BLASTX nr result

ID: Panax21_contig00039151 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00039151
         (819 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279648.2| PREDICTED: protein FAF-like, chloroplastic [...    70   7e-10
ref|XP_002513735.1| conserved hypothetical protein [Ricinus comm...    69   1e-09
ref|XP_002299770.1| predicted protein [Populus trichocarpa] gi|2...    67   6e-09
emb|CAN72229.1| hypothetical protein VITISV_024734 [Vitis vinifera]    65   2e-08
emb|CBI24433.3| unnamed protein product [Vitis vinifera]               63   9e-08

>ref|XP_002279648.2| PREDICTED: protein FAF-like, chloroplastic [Vitis vinifera]
          Length = 466

 Score = 69.7 bits (169), Expect = 7e-10
 Identities = 51/126 (40%), Positives = 67/126 (53%), Gaps = 6/126 (4%)
 Frame = -3

Query: 361 SSALKVEEEALAMEKQGIVSILGSDYSQGTKTVVASFRRTLSADMSSKQWLVQNGFKSPT 182
           SS+LK++EEA  +EKQGIVSILGSD     +T  AS RRTLS DMSS++WL Q+GF    
Sbjct: 12  SSSLKMDEEAKLIEKQGIVSILGSDCE---RTKAASLRRTLSWDMSSRKWLAQHGFSH-- 66

Query: 181 MKKXXXXXXXXXXXXXXXXXXXXXXXEFDGKKLGQIRKQDDVWSSIISQ------NKTQE 20
           M+K                         +GK++ +       WSSI++Q       K+  
Sbjct: 67  MRKIASSQQFIVSAADSSSSSEGEDEYEEGKEV-ERPGGFQTWSSILTQKGGEESGKSGT 125

Query: 19  LPPPYV 2
           LP PYV
Sbjct: 126 LPLPYV 131


>ref|XP_002513735.1| conserved hypothetical protein [Ricinus communis]
           gi|223547186|gb|EEF48682.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 542

 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 55/144 (38%), Positives = 72/144 (50%), Gaps = 20/144 (13%)
 Frame = -3

Query: 373 SKGCSSALKVEEEALAMEKQGIVSILGSDYSQGTKTVVASFRRTLSADMSSKQWLVQNGF 194
           SK    +  ++EE L  +KQGIVSILGSDY + TK+   S RRTLSADMSSK+W  Q+GF
Sbjct: 6   SKNFRLSSPLKEEVLVTKKQGIVSILGSDYER-TKSA-PSLRRTLSADMSSKKWQSQHGF 63

Query: 193 KSPTMKKXXXXXXXXXXXXXXXXXXXXXXXEFDGKKLGQI----------RKQD------ 62
            SP  K                        E++ +  G+            K+D      
Sbjct: 64  -SPLKKIASSGEFPISITDSSSSSPSSLEGEYERESRGRFEIWSSIQEEKEKKDQENPGQ 122

Query: 61  -DVWSSII---SQNKTQELPPPYV 2
            D+WSSI+   +Q  T+ LPPPYV
Sbjct: 123 FDIWSSILTQKAQEDTKTLPPPYV 146


>ref|XP_002299770.1| predicted protein [Populus trichocarpa] gi|222847028|gb|EEE84575.1|
           predicted protein [Populus trichocarpa]
          Length = 476

 Score = 66.6 bits (161), Expect = 6e-09
 Identities = 52/114 (45%), Positives = 62/114 (54%), Gaps = 1/114 (0%)
 Frame = -3

Query: 358 SALKVEEEALAMEK-QGIVSILGSDYSQGTKTVVASFRRTLSADMSSKQWLVQNGFKSPT 182
           S+  +EEE L + K QGIVSILGSD  + TK+  AS RRTLSADMSSK+W  Q+GF  P 
Sbjct: 11  SSSSLEEENLMLPKRQGIVSILGSDVER-TKSAAASLRRTLSADMSSKKWQAQHGF-YPL 68

Query: 181 MKKXXXXXXXXXXXXXXXXXXXXXXXEFDGKKLGQIRKQDDVWSSIISQNKTQE 20
            K                        E   KK  +   Q DVWSSI+SQ KT+E
Sbjct: 69  KKIASSDHFPAWTEAQGQFDIWSSIQEDKNKKEVEKPGQFDVWSSILSQ-KTKE 121


>emb|CAN72229.1| hypothetical protein VITISV_024734 [Vitis vinifera]
          Length = 500

 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 50/126 (39%), Positives = 66/126 (52%), Gaps = 6/126 (4%)
 Frame = -3

Query: 361 SSALKVEEEALAMEKQGIVSILGSDYSQGTKTVVASFRRTLSADMSSKQWLVQNGFKSPT 182
           SS+LK++EEA  +EKQGIVSILGSD     +T  AS RRTLS DMSS++ L Q+GF    
Sbjct: 12  SSSLKMDEEAKLIEKQGIVSILGSDCE---RTKAASLRRTLSWDMSSRKXLAQHGFSH-- 66

Query: 181 MKKXXXXXXXXXXXXXXXXXXXXXXXEFDGKKLGQIRKQDDVWSSIISQ------NKTQE 20
           M+K                         +GK++ +       WSSI++Q       K+  
Sbjct: 67  MRKIASSQQFIVSAADSSSSSEGEDEYEEGKEV-ERPGGFQTWSSILTQKGGEESGKSGT 125

Query: 19  LPPPYV 2
           LP PYV
Sbjct: 126 LPLPYV 131


>emb|CBI24433.3| unnamed protein product [Vitis vinifera]
          Length = 488

 Score = 62.8 bits (151), Expect = 9e-08
 Identities = 47/121 (38%), Positives = 62/121 (51%), Gaps = 6/121 (4%)
 Frame = -3

Query: 346 VEEEALAMEKQGIVSILGSDYSQGTKTVVASFRRTLSADMSSKQWLVQNGFKSPTMKKXX 167
           ++EEA  +EKQGIVSILGSD     +T  AS RRTLS DMSS++WL Q+GF    M+K  
Sbjct: 1   MDEEAKLIEKQGIVSILGSDCE---RTKAASLRRTLSWDMSSRKWLAQHGFSH--MRKIA 55

Query: 166 XXXXXXXXXXXXXXXXXXXXXEFDGKKLGQIRKQDDVWSSIISQ------NKTQELPPPY 5
                                  +GK++ +       WSSI++Q       K+  LP PY
Sbjct: 56  SSQQFIVSAADSSSSSEGEDEYEEGKEV-ERPGGFQTWSSILTQKGGEESGKSGTLPLPY 114

Query: 4   V 2
           V
Sbjct: 115 V 115


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