BLASTX nr result

ID: Panax21_contig00039016 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00039016
         (669 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16216.3| unnamed protein product [Vitis vinifera]              209   5e-52
ref|XP_002330909.1| predicted protein [Populus trichocarpa] gi|2...   194   1e-47
gb|ABD32315.1| CCT [Medicago truncatula]                              176   3e-42
ref|XP_003597300.1| Zinc finger protein CONSTANS-like protein [M...   176   3e-42
ref|XP_003606565.1| Zinc finger protein CONSTANS-like protein [M...   174   2e-41

>emb|CBI16216.3| unnamed protein product [Vitis vinifera]
          Length = 251

 Score =  209 bits (531), Expect = 5e-52
 Identities = 112/183 (61%), Positives = 140/183 (76%), Gaps = 5/183 (2%)
 Frame = -1

Query: 669 GSPSSLTSYGTTQ----MQRSLSSHSL-HKNVSVFQYHQPTEFLDSDSSPMRKVFSTGDL 505
           GS SSLT+  +TQ    +QRS+SSHSL H           +EFL+S+S P+R+V+STGDL
Sbjct: 74  GSSSSLTTSYSTQRPSFIQRSVSSHSLQHNGRHPHPISLVSEFLESES-PVRRVYSTGDL 132

Query: 504 HRMNMVQHNDRSESPVSNESSIIEGVNARATRYGPEEKKERIERYRSKRNQRNFNKKIKY 325
            R+NM+QH+ R E  +SN++SIIEG+  +A+RY PEEKKERIERYRSKRNQRNFNKKIKY
Sbjct: 133 QRINMMQHHHRPEISISNDTSIIEGMMTKASRYSPEEKKERIERYRSKRNQRNFNKKIKY 192

Query: 324 VCRKTLADSRPRIRGRFARNDEIEKTPQNEWNHLHMAGDRQGLEYYDENWISFLDAISAN 145
            CRKTLADSRPRIRGRFARN+EIEK  Q++W++L      +  E  D+NW +FLDA SAN
Sbjct: 193 ACRKTLADSRPRIRGRFARNEEIEKGSQSQWSNL----GGEECEEDDDNWTNFLDAFSAN 248

Query: 144 LIP 136
           L+P
Sbjct: 249 LVP 251


>ref|XP_002330909.1| predicted protein [Populus trichocarpa] gi|222872731|gb|EEF09862.1|
           predicted protein [Populus trichocarpa]
          Length = 227

 Score =  194 bits (494), Expect = 1e-47
 Identities = 104/180 (57%), Positives = 126/180 (70%), Gaps = 5/180 (2%)
 Frame = -1

Query: 660 SSLTSYGTTQMQRSLSSHSLHKNVSVFQYH-----QPTEFLDSDSSPMRKVFSTGDLHRM 496
           S  +SYG+    RS+SSHS  KN     YH      P +FLD D+SP+R+VFSTGDL   
Sbjct: 62  SGCSSYGSPSSLRSISSHSFQKN----GYHCHFASHPHDFLDMDTSPVRRVFSTGDL--- 114

Query: 495 NMVQHNDRSESPVSNESSIIEGVNARATRYGPEEKKERIERYRSKRNQRNFNKKIKYVCR 316
              QH  R+ESP+ +ESS+I    ++A +Y PEEKKERIERYRSKRNQRNFNKKIKY CR
Sbjct: 115 ---QHGHRAESPLLSESSLIIESMSKACKYSPEEKKERIERYRSKRNQRNFNKKIKYECR 171

Query: 315 KTLADSRPRIRGRFARNDEIEKTPQNEWNHLHMAGDRQGLEYYDENWISFLDAISANLIP 136
           K LADSRPRIRGRFARNDEIEK PQ +W+++    D +     D+NWI FLD+ S N +P
Sbjct: 172 KILADSRPRIRGRFARNDEIEKNPQLQWSNVSGEEDEED----DDNWIDFLDSFSENSVP 227


>gb|ABD32315.1| CCT [Medicago truncatula]
          Length = 251

 Score =  176 bits (447), Expect = 3e-42
 Identities = 106/184 (57%), Positives = 126/184 (68%), Gaps = 7/184 (3%)
 Frame = -1

Query: 669 GSPSSLTSYGTTQMQRSLSSHSLHKNVSVFQYHQPTEF---LDSDSSPMRKVFSTGDLHR 499
           GSPS  T      MQRS+SSHSL  N     Y     F   LDSD +P+RKV STGDL R
Sbjct: 61  GSPSPSTPI---LMQRSISSHSLQYNNGTHHYPLSAFFADLLDSDDAPVRKVCSTGDLQR 117

Query: 498 MNMVQHNDRS--ESPVSNESS-IIEGVNARATRYGPEEKKERIERYRSKRNQRNFNKKIK 328
           +N +QHN     +SP+S+ESS IIEG++ R   Y PEEKK RIERYR KRNQRNFNKKIK
Sbjct: 118 INGMQHNHHHHVDSPLSSESSMIIEGMS-RVCPYSPEEKKVRIERYRIKRNQRNFNKKIK 176

Query: 327 YVCRKTLADSRPRIRGRFARNDEIEKTPQNEWNHLHMAGDRQGLEYYDENWISFLDAI-S 151
           YVCRKTLAD RPRIRGRFARNDEI+K P  EW+H+   G  +  +  DE W +  ++I +
Sbjct: 177 YVCRKTLADRRPRIRGRFARNDEIDKKPIVEWSHI---GGGEEEDEEDEKWNNIFNSIVA 233

Query: 150 ANLI 139
           ANL+
Sbjct: 234 ANLV 237


>ref|XP_003597300.1| Zinc finger protein CONSTANS-like protein [Medicago truncatula]
           gi|355486348|gb|AES67551.1| Zinc finger protein
           CONSTANS-like protein [Medicago truncatula]
          Length = 227

 Score =  176 bits (447), Expect = 3e-42
 Identities = 106/184 (57%), Positives = 126/184 (68%), Gaps = 7/184 (3%)
 Frame = -1

Query: 669 GSPSSLTSYGTTQMQRSLSSHSLHKNVSVFQYHQPTEF---LDSDSSPMRKVFSTGDLHR 499
           GSPS  T      MQRS+SSHSL  N     Y     F   LDSD +P+RKV STGDL R
Sbjct: 37  GSPSPSTPI---LMQRSISSHSLQYNNGTHHYPLSAFFADLLDSDDAPVRKVCSTGDLQR 93

Query: 498 MNMVQHNDRS--ESPVSNESS-IIEGVNARATRYGPEEKKERIERYRSKRNQRNFNKKIK 328
           +N +QHN     +SP+S+ESS IIEG++ R   Y PEEKK RIERYR KRNQRNFNKKIK
Sbjct: 94  INGMQHNHHHHVDSPLSSESSMIIEGMS-RVCPYSPEEKKVRIERYRIKRNQRNFNKKIK 152

Query: 327 YVCRKTLADSRPRIRGRFARNDEIEKTPQNEWNHLHMAGDRQGLEYYDENWISFLDAI-S 151
           YVCRKTLAD RPRIRGRFARNDEI+K P  EW+H+   G  +  +  DE W +  ++I +
Sbjct: 153 YVCRKTLADRRPRIRGRFARNDEIDKKPIVEWSHI---GGGEEEDEEDEKWNNIFNSIVA 209

Query: 150 ANLI 139
           ANL+
Sbjct: 210 ANLV 213


>ref|XP_003606565.1| Zinc finger protein CONSTANS-like protein [Medicago truncatula]
           gi|355507620|gb|AES88762.1| Zinc finger protein
           CONSTANS-like protein [Medicago truncatula]
          Length = 242

 Score =  174 bits (440), Expect = 2e-41
 Identities = 99/188 (52%), Positives = 129/188 (68%), Gaps = 10/188 (5%)
 Frame = -1

Query: 669 GSPSSLTSYGTTQMQRSLSSHSLHKNVSVFQYHQP-----TEFLDSDSSPMRKVFSTGDL 505
           GSP  L       MQRS+SSHSL KN     +H P      E LD ++ P+R+V+STGDL
Sbjct: 54  GSPDRL-------MQRSISSHSLQKND--VPHHHPFSTLFAELLDQENGPVRRVYSTGDL 104

Query: 504 HRM--NMVQHNDRSESPVSNESS-IIEGVNARATRYGPEEKKERIERYRSKRNQRNFNKK 334
            +    M Q+  +S+SP+S ES+ IIE ++  A+ Y PEEKK RIERYRSK+NQRN+NKK
Sbjct: 105 DQRVGGMQQYYHQSDSPLSTESNMIIEEMSRPASPYSPEEKKVRIERYRSKKNQRNYNKK 164

Query: 333 IKYVCRKTLADSRPRIRGRFARNDEIEKTPQNEWNHLHMAGDRQGLEYYDENWISFLDAI 154
           IKYVCRKTLADSRPRIRGRFA+NDEI + P N+W+H+    + +  E  +ENW S  D++
Sbjct: 165 IKYVCRKTLADSRPRIRGRFAKNDEIVRNPPNQWSHISNGEELEDEE--EENWDSLFDSL 222

Query: 153 --SANLIP 136
             ++NL P
Sbjct: 223 VPTSNLAP 230


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