BLASTX nr result

ID: Panax21_contig00039308 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00039308
         (886 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001235341.1| dehydration-responsive element binding prote...   136   6e-30
ref|XP_002334238.1| AP2/ERF domain-containing transcription fact...   134   3e-29
ref|XP_002327006.1| AP2/ERF domain-containing transcription fact...   134   3e-29
ref|XP_002301249.1| AP2/ERF domain-containing transcription fact...   132   1e-28
ref|XP_002303364.1| AP2/ERF domain-containing transcription fact...   132   1e-28

>ref|NP_001235341.1| dehydration-responsive element binding protein 6 [Glycine max]
           gi|146552062|gb|ABQ42205.1| dehydration-responsive
           element binding protein 6 [Glycine max]
          Length = 230

 Score =  136 bits (343), Expect = 6e-30
 Identities = 73/139 (52%), Positives = 88/139 (63%)
 Frame = -1

Query: 589 KGKEGNDNDGKHPIYRGVRRRSWGKWVSEIREPRKKSRIWLGTFATPEMXXXXXXXXXXA 410
           K K+ N N+GKHP YRGVR R WGKWVSEIREPRKKSRIWLGTF TP+M           
Sbjct: 45  KKKKANSNEGKHPTYRGVRMRQWGKWVSEIREPRKKSRIWLGTFPTPDMAARAHDVAALT 104

Query: 409 IKGRSAFLNFPDSAHQLPQPASKSPKDIQXXXXXXXXXATDTNPTSHEAETEAELRQAEA 230
           IKG SA+LNFP+ A +LP+PAS SPKDIQ         A D    SH+AE+E   R   +
Sbjct: 105 IKGSSAYLNFPELADELPRPASTSPKDIQ--AAAAKAAALDFGHRSHDAESELS-RAVSS 161

Query: 229 SVRCDDSSRESSTSPVSHI 173
           S+    SS  S++S +  +
Sbjct: 162 SILTQASSSSSNSSSLKGV 180


>ref|XP_002334238.1| AP2/ERF domain-containing transcription factor [Populus
           trichocarpa] gi|148372081|gb|ABQ62972.1| TINY-like
           protein [Populus trichocarpa]
           gi|222870106|gb|EEF07237.1| AP2/ERF domain-containing
           transcription factor [Populus trichocarpa]
          Length = 269

 Score =  134 bits (337), Expect = 3e-29
 Identities = 82/185 (44%), Positives = 108/185 (58%), Gaps = 9/185 (4%)
 Frame = -1

Query: 700 KTALATRKGTKRSVLLLDDHDQEGQNANDNQVIMIINKGKEG--NDNDGKHPIYRGVRRR 527
           + ++A  KG+++S        QE Q+ N+       NK ++   N+N+GKHP YRGVR R
Sbjct: 52  ENSIADLKGSRKS--------QELQSGNEG------NKKRKTTRNENNGKHPTYRGVRMR 97

Query: 526 SWGKWVSEIREPRKKSRIWLGTFATPEMXXXXXXXXXXAIKGRSAFLNFPDSAHQLPQPA 347
           SWGKWV EIREPRKKSRIWLGT+ T EM          AIKG SA+LNFP+   +LP+P 
Sbjct: 98  SWGKWVCEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGGSAYLNFPELVDELPRPL 157

Query: 346 SKSPKDIQ-XXXXXXXXXATDTNPTSHEAETEAELRQAEASVR------CDDSSRESSTS 188
           SKSPKDIQ            +T     EAE EA++  AE +V         D+ +ESS+S
Sbjct: 158 SKSPKDIQAAAAKAAAASFPETRHCEAEAEAEADMSHAELNVSNLSDNLAMDNIQESSSS 217

Query: 187 PVSHI 173
           P + +
Sbjct: 218 PSTDV 222


>ref|XP_002327006.1| AP2/ERF domain-containing transcription factor [Populus
           trichocarpa] gi|148372083|gb|ABQ62973.1| TINY-like
           protein [Populus trichocarpa]
           gi|222835321|gb|EEE73756.1| AP2/ERF domain-containing
           transcription factor [Populus trichocarpa]
          Length = 269

 Score =  134 bits (337), Expect = 3e-29
 Identities = 82/185 (44%), Positives = 108/185 (58%), Gaps = 9/185 (4%)
 Frame = -1

Query: 700 KTALATRKGTKRSVLLLDDHDQEGQNANDNQVIMIINKGKEG--NDNDGKHPIYRGVRRR 527
           + ++A  KG+++S        QE Q+ N+       NK ++   N+N+GKHP YRGVR R
Sbjct: 52  ENSIADPKGSRKS--------QELQSGNEG------NKKRKTTRNENNGKHPTYRGVRMR 97

Query: 526 SWGKWVSEIREPRKKSRIWLGTFATPEMXXXXXXXXXXAIKGRSAFLNFPDSAHQLPQPA 347
           SWGKWV EIREPRKKSRIWLGT+ T EM          AIKG SA+LNFP+   +LP+P 
Sbjct: 98  SWGKWVCEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGGSAYLNFPELVDELPRPL 157

Query: 346 SKSPKDIQ-XXXXXXXXXATDTNPTSHEAETEAELRQAEASVR------CDDSSRESSTS 188
           SKSPKDIQ            +T     EAE EA++  AE +V         D+ +ESS+S
Sbjct: 158 SKSPKDIQAAAAKAAAASFPETRHCEAEAEAEADMSHAELNVSNLSDNLAMDNIQESSSS 217

Query: 187 PVSHI 173
           P + +
Sbjct: 218 PSTDV 222


>ref|XP_002301249.1| AP2/ERF domain-containing transcription factor [Populus
           trichocarpa] gi|148372085|gb|ABQ62974.1| TINY-like
           protein [Populus trichocarpa]
           gi|222842975|gb|EEE80522.1| AP2/ERF domain-containing
           transcription factor [Populus trichocarpa]
          Length = 272

 Score =  132 bits (332), Expect = 1e-28
 Identities = 73/132 (55%), Positives = 85/132 (64%), Gaps = 2/132 (1%)
 Frame = -1

Query: 574 NDNDGKHPIYRGVRRRSWGKWVSEIREPRKKSRIWLGTFATPEMXXXXXXXXXXAIKGRS 395
           N+ +GKHP YRGVR RSWGKWVSEIREPRKKSRIWLGT+ T EM          AIKG S
Sbjct: 90  NEKNGKHPTYRGVRMRSWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGGS 149

Query: 394 AFLNFPDSAHQLPQPASKSPKDIQ-XXXXXXXXXATDTNPTSHEAETEAELRQAEAS-VR 221
           A+LNFP+ AH+LP P SKSPKDIQ           T+T     E   EAEL  +  S   
Sbjct: 150 AYLNFPEFAHELPPPLSKSPKDIQAAAAKAAAASFTETRYCEGEGGGEAELNVSNLSDSL 209

Query: 220 CDDSSRESSTSP 185
             D+++ESS+SP
Sbjct: 210 AMDNTQESSSSP 221


>ref|XP_002303364.1| AP2/ERF domain-containing transcription factor [Populus
           trichocarpa] gi|148372077|gb|ABQ62970.1| TINY-like
           protein [Populus trichocarpa]
           gi|222840796|gb|EEE78343.1| AP2/ERF domain-containing
           transcription factor [Populus trichocarpa]
          Length = 225

 Score =  132 bits (332), Expect = 1e-28
 Identities = 67/140 (47%), Positives = 86/140 (61%), Gaps = 3/140 (2%)
 Frame = -1

Query: 592 NKGKEGNDNDGKHPIYRGVRRRSWGKWVSEIREPRKKSRIWLGTFATPEMXXXXXXXXXX 413
           +K  +   N G+HP YRGVR R WGKWVSEIR+P+KKSRIWLGTF+TPEM          
Sbjct: 25  DKQAKRRGNAGRHPSYRGVRMRQWGKWVSEIRQPKKKSRIWLGTFSTPEMAARAHDVAAL 84

Query: 412 AIKGRSAFLNFPDSAHQLPQPASKSPKDIQXXXXXXXXXATDTNPTSHEAETEAEL---R 242
            IKG SA LNFP+ AH+ P+PAS SPKDIQ         +  T+    E E EAEL   R
Sbjct: 85  TIKGHSAHLNFPELAHEFPRPASSSPKDIQAAAALAATLSCKTSQKGRETEAEAELMLPR 144

Query: 241 QAEASVRCDDSSRESSTSPV 182
             ++++  +++   S  SP+
Sbjct: 145 SLDSTLASNETQEYSLNSPL 164


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