BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00039186
         (442 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512787.1| pentatricopeptide repeat-containing protein,...   191   7e-47
ref|XP_003548483.1| PREDICTED: pentatricopeptide repeat-containi...   184   9e-45
ref|XP_003553320.1| PREDICTED: pentatricopeptide repeat-containi...   169   3e-40
ref|XP_003624556.1| Pentatricopeptide repeat-containing protein ...   163   1e-38
ref|XP_002876985.1| pentatricopeptide repeat-containing protein ...   163   2e-38

>ref|XP_002512787.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223547798|gb|EEF49290.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 480

 Score =  191 bits (484), Expect = 7e-47
 Identities = 90/146 (61%), Positives = 114/146 (78%)
 Frame = -2

Query: 438 KMEYATLVFDKMSSPPSTFTWNIMIRAHTINNSFRQAILLYNRMICLGVRPDKFTFPFVI 259
           K++YATL+FD++ +P  TFTWN MIRA+  N + +QA+LLYN MIC G  PDKFTFPFVI
Sbjct: 79  KVDYATLIFDQIQNP-HTFTWNFMIRAYNYNGNSQQALLLYNLMICEGFSPDKFTFPFVI 137

Query: 258 KACLASSLVEKGKEVHMLAIKTGFDKDLYFQNTLLDFYFKCKDLCYGQKMFDRMRVKNVV 79
           KACL  S ++KGKEVH  AIKTGF KD +  NTL+D YFKC DL Y +K+FD+M V++VV
Sbjct: 138 KACLDHSALDKGKEVHGFAIKTGFWKDTFLSNTLMDLYFKCGDLDYARKLFDKMAVRSVV 197

Query: 78  SWTTVIAGLVSSRKLDVARVLFEQMP 1
           SWTT +AGLV+  +LD AR  F++MP
Sbjct: 198 SWTTFVAGLVACGELDTARAAFDEMP 223



 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 43/146 (29%), Positives = 75/146 (51%)
 Frame = -2

Query: 441 GKMEYATLVFDKMSSPPSTFTWNIMIRAHTINNSFRQAILLYNRMICLGVRPDKFTFPFV 262
           G+++ A   FD+M    +  +W  MI  +  N   ++A  L+ RM    VRP+ FT   +
Sbjct: 210 GELDTARAAFDEMPMR-NVVSWTAMINGYVKNQRPQEAFELFQRMQLANVRPNGFTLVGL 268

Query: 261 IKACLASSLVEKGKEVHMLAIKTGFDKDLYFQNTLLDFYFKCKDLCYGQKMFDRMRVKNV 82
           ++AC     +E G+ +H  A++ GF   ++    L+D Y KC  +   +K+F+ M+ K++
Sbjct: 269 LRACTELGSLELGRRIHEYALENGFKVGVFLGTALIDMYSKCGSIEDAKKVFEEMQKKSL 328

Query: 81  VSWTTVIAGLVSSRKLDVARVLFEQM 4
            +W ++I  L        A  LF QM
Sbjct: 329 ATWNSMITSLGVHGFGKEALALFAQM 354


>ref|XP_003548483.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26630,
           chloroplastic-like [Glycine max]
          Length = 483

 Score =  184 bits (466), Expect = 9e-45
 Identities = 88/147 (59%), Positives = 115/147 (78%)
 Frame = -2

Query: 441 GKMEYATLVFDKMSSPPSTFTWNIMIRAHTINNSFRQAILLYNRMICLGVRPDKFTFPFV 262
           GKM+YATLVFD++++P   FTWN+MIRA TI  S + A+LL+  M+C G  PDKFT+PFV
Sbjct: 71  GKMKYATLVFDQLNAP-DVFTWNVMIRAFTIGGSPKMALLLFKAMLCQGFAPDKFTYPFV 129

Query: 261 IKACLASSLVEKGKEVHMLAIKTGFDKDLYFQNTLLDFYFKCKDLCYGQKMFDRMRVKNV 82
           I AC+ASS ++ G   H LAIK GF  DLY QNT+++ YFKC+++  G+K+FD+MRV+NV
Sbjct: 130 INACMASSALDLGIVAHALAIKMGFWGDLYVQNTMMNLYFKCENVDDGRKVFDKMRVRNV 189

Query: 81  VSWTTVIAGLVSSRKLDVARVLFEQMP 1
            +WTTVI+GLV+  KLD AR LFEQMP
Sbjct: 190 FAWTTVISGLVACGKLDTARELFEQMP 216



 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 45/147 (30%), Positives = 80/147 (54%), Gaps = 1/147 (0%)
 Frame = -2

Query: 441 GKMEYATLVFDKMSSPPSTFTWNIMIRAHTINNSFRQAILLYNRMICL-GVRPDKFTFPF 265
           GK++ A  +F++M S  +  +W  MI  +  +    +A  L+ RM  +  VRP+++T   
Sbjct: 203 GKLDTARELFEQMPSK-NVVSWTAMIDGYVKHKQPIEAFNLFERMQQVDNVRPNEYTLVS 261

Query: 264 VIKACLASSLVEKGKEVHMLAIKTGFDKDLYFQNTLLDFYFKCKDLCYGQKMFDRMRVKN 85
           +++AC     ++ G+ VH  A+K GF+ + +    L+D Y KC  L   + +FD M+V+ 
Sbjct: 262 LVRACTEMGSLKLGRRVHDFALKNGFELEPFLGTALIDMYSKCGYLDDARTVFDMMQVRT 321

Query: 84  VVSWTTVIAGLVSSRKLDVARVLFEQM 4
           + +W T+I  L      D A  LF++M
Sbjct: 322 LATWNTMITSLGVHGYRDEALSLFDEM 348


>ref|XP_003553320.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26630,
           chloroplastic-like [Glycine max]
          Length = 474

 Score =  169 bits (427), Expect = 3e-40
 Identities = 82/147 (55%), Positives = 109/147 (74%)
 Frame = -2

Query: 441 GKMEYATLVFDKMSSPPSTFTWNIMIRAHTINNSFRQAILLYNRMICLGVRPDKFTFPFV 262
           GKM+YATLVFD++++P   FTWN+MIRA+TI  S + A LL+  M+  G  PDKFT+P V
Sbjct: 70  GKMKYATLVFDQLNAP-DVFTWNVMIRAYTIGGSPKMAFLLFKAMLYQGFAPDKFTYPCV 128

Query: 261 IKACLASSLVEKGKEVHMLAIKTGFDKDLYFQNTLLDFYFKCKDLCYGQKMFDRMRVKNV 82
           I AC+A + ++ G+  H LAIK GF  DLY QNT+++ YFKC+++  G  +FD+M V+NV
Sbjct: 129 INACMAYNALDVGRVAHALAIKMGFWGDLYVQNTMMNLYFKCENVDDGWNVFDKMCVRNV 188

Query: 81  VSWTTVIAGLVSSRKLDVARVLFEQMP 1
            +WTTVIAG V+  KLD AR LFEQMP
Sbjct: 189 FAWTTVIAGFVACGKLDTARELFEQMP 215



 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 43/146 (29%), Positives = 80/146 (54%)
 Frame = -2

Query: 441 GKMEYATLVFDKMSSPPSTFTWNIMIRAHTINNSFRQAILLYNRMICLGVRPDKFTFPFV 262
           GK++ A  +F++M S  +  +W  +I  +  +    +A  L+ RM    VRP+++T   +
Sbjct: 202 GKLDTARELFEQMPSK-NVVSWTAIIDGYVKHKQPIEAFDLFERMQADNVRPNEYTLVSL 260

Query: 261 IKACLASSLVEKGKEVHMLAIKTGFDKDLYFQNTLLDFYFKCKDLCYGQKMFDRMRVKNV 82
           ++AC     ++ G+ VH  A+K GF+ + +    L+D Y KC +L   + +FD M+++ +
Sbjct: 261 VRACTEMGSLKLGRRVHDFALKNGFELEPFLGTALIDMYSKCGNLDDARTVFDMMQMRTL 320

Query: 81  VSWTTVIAGLVSSRKLDVARVLFEQM 4
            +W T+I  L      D A  +FE+M
Sbjct: 321 ATWNTMITSLGVHGYRDEALSIFEEM 346


>ref|XP_003624556.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355499571|gb|AES80774.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 476

 Score =  163 bits (413), Expect = 1e-38
 Identities = 80/148 (54%), Positives = 111/148 (75%), Gaps = 1/148 (0%)
 Frame = -2

Query: 441 GKMEYATLVFDKMSSPPSTFTWNIMIRAHTINNSFRQAILLYNRMICLGVRPDKFTFPFV 262
           GK++YA+LVFD+++ P   FTWN+MIRA+  +   +++I L+  MIC G  PDKFT+PFV
Sbjct: 66  GKIDYASLVFDQLNDP-DIFTWNVMIRAYNTSGLPQKSIFLFKDMICCGFLPDKFTYPFV 124

Query: 261 IKACLASSLVEKGKEVHMLAIKTGFDKDLYFQNTLLDFYFKC-KDLCYGQKMFDRMRVKN 85
           I AC+AS +++ G+  H LAIK GF  D+Y QN +++ YFK   D+  G K+FD+MRV+N
Sbjct: 125 INACIASGVIDFGRLTHGLAIKMGFWSDVYVQNNMMNLYFKIGGDVDDGWKVFDKMRVRN 184

Query: 84  VVSWTTVIAGLVSSRKLDVARVLFEQMP 1
           VVSWTTVIAGLV+  KLD AR +FE++P
Sbjct: 185 VVSWTTVIAGLVACGKLDTAREVFERIP 212



 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 42/127 (33%), Positives = 72/127 (56%)
 Frame = -2

Query: 441 GKMEYATLVFDKMSSPPSTFTWNIMIRAHTINNSFRQAILLYNRMICLGVRPDKFTFPFV 262
           GK++ A  VF+++ S  +  +W  MI  +  N++  +A  L+ RM+   VRP++FT   +
Sbjct: 199 GKLDTAREVFERIPSK-NVVSWTAMINGYVKNDNPIKAFDLFERMLIDNVRPNEFTLVSL 257

Query: 261 IKACLASSLVEKGKEVHMLAIKTGFDKDLYFQNTLLDFYFKCKDLCYGQKMFDRMRVKNV 82
           IKAC     ++ G+ +H  A+K GF+   +    L+D Y KC  L    K+F  M V+N+
Sbjct: 258 IKACTDLGSLKLGRRMHDFALKNGFELGPFLGTALVDMYSKCGSLDAAVKVFGLMEVRNL 317

Query: 81  VSWTTVI 61
            +W T++
Sbjct: 318 ATWNTML 324


>ref|XP_002876985.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297322823|gb|EFH53244.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 451

 Score =  163 bits (412), Expect = 2e-38
 Identities = 80/147 (54%), Positives = 113/147 (76%)
 Frame = -2

Query: 441 GKMEYATLVFDKMSSPPSTFTWNIMIRAHTINNSFRQAILLYNRMICLGVRPDKFTFPFV 262
           G+ +YA+LVF+++ SP STFTWN+MIR+ ++N+  R+A+LL+  M+    + DKFTFPFV
Sbjct: 66  GETQYASLVFNQLQSP-STFTWNLMIRSLSLNHKPREALLLFILMLSHQPQFDKFTFPFV 124

Query: 261 IKACLASSLVEKGKEVHMLAIKTGFDKDLYFQNTLLDFYFKCKDLCYGQKMFDRMRVKNV 82
           IKACLASS +  G +VH LAIK GF  D++FQNTL+D YFKC     G+K+FD+M  +++
Sbjct: 125 IKACLASSSLRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDCGRKVFDKMPGRSI 184

Query: 81  VSWTTVIAGLVSSRKLDVARVLFEQMP 1
           VSWTT++ GLVS+ +LD A ++F QMP
Sbjct: 185 VSWTTMLYGLVSNSQLDSAEIVFNQMP 211



 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 46/145 (31%), Positives = 77/145 (53%)
 Frame = -2

Query: 438 KMEYATLVFDKMSSPPSTFTWNIMIRAHTINNSFRQAILLYNRMICLGVRPDKFTFPFVI 259
           +++ A +VF++M +  +  +W  MI A+  N    +A  L+ RM    V+P++FT   ++
Sbjct: 199 QLDSAEIVFNQMPTR-NVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLL 257

Query: 258 KACLASSLVEKGKEVHMLAIKTGFDKDLYFQNTLLDFYFKCKDLCYGQKMFDRMRVKNVV 79
           +A      +  G+ VH  A K GF  D Y    L+D Y KC  L   +K+FD M+ K++ 
Sbjct: 258 QASTQLGSLSMGRWVHDYAHKNGFVLDCYLGTALIDMYSKCGSLQDARKVFDVMQSKSLA 317

Query: 78  SWTTVIAGLVSSRKLDVARVLFEQM 4
           +W ++I  L      + A  LFE+M
Sbjct: 318 TWNSMITSLGVHGCGEEALYLFEEM 342