BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00039171
         (484 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280792.1| PREDICTED: pentatricopeptide repeat-containi...   155   2e-36
ref|NP_178260.1| pentatricopeptide repeat-containing protein [Ar...   118   4e-25
ref|XP_002876755.1| pentatricopeptide repeat-containing protein ...   112   3e-23
ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp....    74   2e-11
dbj|BAD94552.1| hypothetical protein [Arabidopsis thaliana]            73   2e-11

>ref|XP_002280792.1| PREDICTED: pentatricopeptide repeat-containing protein At2g01510,
           mitochondrial [Vitis vinifera]
           gi|297737690|emb|CBI26891.3| unnamed protein product
           [Vitis vinifera]
          Length = 610

 Score =  155 bits (393), Expect = 2e-36
 Identities = 80/113 (70%), Positives = 90/113 (79%)
 Frame = -3

Query: 344 FSVATHEEPPSTPTSLTITKQAFTSLLKSHSSHPIQLKQIHSLILTAGLSIKNTLITQLL 165
           FS   H    ST  SL ITKQA T+LL+S SSHP  LKQ+H+L+LT GLSIKN LITQLL
Sbjct: 17  FSSLLHAHGSSTGQSLPITKQALTTLLQSCSSHPSLLKQLHALLLTTGLSIKNALITQLL 76

Query: 164 TSLTVLGDMPYARQLFDEMHKPRPYLWNTIIKGYVKNEIPIQAASVYRQMHML 6
           TSLT+LGDM YARQLFDEMHKPRP+LWNTI+KGYVKN IP +A SVY +M  L
Sbjct: 77  TSLTLLGDMSYARQLFDEMHKPRPFLWNTIMKGYVKNGIPDKAVSVYGKMRHL 129


>ref|NP_178260.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75216969|sp|Q9ZVF4.1|PP140_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g01510, mitochondrial; Flags: Precursor
           gi|3785980|gb|AAC67327.1| hypothetical protein
           [Arabidopsis thaliana] gi|330250369|gb|AEC05463.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 584

 Score =  118 bits (296), Expect = 4e-25
 Identities = 53/96 (55%), Positives = 76/96 (79%)
 Frame = -3

Query: 293 ITKQAFTSLLKSHSSHPIQLKQIHSLILTAGLSIKNTLITQLLTSLTVLGDMPYARQLFD 114
           +TKQ  + LL++ SS P QLK+IH+++L  G S KN+L+TQLL +L V+GDM YARQ+FD
Sbjct: 8   LTKQMLSELLRASSSKPKQLKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFD 67

Query: 113 EMHKPRPYLWNTIIKGYVKNEIPIQAASVYRQMHML 6
           EMHKPR +LWNT+ KGYV+N++P ++  +Y++M  L
Sbjct: 68  EMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDL 103


>ref|XP_002876755.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297322593|gb|EFH53014.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 597

 Score =  112 bits (280), Expect = 3e-23
 Identities = 50/96 (52%), Positives = 75/96 (78%)
 Frame = -3

Query: 293 ITKQAFTSLLKSHSSHPIQLKQIHSLILTAGLSIKNTLITQLLTSLTVLGDMPYARQLFD 114
           +TKQ  + LL++ SS P QLK+IH++++  G S KN+L+TQLL +L ++GDM YARQ+FD
Sbjct: 8   LTKQMLSELLRASSSKPKQLKKIHAVVIRTGFSEKNSLLTQLLENLVLVGDMCYARQVFD 67

Query: 113 EMHKPRPYLWNTIIKGYVKNEIPIQAASVYRQMHML 6
           EM KPR +LWNT+ KGYV+N++P ++  +Y++M  L
Sbjct: 68  EMPKPRIFLWNTLFKGYVRNQLPFESVLLYKKMRDL 103


>ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297330765|gb|EFH61184.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 694

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 37/103 (35%), Positives = 61/103 (59%)
 Frame = -3

Query: 317 PSTPTSLTITKQAFTSLLKSHSSHPIQLKQIHSLILTAGLSIKNTLITQLLTSLTVLGDM 138
           P   T+  I   +F + L   S+H  QL+QIH+ +L  GL     LIT+L+ + +  GD+
Sbjct: 10  PFLYTNSGIHSDSFYASLIDSSTHKAQLRQIHARLLVLGLQFSGFLITKLIHASSSYGDI 69

Query: 137 PYARQLFDEMHKPRPYLWNTIIKGYVKNEIPIQAASVYRQMHM 9
            +ARQ+FD++ +P+ + WN II+GY +N     A  +Y +M +
Sbjct: 70  TFARQVFDDLPRPQVFPWNAIIRGYSRNNHFQDALLMYSKMQL 112


>dbj|BAD94552.1| hypothetical protein [Arabidopsis thaliana]
          Length = 694

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 37/103 (35%), Positives = 60/103 (58%)
 Frame = -3

Query: 317 PSTPTSLTITKQAFTSLLKSHSSHPIQLKQIHSLILTAGLSIKNTLITQLLTSLTVLGDM 138
           P   T+  I   +F + L   ++H  QLKQIH+ +L  GL     LIT+L+ + +  GD+
Sbjct: 10  PLLYTNSGIHSDSFYASLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDI 69

Query: 137 PYARQLFDEMHKPRPYLWNTIIKGYVKNEIPIQAASVYRQMHM 9
            +ARQ+FD++ +P+ + WN II+GY +N     A  +Y  M +
Sbjct: 70  TFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQL 112