BLASTX nr result

ID: Panax21_contig00038306 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00038306
         (440 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528976.1| conserved hypothetical protein [Ricinus comm...   115   3e-24
emb|CAN60831.1| hypothetical protein VITISV_004737 [Vitis vinifera]   110   1e-22
ref|XP_002281810.1| PREDICTED: uncharacterized protein LOC100247...   110   2e-22
ref|XP_002306324.1| predicted protein [Populus trichocarpa] gi|2...   108   6e-22
ref|XP_003532841.1| PREDICTED: uncharacterized protein LOC100793...   106   2e-21

>ref|XP_002528976.1| conserved hypothetical protein [Ricinus communis]
           gi|223531566|gb|EEF33395.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 431

 Score =  115 bits (289), Expect = 3e-24
 Identities = 73/146 (50%), Positives = 93/146 (63%), Gaps = 15/146 (10%)
 Frame = +2

Query: 47  PPPPST--TQEN--LTHTSLAIAAVLSTLGFEQLSTVADQSLFNT---TAPLTIFAPSDN 205
           PPPP +    EN   +HT+L +A +LS LGF +LST A  SL +T   + P T+FAPSD+
Sbjct: 48  PPPPISHDLHENSFFSHTAL-LAPILSHLGFTELSTAAP-SLSSTETWSGPSTLFAPSDS 105

Query: 206 SLITCPSCSVSLLLQEHSVPGLYPFHLLLSLSFGTKIQTLSPNLRCLTLTFTGLSNTT-- 379
           S+ TC SCSV  LL+EH VPGLY    L  L+FGTKI+TLSP  RCLT+T T L N    
Sbjct: 106 SIHTCLSCSVPSLLREHIVPGLYTIDYLRKLAFGTKIETLSPG-RCLTVTSTSLKNQNVN 164

Query: 380 ------LFVNGAQITHPNLFQTDHLI 439
                 +F+ G +ITHP+LF    +I
Sbjct: 165 VSSIFKVFIGGVEITHPDLFNNGLII 190


>emb|CAN60831.1| hypothetical protein VITISV_004737 [Vitis vinifera]
          Length = 412

 Score =  110 bits (275), Expect = 1e-22
 Identities = 60/141 (42%), Positives = 92/141 (65%), Gaps = 8/141 (5%)
 Frame = +2

Query: 41  RHPPPPSTTQENLT---HTSLAIAAVLSTLGFEQLS----TVADQSLFNT-TAPLTIFAP 196
           +H  P    Q N     + +     VL +LGF++L+    +++  S FNT T P T+FAP
Sbjct: 38  QHSXPSQLFQPNKDDQFYGASVFGPVLHSLGFQELAMAVHSLSASSSFNTWTGPSTVFAP 97

Query: 197 SDNSLITCPSCSVSLLLQEHSVPGLYPFHLLLSLSFGTKIQTLSPNLRCLTLTFTGLSNT 376
           +D S+ +C SCSV+ LLQEH+VPG++  H L +L+FGTKI+T+ P  RCLT+T + ++NT
Sbjct: 98  TDASIRSCSSCSVTRLLQEHTVPGIFSLHYLQTLAFGTKIETMVPG-RCLTVT-SAVNNT 155

Query: 377 TLFVNGAQITHPNLFQTDHLI 439
            +F+ G +ITHP+LF    ++
Sbjct: 156 KIFIGGVEITHPDLFNNGLIV 176


>ref|XP_002281810.1| PREDICTED: uncharacterized protein LOC100247334 [Vitis vinifera]
           gi|297737558|emb|CBI26759.3| unnamed protein product
           [Vitis vinifera]
          Length = 412

 Score =  110 bits (274), Expect = 2e-22
 Identities = 56/116 (48%), Positives = 85/116 (73%), Gaps = 5/116 (4%)
 Frame = +2

Query: 107 VLSTLGFEQLS----TVADQSLFNT-TAPLTIFAPSDNSLITCPSCSVSLLLQEHSVPGL 271
           VL +LGF++L+    +++  S FNT T P T+FAP+D S+ +C SCSV+ LLQEH+VPG+
Sbjct: 63  VLHSLGFQELAMAVHSLSASSSFNTWTGPSTVFAPTDASIRSCSSCSVTRLLQEHTVPGI 122

Query: 272 YPFHLLLSLSFGTKIQTLSPNLRCLTLTFTGLSNTTLFVNGAQITHPNLFQTDHLI 439
           +  H L +L+FGTKI+T+ P  RCLT+T + ++NT +F+ G +ITHP+LF    ++
Sbjct: 123 FSLHYLQTLAFGTKIETMVPG-RCLTVT-SAVNNTKIFIGGVEITHPDLFNNGLIV 176


>ref|XP_002306324.1| predicted protein [Populus trichocarpa] gi|222855773|gb|EEE93320.1|
           predicted protein [Populus trichocarpa]
          Length = 442

 Score =  108 bits (269), Expect = 6e-22
 Identities = 67/149 (44%), Positives = 89/149 (59%), Gaps = 18/149 (12%)
 Frame = +2

Query: 47  PPPPSTTQENL------THTSLAIAAVLSTLGFEQL-----STVADQSLFNTTAPLTIFA 193
           P P  +T ++       +HT+L +A +LS LGF QL     S  AD +    + P T+FA
Sbjct: 41  PQPQISTSDHFHDHSFSSHTNL-LAPILSHLGFTQLAMAVPSLPADSTTTAWSGPSTLFA 99

Query: 194 PSDNSLITCPSCSVSLLLQEHSVPGLYPFHLLLSLSFGTKIQTLSPNLRCLTLTFTGLSN 373
           PSD+SL TC SCS+  LL EH VPGL+    L  L+FGTKI+TLSP  RC+T+T T L N
Sbjct: 100 PSDSSLRTCFSCSIPDLLHEHIVPGLFSIDYLRKLAFGTKIETLSPG-RCITVTSTSLKN 158

Query: 374 TT-------LFVNGAQITHPNLFQTDHLI 439
            +       +F+ G +ITHP+LF    LI
Sbjct: 159 DSATPSTVKVFIGGVEITHPDLFNNGVLI 187


>ref|XP_003532841.1| PREDICTED: uncharacterized protein LOC100793476 [Glycine max]
          Length = 440

 Score =  106 bits (265), Expect = 2e-21
 Identities = 69/147 (46%), Positives = 87/147 (59%), Gaps = 16/147 (10%)
 Frame = +2

Query: 47  PPPPSTTQEN--LTHTSLAIAAVLSTLGFEQLSTVADQSLFNT--------TAPLTIFAP 196
           PPPP    E+   +HT+L +  +LS LGF QL+T A  SL +T        T P TIFAP
Sbjct: 44  PPPPPAIHEHSFFSHTAL-LPPILSHLGFHQLATAAP-SLSDTATTGSAAWTGPSTIFAP 101

Query: 197 SDNSLITCPSCSVSLLLQEHSVPGLYPFHLLLSLSFGTKIQTLSPNLRCLTLTFTGLSNT 376
           SD SL TC SCSV  LL+EH VPGL+    L  L+FGTKI+TLSP   C+T+T   L   
Sbjct: 102 SDASLRTCFSCSVPNLLREHIVPGLFTIDYLRKLAFGTKIETLSPG-HCITVTSDTLHRN 160

Query: 377 T------LFVNGAQITHPNLFQTDHLI 439
           T      +FV G +IT P+LF    ++
Sbjct: 161 TNNTAAKVFVGGVEITQPDLFNNGMVV 187


Top