BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00039047
         (380 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCH50976.1| T4.15 [Malus x robusta]                                59   1e-09
gb|AEJ72569.1| putative reverse transcriptase family member [Mal...    57   3e-08
gb|ABB00038.1| reverse transcriptase family member [Glycine max]       62   4e-08
gb|AAT40500.1| Putative reverse transcriptase, identical [Solanu...    57   2e-07
dbj|BAJ95890.1| predicted protein [Hordeum vulgare subsp. vulgare]     54   2e-07

>emb|CCH50976.1| T4.15 [Malus x robusta]
          Length = 986

 Score = 59.3 bits (142), Expect(2) = 1e-09
 Identities = 28/67 (41%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
 Frame = +3

Query: 3    KIRVGWMR*HCASGCLCYYKVVVKFREKFYKILIRQTW-YEVECRVAMKQNLNKMRVSDM 179
            +I+ GWM+   ASG LC  ++ +K + KFY+  IR    Y  EC     Q+++KM V++M
Sbjct: 817  RIQAGWMKWKSASGVLCDRRMPLKLKGKFYRTAIRPAMLYGTECWAVKHQHVHKMGVAEM 876

Query: 180  RVLRWKC 200
            R+LRW C
Sbjct: 877  RMLRWMC 883



 Score = 28.1 bits (61), Expect(2) = 1e-09
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = +2

Query: 203 HLRQDRVRFYDIHKKVGVVDEDHKSRPKQ 289
           H R+D++R  DI  KVGV +   K R  Q
Sbjct: 885 HTRKDKIRNEDIRGKVGVAEIQGKMRENQ 913


>gb|AEJ72569.1| putative reverse transcriptase family member [Malus x domestica]
          Length = 212

 Score = 57.0 bits (136), Expect(2) = 3e-08
 Identities = 28/67 (41%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
 Frame = +3

Query: 3   KIRVGWMR*HCASGCLCYYKVVVKFREKFYKILIRQTW-YEVECRVAMKQNLNKMRVSDM 179
           +I+ GWM+   ASG LC   + +K + KFY+  IR    Y  EC     Q+++KM V++M
Sbjct: 43  RIQAGWMKWKSASGVLCDRCMPLKLKGKFYRTTIRPAMLYGTECWAVKYQHVHKMGVAEM 102

Query: 180 RVLRWKC 200
           R+LRW C
Sbjct: 103 RMLRWMC 109



 Score = 25.8 bits (55), Expect(2) = 3e-08
 Identities = 13/42 (30%), Positives = 22/42 (52%)
 Frame = +2

Query: 203 HLRQDRVRFYDIHKKVGVVDEDHKSRPKQRIFIFIIWRKCRY 328
           H R+D++R  DI  KVGV + +   R  +  +   + R+  Y
Sbjct: 111 HTRKDKIRNEDIRGKVGVAEIEGNMRENRLRWFGHVQRRPTY 152


>gb|ABB00038.1| reverse transcriptase family member [Glycine max]
          Length = 377

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 30/67 (44%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
 Frame = +3

Query: 3   KIRVGWMR*HCASGCLCYYKVVVKFREKFYKILIRQT-WYEVECRVAMKQNLNKMRVSDM 179
           +I+ GWM+   ASG LC  KV +K + KFY+  +R T  Y  EC     Q+ NK+ V++M
Sbjct: 209 RIQAGWMKWRKASGVLCDAKVPIKLKGKFYRTAVRPTILYGTECWAVKSQHENKVGVAEM 268

Query: 180 RVLRWKC 200
           R+LRW C
Sbjct: 269 RMLRWMC 275


>gb|AAT40500.1| Putative reverse transcriptase, identical [Solanum demissum]
          Length = 213

 Score = 57.4 bits (137), Expect(2) = 2e-07
 Identities = 25/67 (37%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
 Frame = +3

Query: 3   KIRVGWMR*HCASGCLCYYKVVVKFREKFYKILIRQT-WYEVECRVAMKQNLNKMRVSDM 179
           ++   WM+   ASG LC  K+ +K + KFY++++R    Y  EC      +++KM V++M
Sbjct: 57  RVGAAWMKWRLASGVLCDKKIPLKLKGKFYRVVVRPALLYGAECWPVKNAHVHKMHVAEM 116

Query: 180 RVLRWKC 200
           R+LRW C
Sbjct: 117 RMLRWMC 123



 Score = 22.3 bits (46), Expect(2) = 2e-07
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +2

Query: 203 HLRQDRVRFYDIHKKVGVVDEDHKSR 280
           H R D++R   I +KVGV     K R
Sbjct: 125 HTRSDKIRNEVIREKVGVASVVDKLR 150


>dbj|BAJ95890.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 210

 Score = 54.3 bits (129), Expect(2) = 2e-07
 Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
 Frame = +3

Query: 3   KIRVGWMR*HCASGCLCYYKVVVKFREKFYKILIRQT-WYEVECRVAMKQNLNKMRVSDM 179
           +I+ GWM+   ASG LC  +V+ K + +FY+  IR    Y  EC    ++++ ++ V++M
Sbjct: 69  RIKAGWMKWRQASGVLCDKRVLQKLKGRFYRTAIRPAILYGAECWPTKRRHIQQLGVAEM 128

Query: 180 RVLRWKC 200
           R+LRW C
Sbjct: 129 RMLRWIC 135



 Score = 25.4 bits (54), Expect(2) = 2e-07
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +2

Query: 203 HLRQDRVRFYDIHKKVGVVDEDHK 274
           H R+DRVR  DI +++GV   + K
Sbjct: 137 HTRKDRVRNDDIRERLGVAPIEEK 160