BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00038305
         (455 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268821.1| PREDICTED: pentatricopeptide repeat-containi...   134   6e-30
ref|XP_002526948.1| pentatricopeptide repeat-containing protein,...   103   1e-20
ref|XP_002873660.1| pentatricopeptide repeat-containing protein ...    86   4e-15
ref|XP_003548551.1| PREDICTED: pentatricopeptide repeat-containi...    83   2e-14
ref|NP_190245.1| pentatricopeptide repeat-containing protein [Ar...    81   8e-14

>ref|XP_002268821.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46610
           [Vitis vinifera]
          Length = 763

 Score =  134 bits (338), Expect = 6e-30
 Identities = 68/150 (45%), Positives = 100/150 (66%)
 Frame = +3

Query: 6   LKKFVFCEPKRGYFGKYFASVWALENQQVGRDVVKGDSNSLDRLSKKSESECLHGVHLKG 185
           LK F+ CE KRG FG  FA  WALE Q +G + VK DSNS+  L+  +E+  +  + + G
Sbjct: 87  LKIFLLCERKRGSFGASFALAWALEQQAIGNEFVKEDSNSIHSLAGNTETVDIDCLKVDG 146

Query: 186 VKANDLSFSDDDKAKHTKNKEDFGKEKSKRIDVRALGSCLQQAKTADDVDDILKDMTEIP 365
            +  D +  D+++ K  +   +  +EKS+ +DVRAL   L+ A TADDV+++LKD  E+P
Sbjct: 147 ARDGDEN--DNEEEKEAEKNGEVIEEKSRNVDVRALAHGLEFATTADDVEEVLKDKVELP 204

Query: 366 LQVYSSLIRAFGKENKVDSALALFHWLKRK 455
           LQVYS++IR FG + ++D+A+AL  WLKRK
Sbjct: 205 LQVYSTMIRGFGTDKRLDAAMALVEWLKRK 234


>ref|XP_002526948.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223533700|gb|EEF35435.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 671

 Score =  103 bits (257), Expect = 1e-20
 Identities = 58/139 (41%), Positives = 88/139 (63%), Gaps = 2/139 (1%)
 Frame = +3

Query: 45  FGKYFASVWALENQQVGRDVVKGDSNSLDRLSKKSESECLHGVHLKGVKAND--LSFSDD 218
           F    A  WAL+ Q +  +    + +  D L  KSE E ++  +L  ++ +D   +  +D
Sbjct: 4   FRSSIAFAWALQKQDISSEFHGVEPSLDDGLLGKSEKEDVNPHNLGRLEDSDDDNNNQED 63

Query: 219 DKAKHTKNKEDFGKEKSKRIDVRALGSCLQQAKTADDVDDILKDMTEIPLQVYSSLIRAF 398
           +     ++KE  G+EK + IDVR+L   L  A+TADDV+++LKD  E+PLQVYSS+I+AF
Sbjct: 64  NIELDLRSKEGVGEEKCRSIDVRSLARSLHSAQTADDVEEVLKDKGELPLQVYSSMIKAF 123

Query: 399 GKENKVDSALALFHWLKRK 455
           G +NK++SALAL  WLKR+
Sbjct: 124 GWDNKMESALALVEWLKRR 142


>ref|XP_002873660.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297319497|gb|EFH49919.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 674

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 51/151 (33%), Positives = 75/151 (49%)
 Frame = +3

Query: 3   TLKKFVFCEPKRGYFGKYFASVWALENQQVGRDVVKGDSNSLDRLSKKSESECLHGVHLK 182
           T K    CEPKR   G      WA E +++G +V   DS         S  + ++G    
Sbjct: 69  TSKVLFLCEPKRNLSGSSVGVGWATEQRELGEEVSTEDS---------SYPQTVNG---- 115

Query: 183 GVKANDLSFSDDDKAKHTKNKEDFGKEKSKRIDVRALGSCLQQAKTADDVDDILKDMTEI 362
                                   G++ + R+DVR L   L+ AKTADDVD ++K+M E+
Sbjct: 116 ------------------------GEKTNSRVDVRELAYSLRAAKTADDVDIVIKEMGEL 151

Query: 363 PLQVYSSLIRAFGKENKVDSALALFHWLKRK 455
           PLQVY ++IR FGK+ ++  A+A+  WL+RK
Sbjct: 152 PLQVYCAMIRGFGKDKRLKPAIAVVDWLRRK 182


>ref|XP_003548551.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g46610-like [Glycine max]
          Length = 808

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 49/123 (39%), Positives = 74/123 (60%), Gaps = 2/123 (1%)
 Frame = +3

Query: 93  GRDVVKGDSNSLDRLSKKSESECLHGVHLKGVKANDLS--FSDDDKAKHTKNKEDFGKEK 266
           G ++V+  ++S D L    + E +  ++L  VK +D       DD +K    +E  GK  
Sbjct: 161 GNELVEEQTDSNDALVN-GDLEGVKSLNLDQVKDSDCEGKMCGDDNSKEGGEEESDGK-- 217

Query: 267 SKRIDVRALGSCLQQAKTADDVDDILKDMTEIPLQVYSSLIRAFGKENKVDSALALFHWL 446
              +DVRAL   LQ  KT +DV  ILKD  ++PLQV+S++I  FGKE ++DSAL LF+W+
Sbjct: 218 ---VDVRALALSLQTVKTVEDVGGILKDKGDLPLQVFSTIISGFGKEKRMDSALILFNWM 274

Query: 447 KRK 455
           K++
Sbjct: 275 KKR 277


>ref|NP_190245.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75206903|sp|Q9SNB7.1|PP264_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g46610 gi|6523064|emb|CAB62331.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|332644660|gb|AEE78181.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 665

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 51/149 (34%), Positives = 73/149 (48%)
 Frame = +3

Query: 9   KKFVFCEPKRGYFGKYFASVWALENQQVGRDVVKGDSNSLDRLSKKSESECLHGVHLKGV 188
           K    CEPKR   G  F   WA E +++                +  E E         V
Sbjct: 64  KVLFLCEPKRSLLGSSFGVGWATEQREL----------------ELGEEE---------V 98

Query: 189 KANDLSFSDDDKAKHTKNKEDFGKEKSKRIDVRALGSCLQQAKTADDVDDILKDMTEIPL 368
              DLS ++             G++ + R+DVR L   L+ AKTADDVD +LKD  E+PL
Sbjct: 99  STEDLSSANG------------GEKNNLRVDVRELAFSLRAAKTADDVDAVLKDKGELPL 146

Query: 369 QVYSSLIRAFGKENKVDSALALFHWLKRK 455
           QV+ ++I+ FGK+ ++  A+A+  WLKRK
Sbjct: 147 QVFCAMIKGFGKDKRLKPAVAVVDWLKRK 175