BLASTX nr result

ID: Panax21_contig00038365 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00038365
         (403 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299827.1| predicted protein [Populus trichocarpa] gi|2...   183   1e-44
ref|XP_002314123.1| predicted protein [Populus trichocarpa] gi|2...   182   2e-44
ref|XP_002280403.1| PREDICTED: uncharacterized protein LOC100244...   176   2e-42
ref|XP_002525595.1| DNA binding protein, putative [Ricinus commu...   164   5e-39
emb|CBI16001.3| unnamed protein product [Vitis vinifera]              157   9e-37

>ref|XP_002299827.1| predicted protein [Populus trichocarpa] gi|222847085|gb|EEE84632.1|
           predicted protein [Populus trichocarpa]
          Length = 302

 Score =  183 bits (464), Expect = 1e-44
 Identities = 91/130 (70%), Positives = 100/130 (76%)
 Frame = +1

Query: 1   YFIRQHSGGKDKRRASIHDITTVNLNDNQTPSPDNKRTPSPDQPNTLSHHPNSAAMGRTP 180
           YFIRQ SGGKDKRRASIHDITTVNLND +TPSPDNKR PSPDQP  +S  PNSAAM RT 
Sbjct: 175 YFIRQLSGGKDKRRASIHDITTVNLNDARTPSPDNKR-PSPDQPGAISQQPNSAAMPRTH 233

Query: 181 FQWNQPNNVAAAMDFNQTNGNMFASSPYGLSSYGLEVQGHNLKRAATYDSYMGLHDMVFQ 360
           FQWNQPN     + FN TN NMF S+PYG+SSYGL++QG NL R A +DSY+    M FQ
Sbjct: 234 FQWNQPNG-GGTLAFNSTNANMFMSAPYGISSYGLKMQGQNLPRGAVHDSYIRQQTMGFQ 292

Query: 361 M*SGLHYPHG 390
           M S  HYPHG
Sbjct: 293 MPSAHHYPHG 302


>ref|XP_002314123.1| predicted protein [Populus trichocarpa] gi|222850531|gb|EEE88078.1|
           predicted protein [Populus trichocarpa]
          Length = 308

 Score =  182 bits (462), Expect = 2e-44
 Identities = 91/130 (70%), Positives = 101/130 (77%)
 Frame = +1

Query: 1   YFIRQHSGGKDKRRASIHDITTVNLNDNQTPSPDNKRTPSPDQPNTLSHHPNSAAMGRTP 180
           YFIRQ SGGKDKRRASIHDITTVNLN+ +TPSPDNKRT SPDQ   +S  PNSAAM RT 
Sbjct: 181 YFIRQLSGGKDKRRASIHDITTVNLNETRTPSPDNKRT-SPDQSGAISQQPNSAAMPRTH 239

Query: 181 FQWNQPNNVAAAMDFNQTNGNMFASSPYGLSSYGLEVQGHNLKRAATYDSYMGLHDMVFQ 360
           FQWNQPN+  A M FN TN NMF SSPYG++SYGL++QG N  R A +DSY+G   M FQ
Sbjct: 240 FQWNQPNS-GATMAFNSTNANMFMSSPYGINSYGLKMQGQNPHRGAVHDSYIGQQTMGFQ 298

Query: 361 M*SGLHYPHG 390
           M S  HYPHG
Sbjct: 299 MQSAQHYPHG 308


>ref|XP_002280403.1| PREDICTED: uncharacterized protein LOC100244960 [Vitis vinifera]
           gi|147844863|emb|CAN81229.1| hypothetical protein
           VITISV_033664 [Vitis vinifera]
          Length = 307

 Score =  176 bits (446), Expect = 2e-42
 Identities = 87/130 (66%), Positives = 101/130 (77%)
 Frame = +1

Query: 1   YFIRQHSGGKDKRRASIHDITTVNLNDNQTPSPDNKRTPSPDQPNTLSHHPNSAAMGRTP 180
           YFIRQ SGGKDKRRASIHDITTVNL D +TPSP+NKR PSPDQ   +   PNSA M RT 
Sbjct: 179 YFIRQLSGGKDKRRASIHDITTVNLTDTRTPSPENKRPPSPDQSIGVPKQPNSAPMNRTT 238

Query: 181 FQWNQPNNVAAAMDFNQTNGNMFASSPYGLSSYGLEVQGHNLKRAATYDSYMGLHDMVFQ 360
           FQW+QPN+  A M FN T+GN+F SSPYG++SYGL++QG NL RAA  +SY+G   MVFQ
Sbjct: 239 FQWSQPNS-GAPMAFNPTHGNIFMSSPYGMNSYGLKMQGQNLHRAAFNESYIGPQSMVFQ 297

Query: 361 M*SGLHYPHG 390
           M S  H+PHG
Sbjct: 298 MQSTPHFPHG 307


>ref|XP_002525595.1| DNA binding protein, putative [Ricinus communis]
           gi|223535031|gb|EEF36713.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 307

 Score =  164 bits (416), Expect = 5e-39
 Identities = 79/130 (60%), Positives = 97/130 (74%)
 Frame = +1

Query: 1   YFIRQHSGGKDKRRASIHDITTVNLNDNQTPSPDNKRTPSPDQPNTLSHHPNSAAMGRTP 180
           YFIRQ SGGKDKRRASIHDITTVNLN+ +TPSP+NKR  SPDQ +  S   N  ++ RT 
Sbjct: 179 YFIRQLSGGKDKRRASIHDITTVNLNEIRTPSPENKRQASPDQSSVFSQQSNGVSLPRTH 238

Query: 181 FQWNQPNNVAAAMDFNQTNGNMFASSPYGLSSYGLEVQGHNLKRAATYDSYMGLHDMVFQ 360
           FQWNQPN+  A M FN TNGNMF SS YG++SYG+++QG+NL   + ++SY+G   + FQ
Sbjct: 239 FQWNQPNS-GAIMAFNSTNGNMFTSSTYGVNSYGMKLQGYNLHSGSLHESYIGPQTIAFQ 297

Query: 361 M*SGLHYPHG 390
           M S  HYP G
Sbjct: 298 MQSAQHYPDG 307


>emb|CBI16001.3| unnamed protein product [Vitis vinifera]
          Length = 215

 Score =  157 bits (397), Expect = 9e-37
 Identities = 81/130 (62%), Positives = 94/130 (72%)
 Frame = +1

Query: 1   YFIRQHSGGKDKRRASIHDITTVNLNDNQTPSPDNKRTPSPDQPNTLSHHPNSAAMGRTP 180
           YFIRQ SGGKDKRRASIHDITTVNL D +TPSP+NKR PSPDQ               T 
Sbjct: 102 YFIRQLSGGKDKRRASIHDITTVNLTDTRTPSPENKRPPSPDQ---------------TT 146

Query: 181 FQWNQPNNVAAAMDFNQTNGNMFASSPYGLSSYGLEVQGHNLKRAATYDSYMGLHDMVFQ 360
           FQW+QPN+  A M FN T+GN+F SSPYG++SYGL++QG NL RAA  +SY+G   MVFQ
Sbjct: 147 FQWSQPNS-GAPMAFNPTHGNIFMSSPYGMNSYGLKMQGQNLHRAAFNESYIGPQSMVFQ 205

Query: 361 M*SGLHYPHG 390
           M S  H+PHG
Sbjct: 206 MQSTPHFPHG 215


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