BLASTX nr result

ID: Panax21_contig00039148 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00039148
         (515 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635570.1| PREDICTED: probable F-box protein At4g22030-...   154   5e-36
ref|XP_002266376.2| PREDICTED: probable F-box protein At4g22030 ...   153   1e-35
ref|XP_003632952.1| PREDICTED: probable F-box protein At4g22030-...   153   2e-35
emb|CAN76158.1| hypothetical protein VITISV_022365 [Vitis vinifera]   153   2e-35
ref|XP_003632954.1| PREDICTED: probable F-box protein At4g22030-...   152   2e-35

>ref|XP_003635570.1| PREDICTED: probable F-box protein At4g22030-like [Vitis vinifera]
          Length = 657

 Score =  154 bits (390), Expect = 5e-36
 Identities = 87/145 (60%), Positives = 96/145 (66%)
 Frame = -2

Query: 514 DYLRLGEKALKINKVLAISGPLLTGIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNTM 335
           DYLRLG+ ALK+NK+LAISGPLLTG+                               NTM
Sbjct: 514 DYLRLGKIALKVNKILAISGPLLTGLAACGTAFVGSSHGPWAATLGVVAGAMASVV-NTM 572

Query: 334 EHGGQVGMVVELYRSNAGFFKQMEESIEYNLKERDVERRENGELFEMKVALNLGRSLSEL 155
           EHGGQVGMV E+YRSNAGFF+ MEESIE NL ERDV RRENGELFEMKVAL LGRSLS L
Sbjct: 573 EHGGQVGMVFEMYRSNAGFFRLMEESIESNLNERDVGRRENGELFEMKVALQLGRSLSRL 632

Query: 154 RDLATSSKREGLGGDIQDEFGSKLF 80
           +DLA SS      G+  +EF SKLF
Sbjct: 633 KDLAASSYSSSKKGEAIEEFASKLF 657


>ref|XP_002266376.2| PREDICTED: probable F-box protein At4g22030 [Vitis vinifera]
          Length = 430

 Score =  153 bits (387), Expect = 1e-35
 Identities = 87/145 (60%), Positives = 96/145 (66%)
 Frame = -2

Query: 514 DYLRLGEKALKINKVLAISGPLLTGIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNTM 335
           DYLRLG+ ALK+NK+LAISGPLLTG+                               NTM
Sbjct: 287 DYLRLGKIALKVNKILAISGPLLTGLAACGTAFVGSSHGPWAATLGVVAGAMASVV-NTM 345

Query: 334 EHGGQVGMVVELYRSNAGFFKQMEESIEYNLKERDVERRENGELFEMKVALNLGRSLSEL 155
           EHGGQVGMV E+YRSNAGFF+ MEESIE NL ERDV RRENGELFEMKVAL LGRSLS L
Sbjct: 346 EHGGQVGMVFEMYRSNAGFFRLMEESIESNLNERDVGRRENGELFEMKVALQLGRSLSGL 405

Query: 154 RDLATSSKREGLGGDIQDEFGSKLF 80
           +DLA SS      G+  +EF SKLF
Sbjct: 406 KDLAASSYYSSKKGEAIEEFASKLF 430


>ref|XP_003632952.1| PREDICTED: probable F-box protein At4g22030-like [Vitis vinifera]
          Length = 429

 Score =  153 bits (386), Expect = 2e-35
 Identities = 86/145 (59%), Positives = 95/145 (65%)
 Frame = -2

Query: 514 DYLRLGEKALKINKVLAISGPLLTGIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNTM 335
           DYLRLG+ ALK+NK+LAISGPLLTG+                               NTM
Sbjct: 286 DYLRLGKIALKVNKILAISGPLLTGLAACGTAFVGSSHGPWAATLGVVAGAMASVV-NTM 344

Query: 334 EHGGQVGMVVELYRSNAGFFKQMEESIEYNLKERDVERRENGELFEMKVALNLGRSLSEL 155
           EHGGQVGMV E+YR NAGFF+ MEESIE NL ERDV RRENGELFEMKVAL LGRSLS L
Sbjct: 345 EHGGQVGMVFEMYRGNAGFFRMMEESIESNLNERDVGRRENGELFEMKVALQLGRSLSGL 404

Query: 154 RDLATSSKREGLGGDIQDEFGSKLF 80
           +DLA SS      G+  +EF SKLF
Sbjct: 405 KDLAASSYSSSQKGEAIEEFASKLF 429


>emb|CAN76158.1| hypothetical protein VITISV_022365 [Vitis vinifera]
          Length = 432

 Score =  153 bits (386), Expect = 2e-35
 Identities = 86/145 (59%), Positives = 96/145 (66%)
 Frame = -2

Query: 514 DYLRLGEKALKINKVLAISGPLLTGIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNTM 335
           DYLRLG+ ALK+N++LAISGPLLTG+                              VNTM
Sbjct: 288 DYLRLGKIALKVNRMLAISGPLLTGLAACGTAFVGSSTHGPWAATLGVVAGAMASVVNTM 347

Query: 334 EHGGQVGMVVELYRSNAGFFKQMEESIEYNLKERDVERRENGELFEMKVALNLGRSLSEL 155
           EHGGQVGMV E+YRSNAGFF+ MEESIE NL ERDV RRENGELFEMKVAL LGRSLS L
Sbjct: 348 EHGGQVGMVFEMYRSNAGFFRLMEESIESNLNERDVGRRENGELFEMKVALQLGRSLSGL 407

Query: 154 RDLATSSKREGLGGDIQDEFGSKLF 80
           + LA SS      G+  +EF SKLF
Sbjct: 408 KGLAASSCSSSKKGEAIEEFASKLF 432


>ref|XP_003632954.1| PREDICTED: probable F-box protein At4g22030-like [Vitis vinifera]
          Length = 428

 Score =  152 bits (385), Expect = 2e-35
 Identities = 86/145 (59%), Positives = 95/145 (65%)
 Frame = -2

Query: 514 DYLRLGEKALKINKVLAISGPLLTGIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNTM 335
           DYLRLG+ ALK+NK+LAISGPLLTG+                               NTM
Sbjct: 285 DYLRLGKIALKVNKILAISGPLLTGLAACGTAFVGSSHGPWAATLGVVAGAMASVV-NTM 343

Query: 334 EHGGQVGMVVELYRSNAGFFKQMEESIEYNLKERDVERRENGELFEMKVALNLGRSLSEL 155
           EHGGQVGMV E+YRS AGFF+ MEE+IE NL ERDV RRENGELFEMKVAL LGRSLS L
Sbjct: 344 EHGGQVGMVFEMYRSTAGFFRLMEETIESNLSERDVGRRENGELFEMKVALQLGRSLSGL 403

Query: 154 RDLATSSKREGLGGDIQDEFGSKLF 80
           +DLA SS      GD  +EF SKLF
Sbjct: 404 KDLAASSYSSSKNGDAIEEFASKLF 428


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