BLASTX nr result

ID: Panax21_contig00039082 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00039082
         (401 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22263.3| unnamed protein product [Vitis vinifera]               60   2e-07
ref|XP_002278818.1| PREDICTED: probable serine/threonine-protein...    60   2e-07
ref|XP_003527095.1| PREDICTED: probable serine/threonine-protein...    56   3e-06

>emb|CBI22263.3| unnamed protein product [Vitis vinifera]
          Length = 739

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 33/100 (33%), Positives = 58/100 (58%), Gaps = 4/100 (4%)
 Frame = -2

Query: 289 TRGNGLRKSNSSVHDKNRVEGTLEKTKEDPEKERGQESIVRD--NGELLNSKLLKKGASL 116
           +RG  ++K+     ++   +   E+ ++D +KE  +E    +  + E L  +  KKG+  
Sbjct: 40  SRGASVKKAKKVRKERKEEKEEKEEKEKDKDKESEEEKEEEEPKDNEGLELQRSKKGSVN 99

Query: 115 GIRSSFSLKFGRL--TQAEHVAAGWPAWLTVVASEAVEGW 2
           G +S+FS++FG L   +AE + AGWP+WL+  A EA+ GW
Sbjct: 100 G-KSTFSVRFGNLHKVEAEQIIAGWPSWLSAAAGEAIHGW 138


>ref|XP_002278818.1| PREDICTED: probable serine/threonine-protein kinase At1g54610-like
           [Vitis vinifera]
          Length = 712

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 33/100 (33%), Positives = 58/100 (58%), Gaps = 4/100 (4%)
 Frame = -2

Query: 289 TRGNGLRKSNSSVHDKNRVEGTLEKTKEDPEKERGQESIVRD--NGELLNSKLLKKGASL 116
           +RG  ++K+     ++   +   E+ ++D +KE  +E    +  + E L  +  KKG+  
Sbjct: 40  SRGASVKKAKKVRKERKEEKEEKEEKEKDKDKESEEEKEEEEPKDNEGLELQRSKKGSVN 99

Query: 115 GIRSSFSLKFGRL--TQAEHVAAGWPAWLTVVASEAVEGW 2
           G +S+FS++FG L   +AE + AGWP+WL+  A EA+ GW
Sbjct: 100 G-KSTFSVRFGNLHKVEAEQIIAGWPSWLSAAAGEAIHGW 138


>ref|XP_003527095.1| PREDICTED: probable serine/threonine-protein kinase At1g54610-like
           [Glycine max]
          Length = 677

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 29/71 (40%), Positives = 42/71 (59%), Gaps = 3/71 (4%)
 Frame = -2

Query: 205 DPEKERGQESIVRDNGELLNSKLLKKGASLGIRSSFSLKFGRL---TQAEHVAAGWPAWL 35
           +PEK+R ++    ++G    S++ + G +     S S + G L    Q EHVAAGWPAWL
Sbjct: 31  EPEKKRSKKRT--ESGGASQSEVGESGRTSSNCDSLSFRLGNLHKYVQGEHVAAGWPAWL 88

Query: 34  TVVASEAVEGW 2
           + VA EA+ GW
Sbjct: 89  SAVAGEAIHGW 99


Top