BLASTX nr result

ID: Panax21_contig00039065 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00039065
         (421 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN70386.1| hypothetical protein VITISV_029656 [Vitis vinifera]    82   6e-14
ref|XP_002317485.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09
ref|XP_002329124.1| predicted protein [Populus trichocarpa] gi|2...    62   6e-08

>emb|CAN70386.1| hypothetical protein VITISV_029656 [Vitis vinifera]
          Length = 223

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 50/124 (40%), Positives = 67/124 (54%), Gaps = 2/124 (1%)
 Frame = +3

Query: 3   SISDASERKIVISRAKTGA-SKKPFEREIYQRKKSVLTPQYG-SQRWQFITQTPVLSRKV 176
           S SD SER    +  +    +K    R+ Y   + VL   YG SQRWQFIT  PVLSR+ 
Sbjct: 104 SSSDNSERMRAWTTMQAKVVAKTAITRDGYLANRPVLAQPYGNSQRWQFITPAPVLSREP 163

Query: 177 SHISKAESTSRVLEEEDELKGKKQVKGKRNGSRGFCWSFFSWFVSACNECHAISPSRRDF 356
           S   +A +      ++D+L+ KK    KR    G  W FF  F+SAC ECHA+ PSR++ 
Sbjct: 164 SRRRRAGAAV----QDDQLRQKKVAVEKRRAKPGIGWRFFRLFMSACRECHAMEPSRKEN 219

Query: 357 VFQG 368
           +  G
Sbjct: 220 IKSG 223


>ref|XP_002317485.1| predicted protein [Populus trichocarpa] gi|222860550|gb|EEE98097.1|
           predicted protein [Populus trichocarpa]
          Length = 249

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 40/120 (33%), Positives = 56/120 (46%), Gaps = 9/120 (7%)
 Frame = +3

Query: 36  ISRAKTGASKKPFEREIYQ--------RKKSVLTPQYGS-QRWQFITQTPVLSRKVSHIS 188
           +S A+T +S     R +Y           K+V+   YGS QRWQ I   P  + K     
Sbjct: 128 VSSARTSSSDNSERRRLYNITSSQTPLASKAVIAQLYGSSQRWQHIMPVPAAALK--RAD 185

Query: 189 KAESTSRVLEEEDELKGKKQVKGKRNGSRGFCWSFFSWFVSACNECHAISPSRRDFVFQG 368
               + R+L +E     KKQ+K  +    GF   FF  F+ AC ECHA+ PS +D +  G
Sbjct: 186 SRRKSGRILVKEGLSNNKKQIKKGKRDRSGFWRRFFRSFLLACRECHAMEPSTKDDILDG 245


>ref|XP_002329124.1| predicted protein [Populus trichocarpa] gi|222869793|gb|EEF06924.1|
           predicted protein [Populus trichocarpa]
          Length = 235

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 44/122 (36%), Positives = 57/122 (46%), Gaps = 12/122 (9%)
 Frame = +3

Query: 36  ISRAKTGASKKPFEREIYQRKKSVLTPQ---------YGS-QRWQFITQTP--VLSRKVS 179
           +S A+T +S     R +Y    S  TP          YGS QRWQ I   P  VL R+ S
Sbjct: 113 VSSARTSSSDNSERRRLYNNITSTKTPLASKVVMAQLYGSSQRWQHIMPVPTAVLKREDS 172

Query: 180 HISKAESTSRVLEEEDELKGKKQVKGKRNGSRGFCWSFFSWFVSACNECHAISPSRRDFV 359
                  +  +L +E  +  KKQVK  +    G    FF  F+ AC ECHA+ PS RD +
Sbjct: 173 R----RKSGGILVKEGLISNKKQVKKGKRERSGLWRRFFMSFLVACRECHAMEPSTRDDM 228

Query: 360 FQ 365
            Q
Sbjct: 229 LQ 230


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