BLASTX nr result

ID: Panax21_contig00039295 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00039295
         (538 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277896.1| PREDICTED: E3 ubiquitin-protein ligase Os04g...   177   7e-43
emb|CAN78205.1| hypothetical protein VITISV_014334 [Vitis vinifera]   172   4e-41
ref|XP_004136192.1| PREDICTED: E3 ubiquitin-protein ligase Os04g...   139   3e-31
ref|XP_003517045.1| PREDICTED: E3 ubiquitin-protein ligase Os04g...   131   7e-29
gb|ACU17851.1| unknown [Glycine max]                                  129   4e-28

>ref|XP_002277896.1| PREDICTED: E3 ubiquitin-protein ligase Os04g0590900-like [Vitis
           vinifera]
          Length = 375

 Score =  177 bits (450), Expect = 7e-43
 Identities = 97/186 (52%), Positives = 115/186 (61%), Gaps = 11/186 (5%)
 Frame = +1

Query: 1   LRSHSNCPLCRANIAHVNALPLQLPPPVTESPASNEIFSHGHRESTNI------DTDVGE 162
           L+SHSNCPLCRANI      P QLPPPV ESP +NE       E  N+      +    E
Sbjct: 174 LKSHSNCPLCRANIVPTTVSPTQLPPPVMESPLNNEPSQQSQLEHENVAVGEDLERVAEE 233

Query: 163 EEIMQGDSVPKTPTRALSDLGNSEQRDTIIEIREVEYQHIRRSVSMSNLCQNQVSIA--- 333
           EEIM+ + +PKTP+R  SDLGNSE+RDTIIEIR+   Q IRRS+S+   CQ ++S+A   
Sbjct: 234 EEIMRNEVIPKTPSRVFSDLGNSEERDTIIEIRDEGEQQIRRSISLDYSCQTRLSVADIL 293

Query: 334 --XXXXXXXXXXXXXXXXGDVGSSKMRVAEMSKCSHRNRVLHCVASPVGMKRSFSSGRFL 507
                             G VGSSK+ V E+SK SHRNRVLHCV SPV MKRSFSSGR L
Sbjct: 294 LMNEDEDPQMGDCDCQFPGHVGSSKVAVGEISKYSHRNRVLHCVMSPVSMKRSFSSGRLL 353

Query: 508 FPKRGR 525
           F +  R
Sbjct: 354 FTRHAR 359


>emb|CAN78205.1| hypothetical protein VITISV_014334 [Vitis vinifera]
          Length = 1377

 Score =  172 bits (435), Expect = 4e-41
 Identities = 95/186 (51%), Positives = 113/186 (60%), Gaps = 11/186 (5%)
 Frame = +1

Query: 1    LRSHSNCPLCRANIAHVNALPLQLPPPVTESPASNEIFSHGHRESTNI------DTDVGE 162
            L+SHSNCPLCRANI      P QLPPPV E P +NE       E  N+      +    E
Sbjct: 1176 LKSHSNCPLCRANIVPTTVSPTQLPPPVMEXPLNNEPSQQSQLEHENVAVGEDLERVAEE 1235

Query: 163  EEIMQGDSVPKTPTRALSDLGNSEQRDTIIEIREVEYQHIRRSVSMSNLCQNQVSIAXXX 342
            EEIM+ + +PKTP+R  SDLGNSE+RDTIIEIR+   Q IRRS+S+    Q ++S+A   
Sbjct: 1236 EEIMRNEVIPKTPSRVFSDLGNSEERDTIIEIRDEGEQQIRRSISLDYSXQTRLSVADIL 1295

Query: 343  XXXXXXXXXXXXX-----GDVGSSKMRVAEMSKCSHRNRVLHCVASPVGMKRSFSSGRFL 507
                              G VGSSK+ V E+SK SHRNRVLHCV SPV MKRSFSSGR L
Sbjct: 1296 LMNEDEDPQMGDCDCQFPGHVGSSKVAVGEISKYSHRNRVLHCVMSPVSMKRSFSSGRLL 1355

Query: 508  FPKRGR 525
            F +  R
Sbjct: 1356 FTRHAR 1361


>ref|XP_004136192.1| PREDICTED: E3 ubiquitin-protein ligase Os04g0590900-like [Cucumis
           sativus] gi|449532198|ref|XP_004173069.1| PREDICTED: E3
           ubiquitin-protein ligase Os04g0590900-like [Cucumis
           sativus]
          Length = 373

 Score =  139 bits (350), Expect = 3e-31
 Identities = 88/183 (48%), Positives = 102/183 (55%), Gaps = 8/183 (4%)
 Frame = +1

Query: 1   LRSHSNCPLCRANIAHVNA-LPLQLPPPVTESPASNEIFSHGHRESTNIDTDVGEEEIMQ 177
           L+SHSNCPLCRANI  +NA  P+QLP   T  P +NE         T+ D D     +  
Sbjct: 176 LKSHSNCPLCRANIISINAGSPVQLPAS-TAYPITNETVPE-----TSQDNDYEAVSLDS 229

Query: 178 GDSVP----KTPTRALSDLGNSEQRDTIIEIREVEYQHIRRSVSMSNLCQNQVSIAXXXX 345
           G S      K   RA SDLGN E+RDTIIE+R+   Q IRRS+SM +  QN + IA    
Sbjct: 230 GQSFSNEDGKNSVRAFSDLGNLEKRDTIIELRDGRLQQIRRSISMDHCSQNHIIIADVLR 289

Query: 346 XXXXXXXXXXXXG---DVGSSKMRVAEMSKCSHRNRVLHCVASPVGMKRSFSSGRFLFPK 516
                       G   DVGSSK  V E S+ SHR R+LHCV SPV MKRSFSSGR    K
Sbjct: 290 LNEDDFGGIDEAGSSGDVGSSKHSVGEDSRSSHRKRILHCVMSPVSMKRSFSSGRLSLTK 349

Query: 517 RGR 525
            GR
Sbjct: 350 HGR 352


>ref|XP_003517045.1| PREDICTED: E3 ubiquitin-protein ligase Os04g0590900-like [Glycine
           max]
          Length = 364

 Score =  131 bits (329), Expect = 7e-29
 Identities = 79/184 (42%), Positives = 99/184 (53%), Gaps = 9/184 (4%)
 Frame = +1

Query: 1   LRSHSNCPLCRANIAHVNALPLQLPPPVTESPASNEIFSHGHRESTNI---------DTD 153
           L+SHS+CPLCRA+I   NA  L +  PVTE P+ N+  S   R   NI         D  
Sbjct: 174 LKSHSSCPLCRASIFTFNAAALHVASPVTEPPSRNDTSSGNQRADENIVAVARDSELDAV 233

Query: 154 VGEEEIMQGDSVPKTPTRALSDLGNSEQRDTIIEIREVEYQHIRRSVSMSNLCQNQVSIA 333
            GE  +  G +V K+  RALSDLGN   R ++IEIR+  Y  IRR+VSM +  Q    ++
Sbjct: 234 EGEVTLTHGGAVSKSALRALSDLGNLRGRHSVIEIRDEGYDSIRRTVSMDHSFQRGSGLS 293

Query: 334 XXXXXXXXXXXXXXXXGDVGSSKMRVAEMSKCSHRNRVLHCVASPVGMKRSFSSGRFLFP 513
                           G  G SK    E SK S+R +VLHCV SP+ MKRSFSSGRF   
Sbjct: 294 IADVLHVNQEHEGCSNG-AGPSKNSRGESSKSSYRRKVLHCVLSPIAMKRSFSSGRFSLS 352

Query: 514 KRGR 525
           + GR
Sbjct: 353 RNGR 356


>gb|ACU17851.1| unknown [Glycine max]
          Length = 364

 Score =  129 bits (323), Expect = 4e-28
 Identities = 78/184 (42%), Positives = 98/184 (53%), Gaps = 9/184 (4%)
 Frame = +1

Query: 1   LRSHSNCPLCRANIAHVNALPLQLPPPVTESPASNEIFSHGHRESTNI---------DTD 153
           L+SHS+CPLCRA+I   NA  L +  PVTE P+ N+  S   R   NI         D  
Sbjct: 174 LKSHSSCPLCRASIFTFNAAALHVASPVTEPPSRNDTSSGNQRADENIVAVARDSELDAV 233

Query: 154 VGEEEIMQGDSVPKTPTRALSDLGNSEQRDTIIEIREVEYQHIRRSVSMSNLCQNQVSIA 333
            GE  +  G +V K+  RALSDLGN   R ++IEIR+  Y  IRR+VSM +  Q    ++
Sbjct: 234 EGEVTLTHGGAVSKSALRALSDLGNLRGRHSVIEIRDEGYDSIRRTVSMDHSFQRGSGLS 293

Query: 334 XXXXXXXXXXXXXXXXGDVGSSKMRVAEMSKCSHRNRVLHCVASPVGMKRSFSSGRFLFP 513
                           G  G SK    E SK S+R +VLHCV SP+ MKRSF SGRF   
Sbjct: 294 IADVLHVNQEHEGCSNG-AGPSKNSRGESSKSSYRRKVLHCVLSPIAMKRSFFSGRFSLS 352

Query: 514 KRGR 525
           + GR
Sbjct: 353 RNGR 356


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