BLASTX nr result

ID: Panax21_contig00039102 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00039102
         (916 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN73381.1| hypothetical protein VITISV_003162 [Vitis vinifera]   229   1e-64
ref|XP_004148998.1| PREDICTED: uncharacterized protein LOC101210...   216   3e-62
ref|XP_002509967.1| conserved hypothetical protein [Ricinus comm...   219   5e-61
ref|XP_002867685.1| hypothetical protein ARALYDRAFT_914207 [Arab...   213   3e-59
ref|XP_002297973.1| predicted protein [Populus trichocarpa] gi|2...   215   8e-59

>emb|CAN73381.1| hypothetical protein VITISV_003162 [Vitis vinifera]
          Length = 231

 Score =  229 bits (584), Expect(2) = 1e-64
 Identities = 123/201 (61%), Positives = 146/201 (72%), Gaps = 6/201 (2%)
 Frame = -2

Query: 909 LPSLKVPLLLYKSHFLGP------IQLGHKPFLTTPKPGSAIFAKFNLSEILGGRGLCNG 748
           +PSL+ PL  +KSHFLG       IQ        TP P  A  AKF+L  I+GGRGLCNG
Sbjct: 7   VPSLQRPLP-HKSHFLGQGHFPNNIQKASLSRTRTPLPVKAS-AKFDLFGIMGGRGLCNG 64

Query: 747 EEGLQQELKKPISQESSTFIISSTQEKSAISTLESIPEDGFEKELLGLTGGFPGGEKGLK 568
           EEGLQQELK+ I    S   +   +EK A++ ++ +PEDGF+KELLGLTGGFPGGEKGLK
Sbjct: 65  EEGLQQELKRNIEPAPSPDSVKD-EEKPALAAVDDVPEDGFDKELLGLTGGFPGGEKGLK 123

Query: 567 QFIDKNPPPKKSLAEELVPVGFNQSLTKKPKPPVFPLLMPGMIAIVKNQNSPYYMYCGIV 388
           QF++KNPPP+K+    +       +  +KPKPP  PLLMPGMIAIVKN N+P+YMYCGIV
Sbjct: 124 QFLEKNPPPEKTSGNII-----ENARLRKPKPPELPLLMPGMIAIVKNPNNPFYMYCGIV 178

Query: 387 QRITDGKAGVLFEGGNWDRLI 325
           QRITDGKAGVLFEGGNWDRLI
Sbjct: 179 QRITDGKAGVLFEGGNWDRLI 199



 Score = 44.7 bits (104), Expect(2) = 1e-64
 Identities = 16/31 (51%), Positives = 28/31 (90%)
 Frame = -1

Query: 322 FKLNELERREKGPPMVSPRSVVLESMIQQDS 230
           F+L EL+RR+KGPPM +P+S +LE++++Q++
Sbjct: 201 FRLEELQRRDKGPPMKNPKSAILETLLEQEA 231


>ref|XP_004148998.1| PREDICTED: uncharacterized protein LOC101210548 [Cucumis sativus]
           gi|449506166|ref|XP_004162671.1| PREDICTED:
           uncharacterized LOC101210548 [Cucumis sativus]
          Length = 242

 Score =  216 bits (551), Expect(2) = 3e-62
 Identities = 118/206 (57%), Positives = 146/206 (70%), Gaps = 9/206 (4%)
 Frame = -2

Query: 915 INLPSLKVPLLLYKSHFLGPIQ---LGHKPFLTTPKPGSAI------FAKFNLSEILGGR 763
           I+LPS + PLL  KS FL   +   L H+PF    +  S+        A F+L+++LGGR
Sbjct: 7   ISLPSPQTPLL--KSSFLPQNRRRLLLHRPFPLPGRHASSTQHAFRPSAAFDLAQLLGGR 64

Query: 762 GLCNGEEGLQQELKKPISQESSTFIISSTQEKSAISTLESIPEDGFEKELLGLTGGFPGG 583
           GLCNGE+GL++ELK+ +         S     S    ++S+PEDGFEKEL+GLTGGFPGG
Sbjct: 65  GLCNGEQGLKEELKRNVDDNPVLADGSEIPGTSDKLPVDSVPEDGFEKELMGLTGGFPGG 124

Query: 582 EKGLKQFIDKNPPPKKSLAEELVPVGFNQSLTKKPKPPVFPLLMPGMIAIVKNQNSPYYM 403
           EKGLK+FI +NPPP+K  A +   +G   + T+KPKPP  PLL+PGMIAIVKN N+PYYM
Sbjct: 125 EKGLKKFISENPPPRKPSASKSGEIGSIIN-TQKPKPPDLPLLLPGMIAIVKNPNNPYYM 183

Query: 402 YCGIVQRITDGKAGVLFEGGNWDRLI 325
           YCGIVQRITDGKAGVLFEGGNWDRLI
Sbjct: 184 YCGIVQRITDGKAGVLFEGGNWDRLI 209



 Score = 49.3 bits (116), Expect(2) = 3e-62
 Identities = 21/32 (65%), Positives = 28/32 (87%)
 Frame = -1

Query: 322 FKLNELERREKGPPMVSPRSVVLESMIQQDSK 227
           F+L ELERREKGPPM +P+S VLE ++Q+DS+
Sbjct: 211 FRLEELERREKGPPMKNPKSAVLEPLLQKDSQ 242


>ref|XP_002509967.1| conserved hypothetical protein [Ricinus communis]
           gi|223549866|gb|EEF51354.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 238

 Score =  219 bits (559), Expect(2) = 5e-61
 Identities = 114/196 (58%), Positives = 141/196 (71%), Gaps = 10/196 (5%)
 Frame = -2

Query: 882 LYKSHFLGP----IQLGHKPFLTTPKPGSAIF---AKFNLSEILGGRGLCNGEEGLQQEL 724
           L +SHFLG     +   ++P+ + PK         AKF+L E LGGRGLCNGE+G+QQEL
Sbjct: 11  LLRSHFLGQNNSLLNRPNRPYSSIPKESRFKLKPCAKFDLFEFLGGRGLCNGEQGIQQEL 70

Query: 723 KKPISQESSTFIISSTQEKSAI---STLESIPEDGFEKELLGLTGGFPGGEKGLKQFIDK 553
           K+  ++ SS+ + +  +   A    S  E++PE+ FEKEL+GLTGGFPGGEKGLK+FI++
Sbjct: 71  KRDAAEASSSSVAAQEENSGAAAQASENENVPENAFEKELMGLTGGFPGGEKGLKKFIEE 130

Query: 552 NPPPKKSLAEELVPVGFNQSLTKKPKPPVFPLLMPGMIAIVKNQNSPYYMYCGIVQRITD 373
           NPPPKK  A + V +    + +KKPK P  PLLMPGMIAIV N NSPYYMYCGIVQRITD
Sbjct: 131 NPPPKKQSAIDSVRI-LEIATSKKPKAPELPLLMPGMIAIVSNSNSPYYMYCGIVQRITD 189

Query: 372 GKAGVLFEGGNWDRLI 325
           GKA VLFEGGNWDRLI
Sbjct: 190 GKAAVLFEGGNWDRLI 205



 Score = 42.0 bits (97), Expect(2) = 5e-61
 Identities = 17/32 (53%), Positives = 26/32 (81%)
 Frame = -1

Query: 322 FKLNELERREKGPPMVSPRSVVLESMIQQDSK 227
           F+L EL+RREKGPP  +P+SV++E +  Q+S+
Sbjct: 207 FRLEELQRREKGPPGKNPKSVIIEGLTGQESQ 238


>ref|XP_002867685.1| hypothetical protein ARALYDRAFT_914207 [Arabidopsis lyrata subsp.
           lyrata] gi|297313521|gb|EFH43944.1| hypothetical protein
           ARALYDRAFT_914207 [Arabidopsis lyrata subsp. lyrata]
          Length = 250

 Score =  213 bits (541), Expect(2) = 3e-59
 Identities = 114/209 (54%), Positives = 147/209 (70%), Gaps = 12/209 (5%)
 Frame = -2

Query: 915 INLPSLKVPLLLYKSHFLGP---IQLGHKPFLTTPKPGSAIF-----AKFNLSEILGGRG 760
           I +P+++ P+  ++S FLG        ++     PK  S ++      KFNL E++GGRG
Sbjct: 6   ITIPTMRTPI--HRSKFLGQTHQFSTANQSIFPPPKQQSKVYQVKAMGKFNLWEVMGGRG 63

Query: 759 LCNGEEGLQQELKKPIS--QESSTFIISSTQEKSAISTLE-SIPEDGFEKELLGLTGGFP 589
           LCNGE+G+++ELK+ I   QE+S    + T+++S  S L   +PEDGF+KE++GLTGGFP
Sbjct: 64  LCNGEKGIEKELKRNIEDGQETSKAENNETEKESDDSNLSFKVPEDGFDKEMMGLTGGFP 123

Query: 588 GGEKGLKQFIDKNPPPKKSLAEELVPVGFNQSLT-KKPKPPVFPLLMPGMIAIVKNQNSP 412
           GGEKGL+ FI+KNPPP  +          +  +T KKPK P  PLLMPGMIAIVKNQNSP
Sbjct: 124 GGEKGLQTFIEKNPPPPPTPPPAKRGTDASAVVTDKKPKAPELPLLMPGMIAIVKNQNSP 183

Query: 411 YYMYCGIVQRITDGKAGVLFEGGNWDRLI 325
           Y+MYCGIVQRITDGKAGVLFEGGNWDRLI
Sbjct: 184 YHMYCGIVQRITDGKAGVLFEGGNWDRLI 212



 Score = 43.1 bits (100), Expect(2) = 3e-59
 Identities = 19/32 (59%), Positives = 25/32 (78%)
 Frame = -1

Query: 322 FKLNELERREKGPPMVSPRSVVLESMIQQDSK 227
           F+L ELERREKGPP  +P+S +LE +I+Q  K
Sbjct: 214 FRLEELERREKGPPGKNPKSCILEPLIEQMQK 245


>ref|XP_002297973.1| predicted protein [Populus trichocarpa] gi|222845231|gb|EEE82778.1|
           predicted protein [Populus trichocarpa]
          Length = 225

 Score =  215 bits (547), Expect(2) = 8e-59
 Identities = 113/199 (56%), Positives = 141/199 (70%), Gaps = 6/199 (3%)
 Frame = -2

Query: 903 SLKVPLLLYKSHFLGPIQLG---HKPFLTTPKPGSAIF---AKFNLSEILGGRGLCNGEE 742
           S+ +   L +S FLG        HKP+   PK         AKF+  EILGGRGLCNGE+
Sbjct: 4   SITLQSTLLRSSFLGQNNFPNHPHKPYSLIPKEHRLKIKTCAKFDPFEILGGRGLCNGEK 63

Query: 741 GLQQELKKPISQESSTFIISSTQEKSAISTLESIPEDGFEKELLGLTGGFPGGEKGLKQF 562
           G+QQEL++ I +E+     +  +E S    + S+PEDGFEKEL+GLTGGFPGGEKGL++F
Sbjct: 64  GVQQELQRNIEEEAPP--AAGEEEYSGNLEISSVPEDGFEKELMGLTGGFPGGEKGLEKF 121

Query: 561 IDKNPPPKKSLAEELVPVGFNQSLTKKPKPPVFPLLMPGMIAIVKNQNSPYYMYCGIVQR 382
           I++NPPPKK  A +L       ++T KPKPP  PLL+PGMIAIVKN N+P+YMY GIVQR
Sbjct: 122 IEENPPPKKQPAAKL-------TITNKPKPPELPLLLPGMIAIVKNPNNPFYMYTGIVQR 174

Query: 381 ITDGKAGVLFEGGNWDRLI 325
           ITDGKAGV+FEGGNWDRL+
Sbjct: 175 ITDGKAGVIFEGGNWDRLV 193



 Score = 39.3 bits (90), Expect(2) = 8e-59
 Identities = 17/31 (54%), Positives = 22/31 (70%)
 Frame = -1

Query: 322 FKLNELERREKGPPMVSPRSVVLESMIQQDS 230
           F+L ELERREKGPP  +PRS ++E     +S
Sbjct: 195 FRLEELERREKGPPGKNPRSAIIEEFYGTES 225


Top