BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00039214
         (421 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512787.1| pentatricopeptide repeat-containing protein,...   213   2e-53
ref|NP_189297.1| pentatricopeptide repeat-containing protein [Ar...   209   2e-52
ref|XP_002876985.1| pentatricopeptide repeat-containing protein ...   208   4e-52
ref|XP_003553320.1| PREDICTED: pentatricopeptide repeat-containi...   192   2e-47
ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226...   191   5e-47

>ref|XP_002512787.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223547798|gb|EEF49290.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 480

 Score =  213 bits (541), Expect = 2e-53
 Identities = 104/140 (74%), Positives = 121/140 (86%)
 Frame = +2

Query: 2   MPIRNVVSWTAMIDGYTRNGRPQEAFELFWRMQLENVMPNEFTLISLLIASAELGSLNLG 181
           MP+RNVVSWTAMI+GY +N RPQEAFELF RMQL NV PN FTL+ LL A  ELGSL LG
Sbjct: 222 MPMRNVVSWTAMINGYVKNQRPQEAFELFQRMQLANVRPNGFTLVGLLRACTELGSLELG 281

Query: 182 VWIHDFALKNGFGLGIYLGTALIDMYSKCGSLEDAKRVFDEMEIKSLATWNSMITSLGVH 361
             IH++AL+NGF +G++LGTALIDMYSKCGS+EDAK+VF+EM+ KSLATWNSMITSLGVH
Sbjct: 282 RRIHEYALENGFKVGVFLGTALIDMYSKCGSIEDAKKVFEEMQKKSLATWNSMITSLGVH 341

Query: 362 GCGEEALSLFENMEMANVQP 421
           G G+EAL+LF  ME ANV+P
Sbjct: 342 GFGKEALALFAQMEEANVRP 361



 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 45/131 (34%), Positives = 74/131 (56%)
 Frame = +2

Query: 23  SWTAMIDGYTRNGRPQEAFELFWRMQLENVMPNEFTLISLLIASAELGSLNLGVWIHDFA 202
           +W  MI  Y  NG  Q+A  L+  M  E   P++FT   ++ A  +  +L+ G  +H FA
Sbjct: 97  TWNFMIRAYNYNGNSQQALLLYNLMICEGFSPDKFTFPFVIKACLDHSALDKGKEVHGFA 156

Query: 203 LKNGFGLGIYLGTALIDMYSKCGSLEDAKRVFDEMEIKSLATWNSMITSLGVHGCGEEAL 382
           +K GF    +L   L+D+Y KCG L+ A+++FD+M ++S+ +W + +  L   G  + A 
Sbjct: 157 IKTGFWKDTFLSNTLMDLYFKCGDLDYARKLFDKMAVRSVVSWTTFVAGLVACGELDTAR 216

Query: 383 SLFENMEMANV 415
           + F+ M M NV
Sbjct: 217 AAFDEMPMRNV 227


>ref|NP_189297.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75275188|sp|Q38959.1|PP257_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g26630, chloroplastic; Flags: Precursor
           gi|1402883|emb|CAA66814.1| hypothetical protein
           [Arabidopsis thaliana] gi|1495263|emb|CAA66119.1| orf09
           [Arabidopsis thaliana] gi|11994298|dbj|BAB01728.1|
           unnamed protein product [Arabidopsis thaliana]
           gi|20466384|gb|AAM20509.1| unknown protein [Arabidopsis
           thaliana] gi|23198064|gb|AAN15559.1| unknown protein
           [Arabidopsis thaliana] gi|332643668|gb|AEE77189.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 455

 Score =  209 bits (531), Expect = 2e-52
 Identities = 101/141 (71%), Positives = 122/141 (86%), Gaps = 1/141 (0%)
 Frame = +2

Query: 2   MPIRNVVSWTAMIDGYTRNGRPQEAFELFWRMQLENVMPNEFTLISLLIASAELGSLNLG 181
           MP+RNVVSWTAMI  Y +N RP EAF+LF RMQ+++V PNEFT+++LL AS +LGSL++G
Sbjct: 211 MPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMG 270

Query: 182 VWIHDFALKNGFGLGIYLGTALIDMYSKCGSLEDAKRVFDEMEIKSLATWNSMITSLGVH 361
            W+HD+A KNGF L  +LGTALIDMYSKCGSL+DA++VFD M+ KSLATWNSMITSLGVH
Sbjct: 271 RWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVH 330

Query: 362 GCGEEALSLFENM-EMANVQP 421
           GCGEEALSLFE M E A+V+P
Sbjct: 331 GCGEEALSLFEEMEEEASVEP 351



 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 41/132 (31%), Positives = 70/132 (53%), Gaps = 1/132 (0%)
 Frame = +2

Query: 23  SWTAMIDGYTRNGRPQEAFELFWRMQLENVMP-NEFTLISLLIASAELGSLNLGVWIHDF 199
           +W  MI   + N +P+EA  LF  M + +    ++FT   ++ A     S+ LG  +H  
Sbjct: 85  TWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHGL 144

Query: 200 ALKNGFGLGIYLGTALIDMYSKCGSLEDAKRVFDEMEIKSLATWNSMITSLGVHGCGEEA 379
           A+K GF   ++    L+D+Y KCG  +  ++VFD+M  +S+ +W +M+  L  +   + A
Sbjct: 145 AIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSA 204

Query: 380 LSLFENMEMANV 415
             +F  M M NV
Sbjct: 205 EIVFNQMPMRNV 216


>ref|XP_002876985.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297322823|gb|EFH53244.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 451

 Score =  208 bits (529), Expect = 4e-52
 Identities = 101/141 (71%), Positives = 120/141 (85%), Gaps = 1/141 (0%)
 Frame = +2

Query: 2   MPIRNVVSWTAMIDGYTRNGRPQEAFELFWRMQLENVMPNEFTLISLLIASAELGSLNLG 181
           MP RNVVSWTAMI  Y +N RP EAF+LF RMQ+++V PNEFT+++LL AS +LGSL++G
Sbjct: 210 MPTRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMG 269

Query: 182 VWIHDFALKNGFGLGIYLGTALIDMYSKCGSLEDAKRVFDEMEIKSLATWNSMITSLGVH 361
            W+HD+A KNGF L  YLGTALIDMYSKCGSL+DA++VFD M+ KSLATWNSMITSLGVH
Sbjct: 270 RWVHDYAHKNGFVLDCYLGTALIDMYSKCGSLQDARKVFDVMQSKSLATWNSMITSLGVH 329

Query: 362 GCGEEALSLFENM-EMANVQP 421
           GCGEEAL LFE M E A+V+P
Sbjct: 330 GCGEEALYLFEEMEEEASVEP 350



 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 41/131 (31%), Positives = 67/131 (51%)
 Frame = +2

Query: 23  SWTAMIDGYTRNGRPQEAFELFWRMQLENVMPNEFTLISLLIASAELGSLNLGVWIHDFA 202
           +W  MI   + N +P+EA  LF  M       ++FT   ++ A     SL LG  +H  A
Sbjct: 85  TWNLMIRSLSLNHKPREALLLFILMLSHQPQFDKFTFPFVIKACLASSSLRLGTQVHGLA 144

Query: 203 LKNGFGLGIYLGTALIDMYSKCGSLEDAKRVFDEMEIKSLATWNSMITSLGVHGCGEEAL 382
           +K GF   ++    L+D+Y KCG  +  ++VFD+M  +S+ +W +M+  L  +   + A 
Sbjct: 145 IKAGFFNDVFFQNTLMDLYFKCGKPDCGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAE 204

Query: 383 SLFENMEMANV 415
            +F  M   NV
Sbjct: 205 IVFNQMPTRNV 215


>ref|XP_003553320.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26630,
           chloroplastic-like [Glycine max]
          Length = 474

 Score =  192 bits (489), Expect = 2e-47
 Identities = 93/140 (66%), Positives = 116/140 (82%)
 Frame = +2

Query: 2   MPIRNVVSWTAMIDGYTRNGRPQEAFELFWRMQLENVMPNEFTLISLLIASAELGSLNLG 181
           MP +NVVSWTA+IDGY ++ +P EAF+LF RMQ +NV PNE+TL+SL+ A  E+GSL LG
Sbjct: 214 MPSKNVVSWTAIIDGYVKHKQPIEAFDLFERMQADNVRPNEYTLVSLVRACTEMGSLKLG 273

Query: 182 VWIHDFALKNGFGLGIYLGTALIDMYSKCGSLEDAKRVFDEMEIKSLATWNSMITSLGVH 361
             +HDFALKNGF L  +LGTALIDMYSKCG+L+DA+ VFD M++++LATWN+MITSLGVH
Sbjct: 274 RRVHDFALKNGFELEPFLGTALIDMYSKCGNLDDARTVFDMMQMRTLATWNTMITSLGVH 333

Query: 362 GCGEEALSLFENMEMANVQP 421
           G  +EALS+FE ME AN  P
Sbjct: 334 GYRDEALSIFEEMEKANEVP 353



 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 43/134 (32%), Positives = 72/134 (53%)
 Frame = +2

Query: 14  NVVSWTAMIDGYTRNGRPQEAFELFWRMQLENVMPNEFTLISLLIASAELGSLNLGVWIH 193
           +V +W  MI  YT  G P+ AF LF  M  +   P++FT   ++ A     +L++G   H
Sbjct: 86  DVFTWNVMIRAYTIGGSPKMAFLLFKAMLYQGFAPDKFTYPCVINACMAYNALDVGRVAH 145

Query: 194 DFALKNGFGLGIYLGTALIDMYSKCGSLEDAKRVFDEMEIKSLATWNSMITSLGVHGCGE 373
             A+K GF   +Y+   ++++Y KC +++D   VFD+M ++++  W ++I      G  +
Sbjct: 146 ALAIKMGFWGDLYVQNTMMNLYFKCENVDDGWNVFDKMCVRNVFAWTTVIAGFVACGKLD 205

Query: 374 EALSLFENMEMANV 415
            A  LFE M   NV
Sbjct: 206 TARELFEQMPSKNV 219


>ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226880 [Cucumis sativus]
          Length = 1725

 Score =  191 bits (485), Expect = 5e-47
 Identities = 91/140 (65%), Positives = 112/140 (80%)
 Frame = +2

Query: 2   MPIRNVVSWTAMIDGYTRNGRPQEAFELFWRMQLENVMPNEFTLISLLIASAELGSLNLG 181
           +P +NVVSWTAMI+GY RN +P+EA ELF RMQ EN+ PNE+T++SL+ A  E+G L LG
Sbjct: 217 IPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLG 276

Query: 182 VWIHDFALKNGFGLGIYLGTALIDMYSKCGSLEDAKRVFDEMEIKSLATWNSMITSLGVH 361
             IHD+A+KN   +G+YLGTALIDMYSKCGS++DA  VF+ M  KSL TWNSMITSLGVH
Sbjct: 277 RGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVH 336

Query: 362 GCGEEALSLFENMEMANVQP 421
           G G+EAL+LF  ME  NV+P
Sbjct: 337 GLGQEALNLFSEMERVNVKP 356



 Score =  104 bits (260), Expect = 7e-21
 Identities = 55/141 (39%), Positives = 83/141 (58%), Gaps = 1/141 (0%)
 Frame = +2

Query: 2    MPIRNVVSWTAMIDGYTRNGRPQEAFELFWRMQLE-NVMPNEFTLISLLIASAELGSLNL 178
            M  ++ +SW +MI  Y ++G   EA E+F  M     V  N  TL ++L+A A  G+L  
Sbjct: 1312 MEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRA 1371

Query: 179  GVWIHDFALKNGFGLGIYLGTALIDMYSKCGSLEDAKRVFDEMEIKSLATWNSMITSLGV 358
            G  IHD  +K      + +GT++IDMY KCG +E AK+ FD M+ K++ +W +M+   G+
Sbjct: 1372 GKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGM 1431

Query: 359  HGCGEEALSLFENMEMANVQP 421
            HG  +EAL +F  M  A V+P
Sbjct: 1432 HGRAKEALDIFYKMVRAGVKP 1452



 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 53/141 (37%), Positives = 74/141 (52%), Gaps = 8/141 (5%)
 Frame = +2

Query: 2    MPIRNVVSWTAMIDGYTRNGRPQEAFELFWRMQLE--------NVMPNEFTLISLLIASA 157
            +P+RNVVSWT+MI GY +N +   A  LF     E        NV  +   ++S+L A +
Sbjct: 1203 IPLRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACS 1262

Query: 158  ELGSLNLGVWIHDFALKNGFGLGIYLGTALIDMYSKCGSLEDAKRVFDEMEIKSLATWNS 337
             +    +   +H F +K GF   I +G  L+D Y+KCG    +K+VFD ME K   +WNS
Sbjct: 1263 RVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNS 1322

Query: 338  MITSLGVHGCGEEALSLFENM 400
            MI      G   EAL +F  M
Sbjct: 1323 MIAVYAQSGLSGEALEVFHGM 1343



 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 43/128 (33%), Positives = 70/128 (54%)
 Frame = +2

Query: 14   NVVSWTAMIDGYTRNGRPQEAFELFWRMQLENVMPNEFTLISLLIASAELGSLNLGVWIH 193
            NV SW ++I    R G   EA   F  ++   ++P   +    + + + L  L  G   H
Sbjct: 1106 NVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSH 1165

Query: 194  DFALKNGFGLGIYLGTALIDMYSKCGSLEDAKRVFDEMEIKSLATWNSMITSLGVHGCGE 373
              A   GF   +++ +ALIDMYSKCG L+DA+ +FDE+ ++++ +W SMIT    +   +
Sbjct: 1166 QQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQAD 1225

Query: 374  EALSLFEN 397
             AL LF++
Sbjct: 1226 NALLLFKD 1233



 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 38/131 (29%), Positives = 71/131 (54%)
 Frame = +2

Query: 23  SWTAMIDGYTRNGRPQEAFELFWRMQLENVMPNEFTLISLLIASAELGSLNLGVWIHDFA 202
           +W  +I   T NG  ++A  L+  M  + +  ++FT   ++ A     S++LG  +H   
Sbjct: 92  TWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSL 151

Query: 203 LKNGFGLGIYLGTALIDMYSKCGSLEDAKRVFDEMEIKSLATWNSMITSLGVHGCGEEAL 382
           +K GF   +++   LID Y KCG    A +VF++M ++++ +W ++I+ L   G  +EA 
Sbjct: 152 IKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEAR 211

Query: 383 SLFENMEMANV 415
            +F+ +   NV
Sbjct: 212 RIFDEIPSKNV 222



 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 39/123 (31%), Positives = 68/123 (55%), Gaps = 3/123 (2%)
 Frame = +2

Query: 2    MPIRNVVSWTAMIDGYTRNGRPQEAFELFWRMQLENVMPNEFTLISLLIASAELGSLNLG 181
            M  +NV SWTAM+ GY  +GR +EA ++F++M    V PN  T +S+L A +  G +  G
Sbjct: 1414 MKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEG 1473

Query: 182  VWIHDFALKNGFGL--GIYLGTALIDMYSKCGSLEDAKRVFDEMEIK-SLATWNSMITSL 352
             W    A+K+ + +  GI     ++D++ + G L +A  +   M++K     W S++ + 
Sbjct: 1474 -WHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSLLGAC 1532

Query: 353  GVH 361
             +H
Sbjct: 1533 RIH 1535