BLASTX nr result

ID: Panax21_contig00039301 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00039301
         (549 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002963045.1| hypothetical protein SELMODRAFT_404578 [Sela...    82   7e-14
gb|ADE77118.1| unknown [Picea sitchensis]                              73   3e-11
ref|YP_001550173.1| hypothetical protein P9211_02881 [Prochloroc...    70   2e-10
ref|YP_292818.1| virulence factor MVIN-like [Prochlorococcus mar...    68   8e-10
ref|YP_003136844.1| integral membrane protein MviN [Cyanothece s...    68   1e-09

>ref|XP_002963045.1| hypothetical protein SELMODRAFT_404578 [Selaginella moellendorffii]
           gi|300169906|gb|EFJ36508.1| hypothetical protein
           SELMODRAFT_404578 [Selaginella moellendorffii]
          Length = 148

 Score = 81.6 bits (200), Expect = 7e-14
 Identities = 42/94 (44%), Positives = 59/94 (62%), Gaps = 1/94 (1%)
 Frame = -2

Query: 281 GLLREIVMAAVFGVGPVAIAFKYAYVLPGFAASLLGGVNGPIHVTMATT-XXXXXXXXXX 105
           GL+RE+V+AAVFGVGPV  AF+YA ++PGF   +LGG+NGPIH+ M +            
Sbjct: 37  GLVRELVLAAVFGVGPVVDAFRYASIVPGFFLIILGGINGPIHIAMVSALSKIAEEDRKR 96

Query: 104 XLFQHTNAVMFLMGGALGVLVFVSAEFIIHIYAP 3
            L   T+  MF++   LG+L++  A F+I   AP
Sbjct: 97  ELIGRTSHAMFVISLGLGILMYTLAAFLIDAIAP 130


>gb|ADE77118.1| unknown [Picea sitchensis]
          Length = 223

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 34/71 (47%), Positives = 47/71 (66%)
 Frame = -2

Query: 281 GLLREIVMAAVFGVGPVAIAFKYAYVLPGFAASLLGGVNGPIHVTMATTXXXXXXXXXXX 102
           GLLRE V+AA FG+GPV  +F YA ++P F  SLLGG+NGP+H+T+ TT           
Sbjct: 142 GLLRETVLAAAFGIGPVTTSFNYASIIPAFFISLLGGINGPLHMTITTTLSKHSKEEGIQ 201

Query: 101 LFQHTNAVMFL 69
           L +  ++V+FL
Sbjct: 202 LIEKASSVIFL 212


>ref|YP_001550173.1| hypothetical protein P9211_02881 [Prochlorococcus marinus str. MIT
           9211] gi|159888005|gb|ABX08219.1| Uncharacterized
           membrane protein, putative virulence factor
           [Prochlorococcus marinus str. MIT 9211]
          Length = 535

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 32/93 (34%), Positives = 55/93 (59%)
 Frame = -2

Query: 281 GLLREIVMAAVFGVGPVAIAFKYAYVLPGFAASLLGGVNGPIHVTMATTXXXXXXXXXXX 102
           GL+R++V+A  FGVG    A+ YAYV+PGF   L+GG+NGP+H ++ T            
Sbjct: 23  GLIRQLVVAGAFGVGAAYDAYNYAYVIPGFFLILIGGINGPLHNSIVTVLSRSSKKEKAY 82

Query: 101 LFQHTNAVMFLMGGALGVLVFVSAEFIIHIYAP 3
           +    N ++ L+   + +++F++A+ II +  P
Sbjct: 83  ILSSINTLISLLLIIISIILFIAADPIIKVIGP 115


>ref|YP_292818.1| virulence factor MVIN-like [Prochlorococcus marinus str. NATL2A]
           gi|72003313|gb|AAZ59115.1| virulence factor MVIN-like
           protein [Prochlorococcus marinus str. NATL2A]
          Length = 535

 Score = 68.2 bits (165), Expect = 8e-10
 Identities = 30/93 (32%), Positives = 52/93 (55%)
 Frame = -2

Query: 281 GLLREIVMAAVFGVGPVAIAFKYAYVLPGFAASLLGGVNGPIHVTMATTXXXXXXXXXXX 102
           GL R++V+A  FG+     A+ YAY++PGF   LLGG+NGP+H +M T            
Sbjct: 23  GLARQLVIAGAFGINAAYDAYNYAYIIPGFFLVLLGGINGPLHNSMVTLLADKNKVESRL 82

Query: 101 LFQHTNAVMFLMGGALGVLVFVSAEFIIHIYAP 3
                N ++ ++   + + +F S++F+I++  P
Sbjct: 83  FISSINNILSIILLIISLFIFFSSDFLINLVGP 115


>ref|YP_003136844.1| integral membrane protein MviN [Cyanothece sp. PCC 8802]
           gi|256589122|gb|ACV00009.1| integral membrane protein
           MviN [Cyanothece sp. PCC 8802]
          Length = 533

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 36/93 (38%), Positives = 51/93 (54%)
 Frame = -2

Query: 281 GLLREIVMAAVFGVGPVAIAFKYAYVLPGFAASLLGGVNGPIHVTMATTXXXXXXXXXXX 102
           GL+RE V+AA FGVGPV  A+ YAYV+PGF   LLGG+NGP H  + +            
Sbjct: 29  GLVREQVIAAAFGVGPVVNAYAYAYVIPGFLLILLGGINGPFHSALVSVLAKRDKSEAAP 88

Query: 101 LFQHTNAVMFLMGGALGVLVFVSAEFIIHIYAP 3
           L +    ++ L    + V++ + A   I + AP
Sbjct: 89  LVETVTTLVSLFLLIITVILIIFAGIFIDLLAP 121


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