BLASTX nr result

ID: Panax21_contig00039156 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00039156
         (539 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283091.1| PREDICTED: uncharacterized protein LOC100253...   267   9e-70
emb|CAN80678.1| hypothetical protein VITISV_022712 [Vitis vinifera]   267   9e-70
ref|XP_002513447.1| conserved hypothetical protein [Ricinus comm...   266   1e-69
ref|XP_002303872.1| predicted protein [Populus trichocarpa] gi|2...   256   1e-66
ref|NP_001173978.1| Os04g0473900 [Oryza sativa Japonica Group] g...   231   4e-59

>ref|XP_002283091.1| PREDICTED: uncharacterized protein LOC100253550 [Vitis vinifera]
          Length = 2289

 Score =  267 bits (682), Expect = 9e-70
 Identities = 133/179 (74%), Positives = 147/179 (82%)
 Frame = -1

Query: 539  NASCIAQKLLTSSKPVIKPGDRVLLVHIPGLDFIDAFLGCLRARXXXXXXXXXXXLQRGG 360
            NASCIA  LL + KP+ KPGDRVLLV+IPGLDFIDAF GCLRA+           LQRGG
Sbjct: 511  NASCIAHNLLLNQKPLFKPGDRVLLVYIPGLDFIDAFFGCLRAKLLPVPVLPPDPLQRGG 570

Query: 359  QALLKIENIAKSCNAVAILSTIGYHVAVRAGSVKNLISLPGKNGKSSARWPNLPWIHTDS 180
            QALLKIENIAKSCNA+AILSTI YH  V AGSVK+LIS  GKNGK+SARWPNLPW+HTDS
Sbjct: 571  QALLKIENIAKSCNALAILSTIRYHAGVCAGSVKSLISFTGKNGKNSARWPNLPWLHTDS 630

Query: 179  LIKNSKILLPDDVNDCSEPKEDDMCFLQFTSGSTGDAKGVMITHAGLIHNVKLMHKRYK 3
             IK S+ LL +D+ D SEP+ DD+CFLQFTSGSTGDAKGVMITH GLIHNVKLM +RYK
Sbjct: 631  WIKYSRNLLQEDIADQSEPQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRRRYK 689


>emb|CAN80678.1| hypothetical protein VITISV_022712 [Vitis vinifera]
          Length = 2246

 Score =  267 bits (682), Expect = 9e-70
 Identities = 133/179 (74%), Positives = 147/179 (82%)
 Frame = -1

Query: 539  NASCIAQKLLTSSKPVIKPGDRVLLVHIPGLDFIDAFLGCLRARXXXXXXXXXXXLQRGG 360
            NASCIA  LL + KP+ KPGDRVLLV+IPGLDFIDAF GCLRA+           LQRGG
Sbjct: 535  NASCIAHNLLLNQKPLFKPGDRVLLVYIPGLDFIDAFFGCLRAKLLPVPVLPPDPLQRGG 594

Query: 359  QALLKIENIAKSCNAVAILSTIGYHVAVRAGSVKNLISLPGKNGKSSARWPNLPWIHTDS 180
            QALLKIENIAKSCNA+AILSTI YH  V AGSVK+LIS  GKNGK+SARWPNLPW+HTDS
Sbjct: 595  QALLKIENIAKSCNALAILSTIRYHAGVCAGSVKSLISFTGKNGKNSARWPNLPWLHTDS 654

Query: 179  LIKNSKILLPDDVNDCSEPKEDDMCFLQFTSGSTGDAKGVMITHAGLIHNVKLMHKRYK 3
             IK S+ LL +D+ D SEP+ DD+CFLQFTSGSTGDAKGVMITH GLIHNVKLM +RYK
Sbjct: 655  WIKYSRNLLQEDIADQSEPQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRRRYK 713


>ref|XP_002513447.1| conserved hypothetical protein [Ricinus communis]
            gi|223547355|gb|EEF48850.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 2278

 Score =  266 bits (680), Expect = 1e-69
 Identities = 132/179 (73%), Positives = 148/179 (82%)
 Frame = -1

Query: 539  NASCIAQKLLTSSKPVIKPGDRVLLVHIPGLDFIDAFLGCLRARXXXXXXXXXXXLQRGG 360
            NASCI+ KLLTS KP +KPGDRVLL+H+PGLDF+DAF GCL A+           LQRGG
Sbjct: 496  NASCISHKLLTSQKPAVKPGDRVLLIHVPGLDFVDAFFGCLIAKVIPVPVLPPDPLQRGG 555

Query: 359  QALLKIENIAKSCNAVAILSTIGYHVAVRAGSVKNLISLPGKNGKSSARWPNLPWIHTDS 180
            QALLKIENIAK CNAVAILST  YH AVRAG VKNLISL GKNGKSSARWP+LPWIHTDS
Sbjct: 556  QALLKIENIAKCCNAVAILSTTRYHSAVRAGFVKNLISLTGKNGKSSARWPDLPWIHTDS 615

Query: 179  LIKNSKILLPDDVNDCSEPKEDDMCFLQFTSGSTGDAKGVMITHAGLIHNVKLMHKRYK 3
             IKNS  +LP  ++  SEP+ DD+CFLQFTSGSTGDAKGV+I+H+GLIHNVKLM +RYK
Sbjct: 616  WIKNSTDVLPRKMDYQSEPQPDDLCFLQFTSGSTGDAKGVIISHSGLIHNVKLMRRRYK 674


>ref|XP_002303872.1| predicted protein [Populus trichocarpa] gi|222841304|gb|EEE78851.1|
            predicted protein [Populus trichocarpa]
          Length = 1078

 Score =  256 bits (655), Expect = 1e-66
 Identities = 132/178 (74%), Positives = 147/178 (82%)
 Frame = -1

Query: 536  ASCIAQKLLTSSKPVIKPGDRVLLVHIPGLDFIDAFLGCLRARXXXXXXXXXXXLQRGGQ 357
            ASCIA+KLLTS KPVIKPGDRVLLV++PGLDFIDAF GCLRA+           LQRGGQ
Sbjct: 534  ASCIARKLLTSRKPVIKPGDRVLLVYVPGLDFIDAFFGCLRAKVLPVPVLPPDPLQRGGQ 593

Query: 356  ALLKIENIAKSCNAVAILSTIGYHVAVRAGSVKNLISLPGKNGKSSARWPNLPWIHTDSL 177
            ALLKIE+IAKSCNAVAILST+ YH AVRAGSVKNLISL GKNGK    WPNLPW+HTDS 
Sbjct: 594  ALLKIESIAKSCNAVAILSTLLYHSAVRAGSVKNLISLAGKNGK----WPNLPWMHTDSW 649

Query: 176  IKNSKILLPDDVNDCSEPKEDDMCFLQFTSGSTGDAKGVMITHAGLIHNVKLMHKRYK 3
            +K+SK+L P ++   SE + DD+CFLQFTSGSTGDAKGVMITH GLIHNVKLM + YK
Sbjct: 650  LKDSKVLAPGNIAYESECQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMKRIYK 707


>ref|NP_001173978.1| Os04g0473900 [Oryza sativa Japonica Group]
            gi|255675547|dbj|BAH92706.1| Os04g0473900 [Oryza sativa
            Japonica Group]
          Length = 2470

 Score =  231 bits (590), Expect = 4e-59
 Identities = 117/182 (64%), Positives = 138/182 (75%), Gaps = 3/182 (1%)
 Frame = -1

Query: 539  NASCIAQKLLTSSKPVIKPGDRVLLVHIPGLDFIDAFLGCLRARXXXXXXXXXXXLQRGG 360
            NAS IAQKLLTS+KPVIKPGDRVLL+H+PGL+FIDAF GC+RA            +Q GG
Sbjct: 589  NASYIAQKLLTSTKPVIKPGDRVLLIHLPGLEFIDAFFGCIRAGVIPVPVLPPDPMQSGG 648

Query: 359  QALLKIENIAKSCNAVAILSTIGYHVAVRAGSVKNLISLPGKNGKSSARWPNLPWIHTDS 180
            QALLK+ENI+K CNAVAILST  YH AVRAG +KN+++L  +  K SA+WP++PWIHTDS
Sbjct: 649  QALLKVENISKMCNAVAILSTSSYHAAVRAGYIKNIVTLAKRVQKCSAQWPDIPWIHTDS 708

Query: 179  LIKN---SKILLPDDVNDCSEPKEDDMCFLQFTSGSTGDAKGVMITHAGLIHNVKLMHKR 9
             IKN   S      D    ++P+  D+CFLQFTSGSTGDAKGVMITH GLIHNVK M KR
Sbjct: 709  WIKNYRRSSDSFNSDTVLFTKPQPSDLCFLQFTSGSTGDAKGVMITHEGLIHNVKTMKKR 768

Query: 8    YK 3
            Y+
Sbjct: 769  YR 770


Top