BLASTX nr result
ID: Panax21_contig00038432
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00038432
(593 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN61858.1| hypothetical protein VITISV_016691 [Vitis vinifera] 82 1e-34
gb|AAT38747.2| Polyprotein, putative [Solanum demissum] 86 4e-33
gb|AFN88207.1| integrase core domain containing protein [Phaseol... 80 4e-31
gb|ABY49842.1| hypothetical protein [Vitis hybrid cultivar] 82 2e-30
emb|CAN71748.1| hypothetical protein VITISV_019194 [Vitis vinifera] 82 2e-30
>emb|CAN61858.1| hypothetical protein VITISV_016691 [Vitis vinifera]
Length = 763
Score = 82.4 bits (202), Expect(4) = 1e-34
Identities = 37/63 (58%), Positives = 47/63 (74%)
Frame = -2
Query: 592 EMITLEKNATWELVIPPSTASIVGCKWVYTVKVNPDGSLSRLEVRLVAKRYAQVHDVDYS 413
E+ LE N TW+LV P +VGCKWV+ VKVNPDGS++RL+ RLVA+ YAQ + VDYS
Sbjct: 285 EICALEDNHTWKLVDLPQGKKVVGCKWVFAVKVNPDGSVARLKARLVARGYAQTYGVDYS 344
Query: 412 ENF 404
+ F
Sbjct: 345 DTF 347
Score = 75.5 bits (184), Expect(4) = 1e-34
Identities = 41/84 (48%), Positives = 53/84 (63%)
Frame = -1
Query: 329 AFLHGDLKEIVYMKQPPSFIAQGESGA*FVN*RNR*MD*NNHHKALFGKFT*TILRFGML 150
AFLHGDL+E VY++QPP F+AQGE G +A FGKF+ I FGM
Sbjct: 378 AFLHGDLEEEVYLEQPPGFVAQGEYG--------------KSPRAWFGKFSKEIQAFGMN 423
Query: 149 RCNCDHSLFHRESSAGKILLIVYV 78
+ DHS+F+++S AG ILL+VYV
Sbjct: 424 KSEKDHSVFYKKSVAGIILLVVYV 447
Score = 27.7 bits (60), Expect(4) = 1e-34
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = -3
Query: 393 SSVRLLIFLVASQHGPLHQLD 331
+SVRL I +VASQ +HQLD
Sbjct: 354 NSVRLFISIVASQQWMIHQLD 374
Score = 26.9 bits (58), Expect(4) = 1e-34
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = -3
Query: 78 DDIVITGYDRQGIGELKSF 22
DDIVITG D I +LK+F
Sbjct: 448 DDIVITGNDHARISDLKAF 466
>gb|AAT38747.2| Polyprotein, putative [Solanum demissum]
Length = 1402
Score = 85.5 bits (210), Expect(2) = 4e-33
Identities = 42/84 (50%), Positives = 59/84 (70%)
Frame = -1
Query: 329 AFLHGDLKEIVYMKQPPSFIAQGESGA*FVN*RNR*MD*NNHHKALFGKFT*TILRFGML 150
AFLHGDL+E VYM+QPP F+AQGE+G + + +A FGKF+ + +FG+
Sbjct: 1026 AFLHGDLQEEVYMEQPPGFVAQGENGK-VCHLKKPLYGLKQSPRAWFGKFSEVVQKFGLT 1084
Query: 149 RCNCDHSLFHRESSAGKILLIVYV 78
+ NCDHS+F+R+S+ G ILL+VYV
Sbjct: 1085 KSNCDHSVFYRQSAVGIILLVVYV 1108
Score = 81.6 bits (200), Expect(2) = 4e-33
Identities = 37/63 (58%), Positives = 46/63 (73%)
Frame = -2
Query: 592 EMITLEKNATWELVIPPSTASIVGCKWVYTVKVNPDGSLSRLEVRLVAKRYAQVHDVDYS 413
E+ L+ N TW LV P VGCKWV+T+KVNPDGS++RL+ RLVAK YAQ + VDYS
Sbjct: 933 EIHALDDNHTWNLVDLPKGKKAVGCKWVFTIKVNPDGSMARLKARLVAKGYAQTYGVDYS 992
Query: 412 ENF 404
+ F
Sbjct: 993 DTF 995
>gb|AFN88207.1| integrase core domain containing protein [Phaseolus vulgaris]
Length = 1387
Score = 80.5 bits (197), Expect(2) = 4e-31
Identities = 41/84 (48%), Positives = 53/84 (63%)
Frame = -1
Query: 329 AFLHGDLKEIVYMKQPPSFIAQGESGA*FVN*RNR*MD*NNHHKALFGKFT*TILRFGML 150
AFL+GDL+E +YM+QPP F+AQGES R +A FGKF+ + +FGM
Sbjct: 988 AFLNGDLQEEIYMEQPPGFVAQGESSGLVCRLRKSLYGLKQSPRAWFGKFSNVVQQFGMT 1047
Query: 149 RCNCDHSLFHRESSAGKILLIVYV 78
R DHS+F+R SS G I L+VYV
Sbjct: 1048 RSEADHSVFYRHSSVGCIYLVVYV 1071
Score = 80.1 bits (196), Expect(2) = 4e-31
Identities = 34/63 (53%), Positives = 45/63 (71%)
Frame = -2
Query: 592 EMITLEKNATWELVIPPSTASIVGCKWVYTVKVNPDGSLSRLEVRLVAKRYAQVHDVDYS 413
EM L+ N TWELV PS S+VGC+WV+ +KV PDG++ RL+ RLVAK Y Q+ +DY
Sbjct: 895 EMNALQNNGTWELVPLPSRKSVVGCRWVFAIKVGPDGTIDRLKARLVAKGYTQIFGLDYG 954
Query: 412 ENF 404
+ F
Sbjct: 955 DTF 957
>gb|ABY49842.1| hypothetical protein [Vitis hybrid cultivar]
Length = 1382
Score = 82.4 bits (202), Expect(2) = 2e-30
Identities = 37/63 (58%), Positives = 47/63 (74%)
Frame = -2
Query: 592 EMITLEKNATWELVIPPSTASIVGCKWVYTVKVNPDGSLSRLEVRLVAKRYAQVHDVDYS 413
E+ LE N TW+LV P +VGCKWV+ VKVNPDGS++RL+ RLVA+ YAQ + VDYS
Sbjct: 891 EICALEDNHTWKLVDLPQGKKVVGCKWVFAVKVNPDGSVARLKARLVARGYAQTYGVDYS 950
Query: 412 ENF 404
+ F
Sbjct: 951 DTF 953
Score = 75.5 bits (184), Expect(2) = 2e-30
Identities = 41/84 (48%), Positives = 55/84 (65%)
Frame = -1
Query: 329 AFLHGDLKEIVYMKQPPSFIAQGESGA*FVN*RNR*MD*NNHHKALFGKFT*TILRFGML 150
AFLHGDL+E VY++QPP F+AQGE G + +A FGKF+ I FGM
Sbjct: 984 AFLHGDLEEEVYLEQPPGFVAQGEYGK-VCRLKKALYGLKQSPRAWFGKFSKEIQAFGMN 1042
Query: 149 RCNCDHSLFHRESSAGKILLIVYV 78
+ DHS+F+++S+AG ILL+VYV
Sbjct: 1043 KSEKDHSVFYKKSAAGIILLVVYV 1066
>emb|CAN71748.1| hypothetical protein VITISV_019194 [Vitis vinifera]
Length = 1306
Score = 82.4 bits (202), Expect(2) = 2e-30
Identities = 37/63 (58%), Positives = 47/63 (74%)
Frame = -2
Query: 592 EMITLEKNATWELVIPPSTASIVGCKWVYTVKVNPDGSLSRLEVRLVAKRYAQVHDVDYS 413
E+ LE N TW+LV P +VGCKWV+ VKVNPDGS++RL+ RLVA+ YAQ + VDYS
Sbjct: 851 EICALEDNHTWKLVDLPQGKKVVGCKWVFAVKVNPDGSVARLKARLVARGYAQTYGVDYS 910
Query: 412 ENF 404
+ F
Sbjct: 911 DTF 913
Score = 75.5 bits (184), Expect(2) = 2e-30
Identities = 41/84 (48%), Positives = 55/84 (65%)
Frame = -1
Query: 329 AFLHGDLKEIVYMKQPPSFIAQGESGA*FVN*RNR*MD*NNHHKALFGKFT*TILRFGML 150
AFLHGDL+E VY++QPP F+AQGE G + +A FGKF+ I FGM
Sbjct: 944 AFLHGDLEEEVYLEQPPGFVAQGEYGK-VCRLKKALYGLKQSPRAWFGKFSKEIQAFGMN 1002
Query: 149 RCNCDHSLFHRESSAGKILLIVYV 78
+ DHS+F+++S+AG ILL+VYV
Sbjct: 1003 KSEKDHSVFYKKSAAGIILLVVYV 1026