BLASTX nr result

ID: Panax21_contig00039043 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00039043
         (404 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27059.3| unnamed protein product [Vitis vinifera]              226   1e-57
ref|XP_003520043.1| PREDICTED: protein TRANSPARENT TESTA 1-like ...   221   5e-56
ref|XP_002278787.1| PREDICTED: protein TRANSPARENT TESTA 1-like ...   220   8e-56
ref|XP_003518004.1| PREDICTED: protein TRANSPARENT TESTA 1-like ...   219   1e-55
ref|XP_004140390.1| PREDICTED: protein TRANSPARENT TESTA 1-like ...   219   2e-55

>emb|CBI27059.3| unnamed protein product [Vitis vinifera]
          Length = 275

 Score =  226 bits (576), Expect = 1e-57
 Identities = 101/126 (80%), Positives = 106/126 (84%)
 Frame = -2

Query: 403 LPCYCCAEGCKNNIQHPRSKPLKDFRTLQTHYKRKHGTKPFGCRKCGKAFAVRGDWRTHE 224
           LPCYCCA+GCKNNI+HPRSKPLKDFRTLQTHYKRKHG KPF CRKCGKAFAVRGDWRTHE
Sbjct: 154 LPCYCCAQGCKNNIEHPRSKPLKDFRTLQTHYKRKHGAKPFSCRKCGKAFAVRGDWRTHE 213

Query: 223 KNCGKLWFCICGSDFKHKRSLKDHVRAFGDGHAPHTDQYNLFDPLEEDDIDIHQQHKNEG 44
           KNCGKLWFCICGSDFKHKRSLKDHVRAFGDGHAPH+    ++   EEDD D    H N G
Sbjct: 214 KNCGKLWFCICGSDFKHKRSLKDHVRAFGDGHAPHS--VEMYGVEEEDDND--DDHGNGG 269

Query: 43  HHGSTC 26
           H    C
Sbjct: 270 HGSVLC 275


>ref|XP_003520043.1| PREDICTED: protein TRANSPARENT TESTA 1-like [Glycine max]
          Length = 363

 Score =  221 bits (563), Expect = 5e-56
 Identities = 96/133 (72%), Positives = 109/133 (81%), Gaps = 9/133 (6%)
 Frame = -2

Query: 403 LPCYCCAEGCKNNIQHPRSKPLKDFRTLQTHYKRKHGTKPFGCRKCGKAFAVRGDWRTHE 224
           LPCYCCAEGCKNNI+HPRS+PLKDFRTLQTHYKRKHG KPFGCRKCGK FAVRGDWRTHE
Sbjct: 195 LPCYCCAEGCKNNIEHPRSRPLKDFRTLQTHYKRKHGAKPFGCRKCGKPFAVRGDWRTHE 254

Query: 223 KNCGKLWFCICGSDFKHKRSLKDHVRAFGDGHAPHT---------DQYNLFDPLEEDDID 71
           KNCGKLWFCICGSDFKHKRSLKDHVRAFGDGHAPHT         D   L    ++D+++
Sbjct: 255 KNCGKLWFCICGSDFKHKRSLKDHVRAFGDGHAPHTVESCGRVGEDGLLLLGDDDDDELE 314

Query: 70  IHQQHKNEGHHGS 32
           + +  + E ++ +
Sbjct: 315 VEEDDEEEDYNNT 327


>ref|XP_002278787.1| PREDICTED: protein TRANSPARENT TESTA 1-like [Vitis vinifera]
          Length = 273

 Score =  220 bits (561), Expect = 8e-56
 Identities = 96/111 (86%), Positives = 101/111 (90%)
 Frame = -2

Query: 403 LPCYCCAEGCKNNIQHPRSKPLKDFRTLQTHYKRKHGTKPFGCRKCGKAFAVRGDWRTHE 224
           LPCYCCA+GCKNNI+HPRSKPLKDFRTLQTHYKRKHG KPF CRKCGKAFAVRGDWRTHE
Sbjct: 154 LPCYCCAQGCKNNIEHPRSKPLKDFRTLQTHYKRKHGAKPFSCRKCGKAFAVRGDWRTHE 213

Query: 223 KNCGKLWFCICGSDFKHKRSLKDHVRAFGDGHAPHTDQYNLFDPLEEDDID 71
           KNCGKLWFCICGSDFKHKRSLKDHVRAFGDGHAPH+    ++   EEDD D
Sbjct: 214 KNCGKLWFCICGSDFKHKRSLKDHVRAFGDGHAPHS--VEMYGVEEEDDND 262


>ref|XP_003518004.1| PREDICTED: protein TRANSPARENT TESTA 1-like [Glycine max]
          Length = 348

 Score =  219 bits (559), Expect = 1e-55
 Identities = 92/124 (74%), Positives = 109/124 (87%), Gaps = 2/124 (1%)
 Frame = -2

Query: 403 LPCYCCAEGCKNNIQHPRSKPLKDFRTLQTHYKRKHGTKPFGCRKCGKAFAVRGDWRTHE 224
           LPCYCCAEGCKNNI+HPRS+PLKDFRTLQTHYKRKHG KPFGCRKCGK FAVRGDWRTHE
Sbjct: 201 LPCYCCAEGCKNNIEHPRSRPLKDFRTLQTHYKRKHGAKPFGCRKCGKPFAVRGDWRTHE 260

Query: 223 KNCGKLWFCICGSDFKHKRSLKDHVRAFGDGHAPHTDQY--NLFDPLEEDDIDIHQQHKN 50
           KNCG+LWFCICGSDFKHKRSLKDHVRAFGDGHAPHT +    + +  +++++++  + + 
Sbjct: 261 KNCGRLWFCICGSDFKHKRSLKDHVRAFGDGHAPHTVESCDRVGEDEDDEELEVEDEEEE 320

Query: 49  EGHH 38
           + H+
Sbjct: 321 DYHN 324


>ref|XP_004140390.1| PREDICTED: protein TRANSPARENT TESTA 1-like [Cucumis sativus]
          Length = 286

 Score =  219 bits (558), Expect = 2e-55
 Identities = 95/117 (81%), Positives = 103/117 (88%), Gaps = 1/117 (0%)
 Frame = -2

Query: 403 LPCYCCAEGCKNNIQHPRSKPLKDFRTLQTHYKRKHGTKPFGCRKCGKAFAVRGDWRTHE 224
           +PCYCCAEGCKNNI+HPRS+PLKDFRTLQTHYKRKHG KPF CRKCGK+FAVRGDWRTHE
Sbjct: 155 VPCYCCAEGCKNNIEHPRSRPLKDFRTLQTHYKRKHGAKPFSCRKCGKSFAVRGDWRTHE 214

Query: 223 KNCGKLWFCICGSDFKHKRSLKDHVRAFGDGHAPHTDQY-NLFDPLEEDDIDIHQQH 56
           KNCGKLWFCICGSDFKHKRSLKDHVRAFGDGHAPHT Q   + D  ++DD +    H
Sbjct: 215 KNCGKLWFCICGSDFKHKRSLKDHVRAFGDGHAPHTVQLCEVEDDNDDDDWESDHHH 271


Top