BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00039175
         (500 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304609.1| predicted protein [Populus trichocarpa] gi|2...   231   4e-59
ref|XP_004134881.1| PREDICTED: pentatricopeptide repeat-containi...   193   1e-47
ref|XP_003626108.1| Pentatricopeptide repeat-containing protein ...   189   3e-46
emb|CAN78346.1| hypothetical protein VITISV_033453 [Vitis vinifera]   135   3e-30
ref|XP_003612041.1| Pentatricopeptide repeat-containing protein ...   133   1e-29

>ref|XP_002304609.1| predicted protein [Populus trichocarpa] gi|222842041|gb|EEE79588.1|
           predicted protein [Populus trichocarpa]
          Length = 431

 Score =  231 bits (590), Expect = 4e-59
 Identities = 106/166 (63%), Positives = 133/166 (80%)
 Frame = +3

Query: 3   SPEKALQFYTQMQRQSIPFDSYSILFALKSCAHLQNLALIRHLHTHLLKLGFNSHVYVAT 182
           SP KALQ YT M RQSIPFD++SILF LKSC HL+NL +I HLH+H++KLGFN+HVYV+T
Sbjct: 33  SPHKALQLYTHMHRQSIPFDTFSILFTLKSCTHLKNLTIIHHLHSHIIKLGFNTHVYVST 92

Query: 183 SLLNAYVAASFSDACNLFDEMPVRNTVTWNTMITGFSRFGDVENARALFEKMPLRDLASW 362
            LL+AY   SF  AC+LFDEMP RN VTWNTMITG+SR G +  AR+LFE MP+RD ASW
Sbjct: 93  CLLHAYAVMSFDQACDLFDEMPQRNIVTWNTMITGYSRSGSINKARSLFEAMPVRDAASW 152

Query: 363 SAMITGYVNSGKSDKGLMLFREMLVDEKIMPDQLTLCLILTGCSNM 500
           SAMIT Y+N+G  D+GL  F+EM+ +E   PDQ+T+  +L+GC++M
Sbjct: 153 SAMITCYINNGFRDQGLSFFQEMMANENPKPDQVTVGSVLSGCAHM 198


>ref|XP_004134881.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Cucumis sativus]
          Length = 436

 Score =  193 bits (490), Expect = 1e-47
 Identities = 94/166 (56%), Positives = 125/166 (75%)
 Frame = +3

Query: 3   SPEKALQFYTQMQRQSIPFDSYSILFALKSCAHLQNLALIRHLHTHLLKLGFNSHVYVAT 182
           S  KAL FY+QM RQS+P DS+SILF LK+CA   NL+++ HLH H+ KLGF +HV+VAT
Sbjct: 36  SLHKALAFYSQMHRQSVPHDSFSILFMLKACASSNNLSILHHLHAHITKLGFTTHVFVAT 95

Query: 183 SLLNAYVAASFSDACNLFDEMPVRNTVTWNTMITGFSRFGDVENARALFEKMPLRDLASW 362
           SLL++YV  SF  A  +FDEMP +N+VTWNTMI+G+S+ GDV  AR LF++MP RDLASW
Sbjct: 96  SLLHSYVLHSFQLARLVFDEMPHKNSVTWNTMISGYSKAGDVHTARQLFDRMPSRDLASW 155

Query: 363 SAMITGYVNSGKSDKGLMLFREMLVDEKIMPDQLTLCLILTGCSNM 500
           SAMI  Y+N+      L+LF++M+++  I PDQ+    IL GC++M
Sbjct: 156 SAMIAAYINNRNYRGALLLFQDMIIN-GINPDQMAAGSILNGCAHM 200


>ref|XP_003626108.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|87240992|gb|ABD32850.1| Pentatricopeptide repeat
           [Medicago truncatula] gi|355501123|gb|AES82326.1|
           Pentatricopeptide repeat-containing protein [Medicago
           truncatula]
          Length = 417

 Score =  189 bits (479), Expect = 3e-46
 Identities = 90/166 (54%), Positives = 118/166 (71%)
 Frame = +3

Query: 3   SPEKALQFYTQMQRQSIPFDSYSILFALKSCAHLQNLALIRHLHTHLLKLGFNSHVYVAT 182
           SP KA+Q Y++M R  +P D++ ILF LKS   L    +I HLH H++KLGF SH +++T
Sbjct: 17  SPRKAIQLYSKMHRNGVPIDTFCILFTLKSSTRLP---IIHHLHAHIIKLGFTSHFHIST 73

Query: 183 SLLNAYVAASFSDACNLFDEMPVRNTVTWNTMITGFSRFGDVENARALFEKMPLRDLASW 362
            LLN+YV  SF DAC LFDEMP R+TVTWNTMI G+SR  DV+ AR LF++MP RD+ SW
Sbjct: 74  CLLNSYVFLSFLDACILFDEMPQRDTVTWNTMILGYSRLEDVKKARQLFDEMPHRDIVSW 133

Query: 363 SAMITGYVNSGKSDKGLMLFREMLVDEKIMPDQLTLCLILTGCSNM 500
             MI+ Y+N G   + L LFR ML  E I PDQ+  CL+L+GC+++
Sbjct: 134 CNMISAYLNVGSYMQSLYLFRRMLFVEGIKPDQVIACLVLSGCAHV 179


>emb|CAN78346.1| hypothetical protein VITISV_033453 [Vitis vinifera]
          Length = 538

 Score =  135 bits (341), Expect = 3e-30
 Identities = 69/151 (45%), Positives = 96/151 (63%), Gaps = 1/151 (0%)
 Frame = +3

Query: 51  IPFDSYSILFALKSCAHLQNLALIRHLHTHLLKLGFNSHVYVATSLLNAYVAA-SFSDAC 227
           + FDS+S  F LK+CA+LQ+      LH   LKLGF  HVYV T LLN Y A  +F +A 
Sbjct: 86  LSFDSFSFSFLLKACANLQHREGGLQLHALTLKLGFEFHVYVHTVLLNVYAACGAFLEAK 145

Query: 228 NLFDEMPVRNTVTWNTMITGFSRFGDVENARALFEKMPLRDLASWSAMITGYVNSGKSDK 407
            +FDEMPVRN+VTWN  ITG +++G++  AR+L ++MP+  + SW+ +I GY    +  +
Sbjct: 146 QVFDEMPVRNSVTWNVFITGLAKWGELHLARSLLDEMPMPTVVSWTTIIDGYTRMNQPKQ 205

Query: 408 GLMLFREMLVDEKIMPDQLTLCLILTGCSNM 500
            L LF  M +DE I P ++TL  I    SN+
Sbjct: 206 ALALFLTMFLDEGIKPTEITLLAIFPAISNL 236


>ref|XP_003612041.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355513376|gb|AES94999.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 518

 Score =  133 bits (335), Expect = 1e-29
 Identities = 69/166 (41%), Positives = 103/166 (62%), Gaps = 1/166 (0%)
 Frame = +3

Query: 6   PEKALQFYTQMQRQSIPFDSYSILFALKSCAHLQNLALIRHLHTHLLKLGFNSHVYVATS 185
           PE+AL  Y QM   SIP ++Y+  F LK+C+ L  LA    +H  ++K GF S VY   S
Sbjct: 92  PEEALLLYHQMLHHSIPHNAYTFPFLLKACSALSALAETHQIHVQIIKRGFGSEVYATNS 151

Query: 186 LLNAY-VAASFSDACNLFDEMPVRNTVTWNTMITGFSRFGDVENARALFEKMPLRDLASW 362
           LL  Y ++ S   A  LFD +P R+ V+WNTMI G+ + G+VE A  +F+ MP +++ SW
Sbjct: 152 LLRVYAISGSIKSAHVLFDLLPSRDIVSWNTMIDGYIKCGNVEMAYKIFQAMPEKNVISW 211

Query: 363 SAMITGYVNSGKSDKGLMLFREMLVDEKIMPDQLTLCLILTGCSNM 500
           ++MI G+V +G   + L L ++MLV   I PD++TL   L+ C+ +
Sbjct: 212 TSMIVGFVRTGMHKEALCLLQQMLV-AGIKPDKITLSCSLSACAGL 256