BLASTX nr result

ID: Panax21_contig00038361 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00038361
         (602 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_007353945.1| cytochrome b6/f complex subunit IV (chloropl...   330   2e-88
ref|YP_005090209.1| petD gene product (chloroplast) [Ricinus com...   329   2e-88
ref|YP_004940540.1| petD gene product (chloroplast) [Boea hygrom...   328   3e-88
ref|YP_007025922.1| cytochrome b6/f complex subunit IV [Vacciniu...   328   4e-88
dbj|BAE47626.1| cytochrome b6/f complex subunit 4 [Lactuca sativa]    327   1e-87

>ref|YP_007353945.1| cytochrome b6/f complex subunit IV (chloroplast) [Tectona grandis]
           gi|438687634|emb|CCP47161.1| cytochrome b6/f complex
           subunit IV (chloroplast) [Tectona grandis]
           gi|438688318|emb|CCP47250.1| cytochrome b6/f complex
           subunit IV (chloroplast) [Tectona grandis]
           gi|438688442|emb|CCP47339.1| cytochrome b6/f complex
           subunit IV (chloroplast) [Tectona grandis]
          Length = 174

 Score =  330 bits (845), Expect = 2e-88
 Identities = 159/159 (100%), Positives = 159/159 (100%)
 Frame = -1

Query: 479 MSGSFGGWIYKNSPIPITKKPDLNDPVLRAKLAKGMGHNYYGEPAWPNDLLYIFPVVILG 300
           MSGSFGGWIYKNSPIPITKKPDLNDPVLRAKLAKGMGHNYYGEPAWPNDLLYIFPVVILG
Sbjct: 1   MSGSFGGWIYKNSPIPITKKPDLNDPVLRAKLAKGMGHNYYGEPAWPNDLLYIFPVVILG 60

Query: 299 TIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPA 120
           TIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPA
Sbjct: 61  TIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPA 120

Query: 119 GLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVALWLGI 3
           GLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVALWLGI
Sbjct: 121 GLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVALWLGI 159


>ref|YP_005090209.1| petD gene product (chloroplast) [Ricinus communis]
           gi|339516197|gb|AEJ82587.1| cytochrome b6/f complex
           subunit IV [Ricinus communis]
          Length = 174

 Score =  329 bits (844), Expect = 2e-88
 Identities = 158/159 (99%), Positives = 159/159 (100%)
 Frame = -1

Query: 479 MSGSFGGWIYKNSPIPITKKPDLNDPVLRAKLAKGMGHNYYGEPAWPNDLLYIFPVVILG 300
           MSGSFGGWIYKNSPIPITKKPDLNDPVLRAKLAKGMGHNYYGEPAWPNDLLYIFPVVILG
Sbjct: 1   MSGSFGGWIYKNSPIPITKKPDLNDPVLRAKLAKGMGHNYYGEPAWPNDLLYIFPVVILG 60

Query: 299 TIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPA 120
           TIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPA
Sbjct: 61  TIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPA 120

Query: 119 GLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVALWLGI 3
           GLLTVPFLENVNKFQNPFRRPVATTVFL+GTAVALWLGI
Sbjct: 121 GLLTVPFLENVNKFQNPFRRPVATTVFLVGTAVALWLGI 159


>ref|YP_004940540.1| petD gene product (chloroplast) [Boea hygrometrica]
           gi|340549438|gb|AEK53260.1| cytochrome b6/f complex
           subunit IV (chloroplast) [Boea hygrometrica]
          Length = 174

 Score =  328 bits (842), Expect = 3e-88
 Identities = 158/159 (99%), Positives = 159/159 (100%)
 Frame = -1

Query: 479 MSGSFGGWIYKNSPIPITKKPDLNDPVLRAKLAKGMGHNYYGEPAWPNDLLYIFPVVILG 300
           MSGSFGGW+YKNSPIPITKKPDLNDPVLRAKLAKGMGHNYYGEPAWPNDLLYIFPVVILG
Sbjct: 1   MSGSFGGWMYKNSPIPITKKPDLNDPVLRAKLAKGMGHNYYGEPAWPNDLLYIFPVVILG 60

Query: 299 TIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPA 120
           TIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPA
Sbjct: 61  TIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPA 120

Query: 119 GLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVALWLGI 3
           GLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVALWLGI
Sbjct: 121 GLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVALWLGI 159


>ref|YP_007025922.1| cytochrome b6/f complex subunit IV [Vaccinium macrocarpon]
           gi|374093730|gb|AEY84166.1| cytochrome b6/f complex
           subunit IV (chloroplast) [Vaccinium macrocarpon]
           gi|385198158|gb|AFI44076.1| cytochrome b6/f complex
           subunit IV [Vaccinium macrocarpon]
          Length = 174

 Score =  328 bits (841), Expect = 4e-88
 Identities = 158/159 (99%), Positives = 158/159 (99%)
 Frame = -1

Query: 479 MSGSFGGWIYKNSPIPITKKPDLNDPVLRAKLAKGMGHNYYGEPAWPNDLLYIFPVVILG 300
           MSGSFGGWIYKNSPIPITKKPDLNDPVLRAKLAKGMGHNYYGEPAWPNDLLYIFPVVILG
Sbjct: 1   MSGSFGGWIYKNSPIPITKKPDLNDPVLRAKLAKGMGHNYYGEPAWPNDLLYIFPVVILG 60

Query: 299 TIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPA 120
           TIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPA
Sbjct: 61  TIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPA 120

Query: 119 GLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVALWLGI 3
           GLLTVPFLENVNKFQNPFRRPVATTVFLIGT VALWLGI
Sbjct: 121 GLLTVPFLENVNKFQNPFRRPVATTVFLIGTVVALWLGI 159


>dbj|BAE47626.1| cytochrome b6/f complex subunit 4 [Lactuca sativa]
          Length = 174

 Score =  327 bits (837), Expect = 1e-87
 Identities = 158/159 (99%), Positives = 158/159 (99%)
 Frame = -1

Query: 479 MSGSFGGWIYKNSPIPITKKPDLNDPVLRAKLAKGMGHNYYGEPAWPNDLLYIFPVVILG 300
           MSGS GGWIYKNSPIPITKKPDLNDPVLRAKLAKGMGHNYYGEPAWPNDLLYIFPVVILG
Sbjct: 1   MSGSSGGWIYKNSPIPITKKPDLNDPVLRAKLAKGMGHNYYGEPAWPNDLLYIFPVVILG 60

Query: 299 TIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPA 120
           TIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPA
Sbjct: 61  TIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPA 120

Query: 119 GLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVALWLGI 3
           GLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVALWLGI
Sbjct: 121 GLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVALWLGI 159


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