BLASTX nr result

ID: Panax21_contig00039211 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00039211
         (938 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304554.1| AP2/ERF domain-containing transcription fact...   265   9e-69
ref|XP_002509951.1| DNA binding protein, putative [Ricinus commu...   261   2e-67
gb|AFK37793.1| unknown [Medicago truncatula]                          259   6e-67
ref|XP_003611004.1| Ethylene-responsive transcription factor ERF...   259   8e-67
ref|XP_002270561.2| PREDICTED: ethylene-responsive transcription...   258   1e-66

>ref|XP_002304554.1| AP2/ERF domain-containing transcription factor [Populus
           trichocarpa] gi|222841986|gb|EEE79533.1| AP2/ERF
           domain-containing transcription factor [Populus
           trichocarpa]
          Length = 311

 Score =  265 bits (678), Expect = 9e-69
 Identities = 149/263 (56%), Positives = 186/263 (70%), Gaps = 16/263 (6%)
 Frame = -3

Query: 936 GSSVYLQQRDLLQKFSEENPSRNSISPH-SNHPLQNYIYKNSYTVPSKKKLYRGVRQRHW 760
           GSSVYL+QRDLLQKFSEEN    S+S +   +PLQN ++ ++Y  P+KKKLYRGVRQRHW
Sbjct: 56  GSSVYLRQRDLLQKFSEENRINTSLSHNLQTNPLQNPVHSSNYLAPTKKKLYRGVRQRHW 115

Query: 759 GKWAAEIRVPQNRMRVWLGXXXXXXXXXXXXXXXXYKLRGEYARLNFPNLRDPSKLGFGD 580
           GKW AEIR+PQNRMRVWLG                YKLR +YARLNFPNL+DP+KLGF D
Sbjct: 116 GKWVAEIRLPQNRMRVWLGTYDTAEAAAYAYDRAAYKLRSQYARLNFPNLKDPAKLGFTD 175

Query: 579 GSRLNALKNAVDAKIQAICQKVKREKSNKNCRKNGGSSDGDSNIN-ENTESEKVLKIDSI 403
            S+LNALKN VDAKIQAI QKVK+E++ KN  K        SN++ ++T S+K +K+DS 
Sbjct: 176 CSKLNALKNTVDAKIQAIFQKVKKERAKKNAAKK-------SNVDGKSTGSKKPVKVDSN 228

Query: 402 SS----------SSLVGNDSCLSNEMVSPSVSEDGLWK-DDNSAYSVSVTC-AAVPEELE 259
           +S          S+L   D+   +E+VSP+VSEDG WK + +S+ SVS  C   VP+ +E
Sbjct: 229 ASTPSPASSSSFSTLFSGDNWGGSELVSPAVSEDGFWKCESSSSPSVSTDCPVMVPQAME 288

Query: 258 FD--SLARMPSFDPELIWEVLAN 196
           F+  SLARMPS+DPELIWEVLAN
Sbjct: 289 FEDCSLARMPSYDPELIWEVLAN 311


>ref|XP_002509951.1| DNA binding protein, putative [Ricinus communis]
           gi|223549850|gb|EEF51338.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 315

 Score =  261 bits (666), Expect = 2e-67
 Identities = 150/267 (56%), Positives = 183/267 (68%), Gaps = 21/267 (7%)
 Frame = -3

Query: 936 GSSVYLQQRDLLQKFSEENPSRNSISPHSNH--------PLQNYIYKNSYTVPSKKKLYR 781
           GSSVYL+QRDLLQKFSEEN + ++I+  +++        PL+N I  ++Y  PSKKKLYR
Sbjct: 55  GSSVYLRQRDLLQKFSEENRATSTITSSNSYFSSNLPTTPLENSIRTSNYLAPSKKKLYR 114

Query: 780 GVRQRHWGKWAAEIRVPQNRMRVWLGXXXXXXXXXXXXXXXXYKLRGEYARLNFPNLRDP 601
           GVRQRHWGKW AEIR+PQNRMRVWLG                YKLRGEYARLNFPNL+DP
Sbjct: 115 GVRQRHWGKWVAEIRLPQNRMRVWLGTYDTAEAAAYAYDRAAYKLRGEYARLNFPNLKDP 174

Query: 600 SKLGFGDGSRLNALKNAVDAKIQAICQKVKREKSNKNCRKNGGSSDGDSNINEN--TESE 427
           SKLG  D +RLNALK +VDAKIQAICQKV+RE++ +   K        SN+N N      
Sbjct: 175 SKLGLIDCNRLNALKTSVDAKIQAICQKVRRERAKRTAAKK-------SNLNGNGCASEN 227

Query: 426 KVLKIDSIS-----SSSLVGNDSCLS---NEMVSPSVSEDGLWKDDNSAYSVSVTCA-AV 274
           K +K+DS S     S+S   + S LS   +E+VSP++SEDG WK +NS  SVS  C+  V
Sbjct: 228 KGVKVDSSSPSLFPSASASQSSSSLSPTVSELVSPTISEDGFWKCENSPPSVSTDCSILV 287

Query: 273 PEELEFD--SLARMPSFDPELIWEVLA 199
           P+ +EF+  SLARMPSFDPELIW VLA
Sbjct: 288 PQVMEFEDCSLARMPSFDPELIWAVLA 314


>gb|AFK37793.1| unknown [Medicago truncatula]
          Length = 320

 Score =  259 bits (662), Expect = 6e-67
 Identities = 154/273 (56%), Positives = 182/273 (66%), Gaps = 27/273 (9%)
 Frame = -3

Query: 936 GSSVYLQQRDLLQKFSEENPSRNSISPHSNHPLQNYIYKNSYTV--------------PS 799
           GSSVYL+QRD+LQKF EE+    S +P S+   Q+ +  + YT               P 
Sbjct: 54  GSSVYLRQRDILQKFYEESRLNGSFAP-SSFSNQSLLTPSLYTTNSTSISSSFTSLVNPC 112

Query: 798 KKKLYRGVRQRHWGKWAAEIRVPQNRMRVWLGXXXXXXXXXXXXXXXXYKLRGEYARLNF 619
           KKKLYRGVRQRHWGKW AEIR+PQNRMRVWLG                YKLRGEYARLNF
Sbjct: 113 KKKLYRGVRQRHWGKWVAEIRLPQNRMRVWLGTYETAEAAAYAYDRAAYKLRGEYARLNF 172

Query: 618 PNLRDPSKLGFGDGSRLNALKNAVDAKIQAICQKVKREKSN----KNCRKNGGSSDGDSN 451
           PNL+DP+KLGFGD +RLNALKN VDAKIQAICQKVKREK+     K  +KN GS++ D+ 
Sbjct: 173 PNLKDPTKLGFGDSTRLNALKNPVDAKIQAICQKVKREKAKKIAAKEMKKNSGSNNHDTK 232

Query: 450 INENTESEKVLKIDSISSSS-------LVGNDSCLSNEMVSPSVSEDGLWKDDNSAYSVS 292
            ++N  S+K++   S SSSS       LV  D  + NE+ SP+VSEDG+WK +NS  SVS
Sbjct: 233 SDKN--SDKIINSSSCSSSSSSLPLSPLVFCDDWV-NELFSPTVSEDGIWKGENSPNSVS 289

Query: 291 VTCAAVPEELEFD--SLARMPSFDPELIWEVLA 199
                V EE EF+  SLARMPSFDPELIWEVLA
Sbjct: 290 ---TMVTEETEFEDCSLARMPSFDPELIWEVLA 319


>ref|XP_003611004.1| Ethylene-responsive transcription factor ERF061 [Medicago
           truncatula] gi|355512339|gb|AES93962.1|
           Ethylene-responsive transcription factor ERF061
           [Medicago truncatula]
          Length = 320

 Score =  259 bits (661), Expect = 8e-67
 Identities = 154/273 (56%), Positives = 182/273 (66%), Gaps = 27/273 (9%)
 Frame = -3

Query: 936 GSSVYLQQRDLLQKFSEENPSRNSISPHSNHPLQNYIYKNSYTV--------------PS 799
           GSSVYL+QRD+LQKF EE+    S  P S+   Q+ +  + YT               P 
Sbjct: 54  GSSVYLRQRDILQKFYEESRLNGSFVP-SSFSNQSLLTPSLYTTNSTSISSSFTSLVNPC 112

Query: 798 KKKLYRGVRQRHWGKWAAEIRVPQNRMRVWLGXXXXXXXXXXXXXXXXYKLRGEYARLNF 619
           KKKLYRGVRQRHWGKW AEIR+PQNRMRVWLG                YKLRGEYARLNF
Sbjct: 113 KKKLYRGVRQRHWGKWVAEIRLPQNRMRVWLGTYETAEAAAYAYDRAAYKLRGEYARLNF 172

Query: 618 PNLRDPSKLGFGDGSRLNALKNAVDAKIQAICQKVKREKSN----KNCRKNGGSSDGDSN 451
           PNL+DP+KLGFGD +RLNALKN+VDAKIQAICQKVKREK+     K  +KN GS++ D+ 
Sbjct: 173 PNLKDPTKLGFGDSTRLNALKNSVDAKIQAICQKVKREKAKKIAAKKMKKNSGSNNHDTK 232

Query: 450 INENTESEKVLKIDSISSSS-------LVGNDSCLSNEMVSPSVSEDGLWKDDNSAYSVS 292
            ++N  S+K++   S SSSS       LV  D  + NE+ SP+VSEDG+WK +NS  SVS
Sbjct: 233 SDKN--SDKIINSSSCSSSSSSLPLSPLVFCDDWV-NELFSPTVSEDGIWKGENSPNSVS 289

Query: 291 VTCAAVPEELEFD--SLARMPSFDPELIWEVLA 199
                V EE EF+  SLARMPSFDPELIWEVLA
Sbjct: 290 ---TMVTEETEFEDCSLARMPSFDPELIWEVLA 319


>ref|XP_002270561.2| PREDICTED: ethylene-responsive transcription factor ERF061-like
           [Vitis vinifera]
          Length = 318

 Score =  258 bits (660), Expect = 1e-66
 Identities = 147/265 (55%), Positives = 180/265 (67%), Gaps = 18/265 (6%)
 Frame = -3

Query: 936 GSSVYLQQRDLLQKFSEENPSRNSISPHSNHPLQNYIYKNSYTVPSKKKLYRGVRQRHWG 757
           GSSVYL+QRDLLQKFSEE+ +   I+ +S   L + ++ + +  P KKKLYRGVRQRHWG
Sbjct: 57  GSSVYLRQRDLLQKFSEESRASGRITSNS---LTSSLHHSQFLNPCKKKLYRGVRQRHWG 113

Query: 756 KWAAEIRVPQNRMRVWLGXXXXXXXXXXXXXXXXYKLRGEYARLNFPNLRDPSKLGFGDG 577
           KW AEIR+PQNRMRVWLG                YKLRGEYARLNFPNLRD SKLGFGD 
Sbjct: 114 KWVAEIRLPQNRMRVWLGTFDTAEAAAYAYDRAAYKLRGEYARLNFPNLRDASKLGFGDC 173

Query: 576 SRLNALKNAVDAKIQAICQKVKREKSNKNCRKNGGSSDGDSNINENT----ESEKVLKID 409
           +RLNALK++VDAKIQAICQKVKRE+++K  ++   S+ G+    E+T      EK +K+D
Sbjct: 174 ARLNALKSSVDAKIQAICQKVKRERAHKTTKRKSTSTGGEGGGGESTGGGGGGEKAVKVD 233

Query: 408 ------SISSSSLVGNDS-CLSNEMVSPSVSEDGLWKDDNSAYSVSV-------TCAAVP 271
                 SI++S LVG D+    +EM+SPSVSED  WK DNS  S+S           A  
Sbjct: 234 SSPSSSSITASPLVGGDTHSWGSEMLSPSVSEDEFWKGDNSRASLSADGPMLVGALGAGE 293

Query: 270 EELEFDSLARMPSFDPELIWEVLAN 196
            E E  +LAR+PS+DPELIWEVLAN
Sbjct: 294 TESEGCALARLPSYDPELIWEVLAN 318


Top