi|222874876|gb|EEF12007.1|
           predicted protein [Populus trichocarpa]
          Length = 603

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 55/120 (45%), Positives = 65/120 (54%), Gaps = 7/120 (5%)
 Frame = -1

Query: 351 RKWMF--NYDSH*NGRIWVGWNPAMWKVDVFFVSSQLIHCKARKLHCNDNEFLVSFAYGL 178
           R W F  NYD   +GRIWV WN    KVDVF +S Q IH     L  N + F  S  YG 
Sbjct: 370 RSWSFLYNYDFSCHGRIWVCWNADTVKVDVFGMSDQAIHVSVTILATNIS-FNTSIIYGD 428

Query: 177 NTCLERRELWRDLVSLS---SSQPWCLLGDFNAIKCLNETDRT--DDTWDSSMEDFKTCI 13
           N    R  LW D+VS S    S PW L+GDFNAI+  N++DR     TW  +M+   TCI
Sbjct: 429 NNASLREALWSDIVSRSDGWESTPWILMGDFNAIR--NQSDRLGGSTTWAGTMDRLDTCI 486


>ref|XP_002331745.1| predicted protein [Populus trichocarpa] gi|222874271|gb|EEF11402.1|
           predicted protein [Populus trichocarpa]
          Length = 317

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 55/120 (45%), Positives = 64/120 (53%), Gaps = 7/120 (5%)
 Frame = -1

Query: 351 RKWMF--NYDSH*NGRIWVGWNPAMWKVDVFFVSSQLIHCKARKLHCNDNEFLVSFAYGL 178
           R W F  NYD    GRIWV WN    KVDVF +S Q IH     L  N + F  S  YG 
Sbjct: 169 RSWSFLYNYDFSCRGRIWVCWNADTVKVDVFGMSDQAIHVSVTILATNIS-FNTSIIYGD 227

Query: 177 NTCLERRELWRDLVSLS---SSQPWCLLGDFNAIKCLNETDRT--DDTWDSSMEDFKTCI 13
           N    R  LW D+VS S    S PW L+GDFNAI+  N++DR     TW  +M+   TCI
Sbjct: 228 NNASLREALWSDIVSRSDGWESTPWILMGDFNAIR--NQSDRLGGSTTWAGTMDRLDTCI 285


>ref|XP_002333406.1| predicted protein [Populus trichocarpa] gi|222836432|gb|EEE74839.1|
           predicted protein [Populus trichocarpa]
          Length = 1166

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 55/120 (45%), Positives = 64/120 (53%), Gaps = 7/120 (5%)
 Frame = -1

Query: 351 RKWMF--NYDSH*NGRIWVGWNPAMWKVDVFFVSSQLIHCKARKLHCNDNEFLVSFAYGL 178
           R W F  NYD    GRIWV WN    KVDVF +S Q IH     L  N + F  S  YG 
Sbjct: 577 RSWSFLYNYDFSCRGRIWVCWNADTVKVDVFGMSDQAIHVSVTILATNIS-FNTSIIYGD 635

Query: 177 NTCLERRELWRDLVSLS---SSQPWCLLGDFNAIKCLNETDRT--DDTWDSSMEDFKTCI 13
           N    R  LW D+VS S    S PW L+GDFNAI+  N++DR     TW  +M+   TCI
Sbjct: 636 NNASLREALWSDIVSRSDGWESTPWILMGDFNAIR--NQSDRLGGSTTWAGTMDRLDTCI 693


>ref|XP_002331734.1| predicted protein [Populus trichocarpa] gi|222874137|gb|EEF11268.1|
           predicted protein [Populus trichocarpa]
          Length = 557

 Score = 85.1 bits (209), Expect(2) = 1e-15
 Identities = 54/120 (45%), Positives = 63/120 (52%), Gaps = 7/120 (5%)
 Frame = -1

Query: 351 RKWMF--NYDSH*NGRIWVGWNPAMWKVDVFFVSSQLIHCKARKLHCNDNEFLVSFAYGL 178
           R W F  NYD    GRIWV WN    KVDVF +S Q  H     L  N + F  S  YG 
Sbjct: 334 RSWSFLYNYDFSCRGRIWVCWNADTVKVDVFGMSDQASHVSVTILATNIS-FNTSIIYGD 392

Query: 177 NTCLERRELWRDLVSLS---SSQPWCLLGDFNAIKCLNETDRT--DDTWDSSMEDFKTCI 13
           N    R  LW D+VS S    S PW L+GDFNAI+  N++DR     TW  +M+   TCI
Sbjct: 393 NNASLREALWSDIVSRSDGWKSTPWILMGDFNAIR--NQSDRLGGSTTWADTMDRLDTCI 450



 Score = 22.3 bits (46), Expect(2) = 1e-15
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -2

Query: 425 GLLETRVKEHKASRISK 375
           GL+ETRVKE     +S+
Sbjct: 314 GLVETRVKEKNKDNVSQ 330


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