BLASTX nr result

ID: Panax21_contig00038423 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00038423
         (820 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320976.1| predicted protein [Populus trichocarpa] gi|2...   183   5e-44
emb|CAN78916.1| hypothetical protein VITISV_032223 [Vitis vinifera]   181   2e-43
ref|XP_002270319.1| PREDICTED: histidine kinase CKI1-like [Vitis...   179   5e-43
ref|XP_002312692.1| predicted protein [Populus trichocarpa] gi|2...   177   3e-42
ref|XP_002333975.1| predicted protein [Populus trichocarpa] gi|2...   172   6e-41

>ref|XP_002320976.1| predicted protein [Populus trichocarpa] gi|222861749|gb|EEE99291.1|
            predicted protein [Populus trichocarpa]
          Length = 1130

 Score =  183 bits (464), Expect = 5e-44
 Identities = 107/262 (40%), Positives = 161/262 (61%), Gaps = 8/262 (3%)
 Frame = +1

Query: 25   STLFHSPKVEGSQVVLFIQSEERLKVAKKTLERRGINVYAIMHYELLSSTLRNIKQKLLL 204
            S L  SPK+EGS VVL IQ+EERL+ ++K +E  GI V ++  +E L STL+ IK +  +
Sbjct: 710  SILGSSPKIEGSHVVLLIQNEERLRSSQKYIEGLGIKVSSVKEWEHLHSTLKRIKARQNV 769

Query: 205  FPNNSSGRSDVNSIRSDCLSQGISQNSSTRSKEVHLSVLDGIDQAPPTKRRNSIRTTTSF 384
             P++SSG+SD+ S RSD  +       S   K+V LS +DGIDQ P     +++R    F
Sbjct: 770  SPHSSSGKSDLGS-RSDHFN-------SRSMKDVPLSSMDGIDQKPSASGSSNLRGAPGF 821

Query: 385  ILIVIDTNGGPFRELSRAVAEFRKDLCNICSRVVWIDRPGASNIHSQGLDEDKLPPNDLI 564
            +L+VID   GPF+EL R VAEF++DL + C +VVW+D+P + +I+ +  ++D + P D I
Sbjct: 822  VLLVIDAGAGPFQELCRVVAEFKRDLHSSCCKVVWLDKPTSRSINLRSFEQDLIDPRDDI 881

Query: 565  IFKPFHGSRLHQLIGILPEFGGITPAANVETLHQFAAGNV------TSEASTSRTQMR-P 723
            + KPFHGSRL+Q+I +LPEFGG    +  +  +   A N       +S   + +T+++ P
Sbjct: 882  LLKPFHGSRLYQVIRLLPEFGGHELISRSKRENAIQATNALKDPGSSSSTHSQKTKLKVP 941

Query: 724  NLPMNSSAQKHGEI-GGPRNEK 786
            +   NS  Q   +  G  +NEK
Sbjct: 942  STCENSFQQVDSQAEGSSKNEK 963


>emb|CAN78916.1| hypothetical protein VITISV_032223 [Vitis vinifera]
          Length = 1143

 Score =  181 bits (459), Expect = 2e-43
 Identities = 107/271 (39%), Positives = 157/271 (57%), Gaps = 11/271 (4%)
 Frame = +1

Query: 40   SPKVEGSQVVLFIQSEERLKVAKKTLERRGINVYAIMHYELLSSTLRNIKQKLLLFPNNS 219
            SP+ EGS V++ +QS+ER ++ ++  E  GI V  +  +E     L+ I++K+ L   +S
Sbjct: 756  SPRAEGSHVIILMQSDERRRITQRLFETLGIKVSVLKEWERFLYALKKIRRKVSLSHRSS 815

Query: 220  SGRSDVN--SIRSDCLSQGISQNSSTRSKEVHLSVLDGIDQAPPTKRRNSIRTTTSFILI 393
            SG S+ +  S RS   S      S+   K++ LS +DG D   PT R+   R T  FILI
Sbjct: 816  SGISEFSPRSFRSGSFS------SNAGPKDMPLSAMDGTDLTLPTPRKTYARGTPRFILI 869

Query: 394  VIDTNGGPFRELSRAVAEFRKDLCNICSRVVWIDRPGASNIHSQGLDEDKLPPNDLIIFK 573
            +I+   GPF EL RAVAEFRKDL N C R VW+D+P   +++ + + E+ + PNDL++ K
Sbjct: 870  LIEATAGPFPELCRAVAEFRKDLQNTCCRAVWLDKPTLRSVNFRDVPEEMISPNDLVMLK 929

Query: 574  PFHGSRLHQLIGILPEFGGITPAANVETLHQFAAG----NVTSEASTSRTQMRPN----- 726
            PFHGSRL+Q+  +LPEFGG  P   +  + Q        +++S  +T+RT  R +     
Sbjct: 930  PFHGSRLYQVAKLLPEFGG--PMLGISAISQVGKAGPELSLSSLPTTNRTTPRKSRSXVR 987

Query: 727  LPMNSSAQKHGEIGGPRNEKPLNGKTVLVAE 819
            L   S  Q   E+G   N+ PL GK VL+AE
Sbjct: 988  LVKESEIQ---EVGTSSNQNPLRGKRVLIAE 1015


>ref|XP_002270319.1| PREDICTED: histidine kinase CKI1-like [Vitis vinifera]
          Length = 1110

 Score =  179 bits (455), Expect = 5e-43
 Identities = 104/268 (38%), Positives = 156/268 (58%), Gaps = 8/268 (2%)
 Frame = +1

Query: 40   SPKVEGSQVVLFIQSEERLKVAKKTLERRGINVYAIMHYELLSSTLRNIKQKLLLFPNNS 219
            SP+ EGS V++ +QS+ER ++ ++  E  GI V  +  +E     L+ I++K+ L   +S
Sbjct: 723  SPRAEGSHVIILMQSDERRRITQRLFETLGIKVSVLKEWERFLYALKKIRRKVSLSHRSS 782

Query: 220  SGRSDVN--SIRSDCLSQGISQNSSTRSKEVHLSVLDGIDQAPPTKRRNSIRTTTSFILI 393
            SG S+ +  S RS   S      S+   K++ LS +DG D   PT R+   R T  FILI
Sbjct: 783  SGISEFSPRSFRSGSFS------SNAGPKDMPLSAMDGTDLTLPTPRKTYARGTPRFILI 836

Query: 394  VIDTNGGPFRELSRAVAEFRKDLCNICSRVVWIDRPGASNIHSQGLDEDKLPPNDLIIFK 573
            +I+   GPF EL RAVAEFRKDL N C R VW+D+P   +++ + + E+ + PNDL++ K
Sbjct: 837  LIEATAGPFPELCRAVAEFRKDLQNTCCRAVWLDKPTLRSVNFRDVPEEMISPNDLVMLK 896

Query: 574  PFHGSRLHQLIGILPEFGGITPAANVETLHQFAAG----NVTSEASTSRTQMRPNLPMNS 741
            PFHGSRL+Q+  +LPEFGG  P   +  + Q        +++S  +T+RT  R +     
Sbjct: 897  PFHGSRLYQVAKLLPEFGG--PMLGISAISQVGKAGPEPSLSSLPTTNRTTPRKSRSRVR 954

Query: 742  SAQKH--GEIGGPRNEKPLNGKTVLVAE 819
              ++    E+G   N+ PL GK VL+AE
Sbjct: 955  LVKEPEIQEVGTSSNQNPLRGKRVLIAE 982


>ref|XP_002312692.1| predicted protein [Populus trichocarpa] gi|222852512|gb|EEE90059.1|
            predicted protein [Populus trichocarpa]
          Length = 1136

 Score =  177 bits (449), Expect = 3e-42
 Identities = 102/248 (41%), Positives = 149/248 (60%), Gaps = 4/248 (1%)
 Frame = +1

Query: 25   STLFHSPKVEGSQVVLFIQSEERLKVAKKTLERRGINVYAIMHYELLSSTLRNIKQKLLL 204
            S L  SPK+EGS VVL IQ+EERL+ + K +E  GI   ++  ++ L STL+ IK +  +
Sbjct: 710  SILGSSPKIEGSHVVLLIQNEERLRSSHKYIEGLGIKASSVKQWKHLHSTLKRIKVRQNV 769

Query: 205  FPNNSSGRSDVNSIRSDCLSQGISQNSSTRSKEVHLSVLDGIDQAPPTKRRNSIRTTTSF 384
             P  SSG+SD+ S RSD  +       S   K+V L+ +DGIDQ P   R +++R  + F
Sbjct: 770  SPYGSSGKSDLGS-RSDHFN-------SRSMKDVPLNSMDGIDQKPSASRSSNLRGASGF 821

Query: 385  ILIVIDTNGGPFRELSRAVAEFRKDLCNICSRVVWIDRPGASNIHSQGLDEDKLPPNDLI 564
            +L+VID   GPF+EL R VAEF++DL + C +VVW+D+P + +I+ +G + D + P D I
Sbjct: 822  VLLVIDAGAGPFQELCRVVAEFKRDLPSSCYKVVWLDKPTSRSINLRGFEHDLINPRDDI 881

Query: 565  IFKPFHGSRLHQLIGILPEFGGIT----PAANVETLHQFAAGNVTSEASTSRTQMRPNLP 732
            + KPFHGSRL+Q+I +LPEFG       P ++  T  Q     V S    S  Q+     
Sbjct: 882  LLKPFHGSRLYQVIRLLPEFGATNALKDPGSSSSTHSQGTKLKVPSTCENSFQQVDSQAE 941

Query: 733  MNSSAQKH 756
             +S  +K+
Sbjct: 942  GSSKNEKN 949


>ref|XP_002333975.1| predicted protein [Populus trichocarpa] gi|222839404|gb|EEE77741.1|
            predicted protein [Populus trichocarpa]
          Length = 1119

 Score =  172 bits (437), Expect = 6e-41
 Identities = 99/248 (39%), Positives = 147/248 (59%), Gaps = 4/248 (1%)
 Frame = +1

Query: 25   STLFHSPKVEGSQVVLFIQSEERLKVAKKTLERRGINVYAIMHYELLSSTLRNIKQKLLL 204
            S L  SPK+EGS VVL IQ+EERL+ ++K +E  GI V ++  +E L STL+ IK +  +
Sbjct: 710  SILSSSPKIEGSHVVLLIQNEERLRSSQKYIEGLGIKVSSVKQWEHLHSTLKRIKARQNV 769

Query: 205  FPNNSSGRSDVNSIRSDCLSQGISQNSSTRSKEVHLSVLDGIDQAPPTKRRNSIRTTTSF 384
             P++SSG+SD  + RS               K+V LS +DGIDQ     R +++R    F
Sbjct: 770  SPHSSSGKSDHFNSRS--------------MKDVPLSSMDGIDQKLSASRNSNLRGAPGF 815

Query: 385  ILIVIDTNGGPFRELSRAVAEFRKDLCNICSRVVWIDRPGASNIHSQGLDEDKLPPNDLI 564
            +L+VID   GPF+EL R VAEF++DL + C +VVW+D+  + +++ +G ++D + P D I
Sbjct: 816  VLLVIDAGAGPFQELCRVVAEFKRDLHSSCCKVVWLDKQTSRSMNLRGFEQDLIDPRDDI 875

Query: 565  IFKPFHGSRLHQLIGILPEFGGIT----PAANVETLHQFAAGNVTSEASTSRTQMRPNLP 732
            + KPFHGSRL+Q+I +LPEFG       P ++  T  Q     V S    S  Q+     
Sbjct: 876  LLKPFHGSRLYQVIRLLPEFGATNVLKDPGSSSSTHSQKTKLKVPSTCENSFQQVDSQAE 935

Query: 733  MNSSAQKH 756
             +S  +K+
Sbjct: 936  GSSKNEKN 943


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