BLASTX nr result

ID: Panax21_contig00039298 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00039298
         (356 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631633.1| PREDICTED: uncharacterized protein LOC100852...   134   6e-30
emb|CAN70933.1| hypothetical protein VITISV_032482 [Vitis vinifera]   134   6e-30
ref|XP_004148855.1| PREDICTED: mediator of RNA polymerase II tra...   121   5e-26
ref|XP_002305420.1| predicted protein [Populus trichocarpa] gi|2...   120   1e-25
ref|NP_001238652.1| uncharacterized protein LOC100306169 [Glycin...   115   4e-24

>ref|XP_003631633.1| PREDICTED: uncharacterized protein LOC100852787 [Vitis vinifera]
          Length = 145

 Score =  134 bits (338), Expect = 6e-30
 Identities = 71/88 (80%), Positives = 71/88 (80%)
 Frame = -1

Query: 266 IVDALNTXXXXXXXXXXXXXXAKESSGGQKTAATDAALENFKQRWELFRVACDQAEEFVE 87
           IVDALN               AKESSG QKTAATDAALENFKQRWELFRVACDQAEEFVE
Sbjct: 4   IVDALNNAYQEFVSAAASVLEAKESSGAQKTAATDAALENFKQRWELFRVACDQAEEFVE 63

Query: 86  SVKQRIGSECLVDEATGSVTGKPGQAVT 3
           SVKQRIGSECLVDEATGSV GKPGQAVT
Sbjct: 64  SVKQRIGSECLVDEATGSVAGKPGQAVT 91


>emb|CAN70933.1| hypothetical protein VITISV_032482 [Vitis vinifera]
          Length = 145

 Score =  134 bits (338), Expect = 6e-30
 Identities = 71/88 (80%), Positives = 71/88 (80%)
 Frame = -1

Query: 266 IVDALNTXXXXXXXXXXXXXXAKESSGGQKTAATDAALENFKQRWELFRVACDQAEEFVE 87
           IVDALN               AKESSG QKTAATDAALENFKQRWELFRVACDQAEEFVE
Sbjct: 4   IVDALNNAYQEFVSAAASVLEAKESSGAQKTAATDAALENFKQRWELFRVACDQAEEFVE 63

Query: 86  SVKQRIGSECLVDEATGSVTGKPGQAVT 3
           SVKQRIGSECLVDEATGSV GKPGQAVT
Sbjct: 64  SVKQRIGSECLVDEATGSVAGKPGQAVT 91


>ref|XP_004148855.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           32-like [Cucumis sativus]
           gi|449515353|ref|XP_004164714.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 32-like [Cucumis
           sativus]
          Length = 146

 Score =  121 bits (304), Expect = 5e-26
 Identities = 62/88 (70%), Positives = 68/88 (77%)
 Frame = -1

Query: 266 IVDALNTXXXXXXXXXXXXXXAKESSGGQKTAATDAALENFKQRWELFRVACDQAEEFVE 87
           +VD+LN               A E+SG QKTAATDAALENFKQ+WELFRVACDQAEEFVE
Sbjct: 4   LVDSLNNAYQEFVAGAANVLEANEASGAQKTAATDAALENFKQKWELFRVACDQAEEFVE 63

Query: 86  SVKQRIGSECLVDEATGSVTGKPGQAVT 3
           SVKQRIGSECLVDEATGS+ GK GQ+ T
Sbjct: 64  SVKQRIGSECLVDEATGSLAGKSGQSAT 91


>ref|XP_002305420.1| predicted protein [Populus trichocarpa] gi|222848384|gb|EEE85931.1|
           predicted protein [Populus trichocarpa]
          Length = 146

 Score =  120 bits (301), Expect = 1e-25
 Identities = 61/85 (71%), Positives = 67/85 (78%)
 Frame = -1

Query: 266 IVDALNTXXXXXXXXXXXXXXAKESSGGQKTAATDAALENFKQRWELFRVACDQAEEFVE 87
           IVD+LN               AKE SGGQKTAATD ALENFKQ+WELFRV+CDQAEEFVE
Sbjct: 4   IVDSLNNAYQDFVGAAANVLEAKELSGGQKTAATDVALENFKQKWELFRVSCDQAEEFVE 63

Query: 86  SVKQRIGSECLVDEATGSVTGKPGQ 12
           SVKQR+GSECLVDEATGSV+G+ GQ
Sbjct: 64  SVKQRVGSECLVDEATGSVSGRSGQ 88


>ref|NP_001238652.1| uncharacterized protein LOC100306169 [Glycine max]
           gi|255627755|gb|ACU14222.1| unknown [Glycine max]
           gi|255633285|gb|ACU16999.1| unknown [Glycine max]
          Length = 146

 Score =  115 bits (288), Expect = 4e-24
 Identities = 60/86 (69%), Positives = 64/86 (74%)
 Frame = -1

Query: 266 IVDALNTXXXXXXXXXXXXXXAKESSGGQKTAATDAALENFKQRWELFRVACDQAEEFVE 87
           IVD+LN               AKE++G  KT ATD ALENFKQ+WELFRVACDQAEEFVE
Sbjct: 4   IVDSLNNAYQDFVVAAANVLEAKENAGSIKTTATDTALENFKQKWELFRVACDQAEEFVE 63

Query: 86  SVKQRIGSECLVDEATGSVTGKPGQA 9
           SVKQRIGSECLVDEAT  V GKPGQA
Sbjct: 64  SVKQRIGSECLVDEATRPVAGKPGQA 89


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