BLASTX nr result

ID: Panax21_contig00039035 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00039035
         (563 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN78929.1| hypothetical protein VITISV_026521 [Vitis vinifera]   201   7e-50
emb|CBI22496.3| unnamed protein product [Vitis vinifera]              200   1e-49
ref|XP_002269406.2| PREDICTED: uncharacterized protein LOC100267...   199   2e-49
ref|XP_002300252.1| predicted protein [Populus trichocarpa] gi|2...   188   4e-46
ref|XP_002313890.1| predicted protein [Populus trichocarpa] gi|2...   186   3e-45

>emb|CAN78929.1| hypothetical protein VITISV_026521 [Vitis vinifera]
          Length = 806

 Score =  201 bits (511), Expect = 7e-50
 Identities = 117/197 (59%), Positives = 134/197 (68%), Gaps = 10/197 (5%)
 Frame = +3

Query: 3   LLLLHAVSQKLRVVDLQDMSFGKYLLRDISQSGLSCQVLNLRSSHFRKLNMIGKFMQMQT 182
           L L+ A++QKLR+VDLQD+S GK  LRD+SQ GL+CQ LNLRSSHFRKLN+IGKFMQM T
Sbjct: 92  LSLMRAINQKLRIVDLQDLSLGKDFLRDLSQRGLTCQALNLRSSHFRKLNLIGKFMQMHT 151

Query: 183 LNLDFSASLTSFQESCFTCMPNLKCLSLCETRVSNLWTTSAALAKLTSLIELRFQNSLSW 362
           LNLDFS SLTSF+E CFTCMPNL+CLS+CETRVSNLWTT AAL+KL SL ELRFQN L  
Sbjct: 152 LNLDFSTSLTSFREDCFTCMPNLRCLSMCETRVSNLWTTIAALSKLPSLAELRFQNCLCC 211

Query: 363 DEIVGSCYGSSGGNAED-SNSDHMDNELHLGAPL--GEETMNQYSNAEGELTSLFPF--- 524
            +  G C  SSGG A D + S        + AP   G    NQ S A+      F     
Sbjct: 212 YD-TGPCPVSSGGKANDRTYSVQPQRGPLIEAPSVDGWILGNQNSTAQEAFQEFFLHNNV 270

Query: 525 ----ETPSTLGDSSDDS 563
               E  +T  DSSDDS
Sbjct: 271 IMNPEFQNTTEDSSDDS 287


>emb|CBI22496.3| unnamed protein product [Vitis vinifera]
          Length = 814

 Score =  200 bits (508), Expect = 1e-49
 Identities = 111/187 (59%), Positives = 127/187 (67%)
 Frame = +3

Query: 3   LLLLHAVSQKLRVVDLQDMSFGKYLLRDISQSGLSCQVLNLRSSHFRKLNMIGKFMQMQT 182
           L L+ A++QKLR+VDLQD+S GK  LRD+SQ GL+CQ LNLRSSHFRKLN+IGKFMQM T
Sbjct: 122 LSLMRAINQKLRIVDLQDLSLGKDFLRDLSQRGLTCQALNLRSSHFRKLNLIGKFMQMHT 181

Query: 183 LNLDFSASLTSFQESCFTCMPNLKCLSLCETRVSNLWTTSAALAKLTSLIELRFQNSLSW 362
           LNLDFS SLTSF+E CFTCMPNL+CLS+CETRVSNLWTT AAL+KL SL ELRFQN L  
Sbjct: 182 LNLDFSTSLTSFREDCFTCMPNLRCLSMCETRVSNLWTTIAALSKLPSLAELRFQNCLCC 241

Query: 363 DEIVGSCYGSSGGNAEDSNSDHMDNELHLGAPLGEETMNQYSNAEGELTSLFPFETPSTL 542
            +  G C  SSGG A D    + +  LH    +  E  N                   T 
Sbjct: 242 YD-TGPCPVSSGGKANDRT--YSEFFLHNNVIMNPEFQN-------------------TT 279

Query: 543 GDSSDDS 563
            DSSDDS
Sbjct: 280 EDSSDDS 286


>ref|XP_002269406.2| PREDICTED: uncharacterized protein LOC100267918 [Vitis vinifera]
          Length = 794

 Score =  199 bits (507), Expect = 2e-49
 Identities = 100/137 (72%), Positives = 113/137 (82%)
 Frame = +3

Query: 3   LLLLHAVSQKLRVVDLQDMSFGKYLLRDISQSGLSCQVLNLRSSHFRKLNMIGKFMQMQT 182
           L L+ A++QKLR+VDLQD+S GK  LRD+SQ GL+CQ LNLRSSHFRKLN+IGKFMQM T
Sbjct: 92  LSLMRAINQKLRIVDLQDLSLGKDFLRDLSQRGLTCQALNLRSSHFRKLNLIGKFMQMHT 151

Query: 183 LNLDFSASLTSFQESCFTCMPNLKCLSLCETRVSNLWTTSAALAKLTSLIELRFQNSLSW 362
           LNLDFS SLTSF+E CFTCMPNL+CLS+CETRVSNLWTT AAL+KL SL ELRFQN L  
Sbjct: 152 LNLDFSTSLTSFREDCFTCMPNLRCLSMCETRVSNLWTTIAALSKLPSLAELRFQNCLCC 211

Query: 363 DEIVGSCYGSSGGNAED 413
            +  G C  SSGG A D
Sbjct: 212 YD-TGPCPVSSGGKAND 227


>ref|XP_002300252.1| predicted protein [Populus trichocarpa] gi|222847510|gb|EEE85057.1|
           predicted protein [Populus trichocarpa]
          Length = 817

 Score =  188 bits (478), Expect = 4e-46
 Identities = 109/199 (54%), Positives = 134/199 (67%), Gaps = 12/199 (6%)
 Frame = +3

Query: 3   LLLLHAVSQKLRVVDLQDMSFGK----YLLRDISQSGLSCQVLNLRSSHFRKLNMIGKFM 170
           L L+ A +QKL+VVDLQD+ FGK    ++LR++SQ GL+CQ+LNLRSSHFR LNM GKFM
Sbjct: 97  LSLMRAFNQKLQVVDLQDLPFGKDFLRFILRELSQKGLACQILNLRSSHFRNLNMAGKFM 156

Query: 171 QMQTLNLDFSASLTSFQESCFTCMPNLKCLSLCETRVSNLWTTSAALAKLTSLIELRFQN 350
           Q+ TLNLDFS SLTSFQE CFTCMP L CLS+CETRV+NLWTT AAL+KL+SL+ELRFQ 
Sbjct: 157 QIHTLNLDFSTSLTSFQEDCFTCMPILTCLSMCETRVANLWTTIAALSKLSSLVELRFQK 216

Query: 351 SLSWDEIVGSCYGSSGGNAEDSNS-----DHMDNELHLGAPLGEETMNQYS---NAEGEL 506
            +  ++   S   SSGGN ED          +D E  L     E T N +S    A G+ 
Sbjct: 217 WICCND-SASPSASSGGNLEDQPDVRELLTDIDEESFLNQGTDEGTGNVFSFNDIATGQ- 274

Query: 507 TSLFPFETPSTLGDSSDDS 563
                 +  S + DSSDD+
Sbjct: 275 ------QVQSMMEDSSDDN 287


>ref|XP_002313890.1| predicted protein [Populus trichocarpa] gi|222850298|gb|EEE87845.1|
           predicted protein [Populus trichocarpa]
          Length = 783

 Score =  186 bits (471), Expect = 3e-45
 Identities = 95/137 (69%), Positives = 108/137 (78%)
 Frame = +3

Query: 3   LLLLHAVSQKLRVVDLQDMSFGKYLLRDISQSGLSCQVLNLRSSHFRKLNMIGKFMQMQT 182
           L L+ A +QKLR VDLQD  FGK  LR++SQ GL+CQ+LNLRSSHFRKLNM GKFMQ+ T
Sbjct: 82  LSLMRAFNQKLRAVDLQDSPFGKDFLRELSQRGLACQILNLRSSHFRKLNMAGKFMQIHT 141

Query: 183 LNLDFSASLTSFQESCFTCMPNLKCLSLCETRVSNLWTTSAALAKLTSLIELRFQNSLSW 362
           LNLDFS SLTSF E CFTCMPNL CLS+CETRV+NLWTT +AL+KL+ L+ELRFQ  L  
Sbjct: 142 LNLDFSTSLTSFLEDCFTCMPNLICLSMCETRVANLWTTISALSKLSCLVELRFQKWLCN 201

Query: 363 DEIVGSCYGSSGGNAED 413
           D    S   SSGGN ED
Sbjct: 202 DS--ASPSASSGGNLED 216


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