BLASTX nr result

ID: Panax21_contig00038304 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00038304
         (741 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513597.1| Ethylene-responsive transcription factor, pu...    69   1e-17
ref|XP_002267400.1| PREDICTED: ethylene-responsive transcription...    70   1e-15
ref|XP_002331847.1| AP2/ERF domain-containing transcription fact...    65   1e-15
gb|ADE41106.1| AP2 domain class transcription factor [Malus x do...    67   3e-15
ref|XP_002317743.1| AP2/ERF domain-containing transcription fact...    65   8e-14

>ref|XP_002513597.1| Ethylene-responsive transcription factor, putative [Ricinus
           communis] gi|223547505|gb|EEF49000.1|
           Ethylene-responsive transcription factor, putative
           [Ricinus communis]
          Length = 309

 Score = 68.9 bits (167), Expect(2) = 1e-17
 Identities = 44/87 (50%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
 Frame = +2

Query: 482 R*SLRAQFRFPKVVRISVTDPDATDSSSDEE-ELFCRQRVKKYVSEINFEAACKTTVISP 658
           R S R +   P+VVRISVTDPDATDSSSDEE ELF RQRVK+YV+EI+ EAA        
Sbjct: 37  RSSCRLEHIPPRVVRISVTDPDATDSSSDEEDELFSRQRVKRYVNEISIEAASTKETNLV 96

Query: 659 INHKKKILGNYGEALQAKVKPMKAAVA 739
            + +K+   N  E      +P+K   A
Sbjct: 97  SSGRKRAAAN--ELPNTTQRPLKLNTA 121



 Score = 47.0 bits (110), Expect(2) = 1e-17
 Identities = 23/39 (58%), Positives = 28/39 (71%)
 Frame = +3

Query: 378 MDHSLLCPIKFTEHRNITKKLIKPSTHKPKKFSDSGKVS 494
           +D S+LCP+KFTEH+ ITKK  KPS  KPKK S   + S
Sbjct: 2   LDQSILCPMKFTEHKRITKKYTKPSL-KPKKPSSDERSS 39


>ref|XP_002267400.1| PREDICTED: ethylene-responsive transcription factor CRF4 [Vitis
           vinifera] gi|147838098|emb|CAN74147.1| hypothetical
           protein VITISV_018946 [Vitis vinifera]
          Length = 341

 Score = 70.5 bits (171), Expect(2) = 1e-15
 Identities = 43/75 (57%), Positives = 53/75 (70%), Gaps = 1/75 (1%)
 Frame = +2

Query: 512 PKVVRISVTDPDATDSSSDEE-ELFCRQRVKKYVSEINFEAACKTTVISPINHKKKILGN 688
           P+VVRISVTDPDATDSSSDEE ELF RQRVK+Y +EIN     K+  I+P+  +K+  G 
Sbjct: 36  PRVVRISVTDPDATDSSSDEEDELFSRQRVKRYTNEINIATVSKS--IAPVAGRKRGAG- 92

Query: 689 YGEALQAKVKPMKAA 733
            GE    + +PMK A
Sbjct: 93  AGEMAPCR-RPMKVA 106



 Score = 38.9 bits (89), Expect(2) = 1e-15
 Identities = 19/38 (50%), Positives = 25/38 (65%)
 Frame = +3

Query: 378 MDHSLLCPIKFTEHRNITKKLIKPSTHKPKKFSDSGKV 491
           MD SLL PIK+TEHR+IT K  + S   P++ S   +V
Sbjct: 1   MDQSLLYPIKYTEHRSITNKQTRQSRRPPEQNSGVPRV 38


>ref|XP_002331847.1| AP2/ERF domain-containing transcription factor [Populus
           trichocarpa] gi|222875085|gb|EEF12216.1| AP2/ERF
           domain-containing transcription factor [Populus
           trichocarpa]
          Length = 363

 Score = 64.7 bits (156), Expect(2) = 1e-15
 Identities = 36/74 (48%), Positives = 52/74 (70%), Gaps = 4/74 (5%)
 Frame = +2

Query: 512 PKVVRISVTDPDATDSSSDEEE-LFCRQRVKKYVSEINFEAACKTT---VISPINHKKKI 679
           P++VR++VTD DATDSSSDEE  LF RQRVK+YV+EI+ +A+CK T     +  N++K+ 
Sbjct: 48  PRLVRVTVTDHDATDSSSDEEGGLFGRQRVKRYVNEIDIQASCKETNAITTAVANNRKRG 107

Query: 680 LGNYGEALQAKVKP 721
           +G+  +    K  P
Sbjct: 108 VGDIPQRPAKKSAP 121



 Score = 44.3 bits (103), Expect(2) = 1e-15
 Identities = 19/31 (61%), Positives = 25/31 (80%)
 Frame = +3

Query: 378 MDHSLLCPIKFTEHRNITKKLIKPSTHKPKK 470
           +D S+LCPIK+TEH+ +TK+  KPS  KPKK
Sbjct: 2   IDQSILCPIKYTEHKKVTKQFTKPSL-KPKK 31


>gb|ADE41106.1| AP2 domain class transcription factor [Malus x domestica]
          Length = 353

 Score = 66.6 bits (161), Expect(2) = 3e-15
 Identities = 40/77 (51%), Positives = 52/77 (67%), Gaps = 1/77 (1%)
 Frame = +2

Query: 512 PKVVRISVTDPDATDSSSD-EEELFCRQRVKKYVSEINFEAACKTTVISPINHKKKILGN 688
           P++VRISVTDPDATDSSSD EEE F RQRVK YV+EIN E   + +++  IN+ +K    
Sbjct: 38  PRIVRISVTDPDATDSSSDEEEEFFGRQRVKHYVNEINIETDFRNSLV--INNGRK---R 92

Query: 689 YGEALQAKVKPMKAAVA 739
               +    +PMK AV+
Sbjct: 93  PAAEVPVNRRPMKNAVS 109



 Score = 41.2 bits (95), Expect(2) = 3e-15
 Identities = 16/24 (66%), Positives = 22/24 (91%)
 Frame = +3

Query: 378 MDHSLLCPIKFTEHRNITKKLIKP 449
           M+ S+LCPIK++EHR+ TKKL+KP
Sbjct: 1   MESSILCPIKYSEHRSTTKKLMKP 24


>ref|XP_002317743.1| AP2/ERF domain-containing transcription factor [Populus
           trichocarpa] gi|222858416|gb|EEE95963.1| AP2/ERF
           domain-containing transcription factor [Populus
           trichocarpa]
          Length = 365

 Score = 64.7 bits (156), Expect(2) = 8e-14
 Identities = 39/76 (51%), Positives = 49/76 (64%), Gaps = 3/76 (3%)
 Frame = +2

Query: 512 PKVVRISVTDPDATDSSSDEE-ELFCRQRVKKYVSEINFEAA--CKTTVISPINHKKKIL 682
           P++VR++VTD DATDSSSDEE ELF RQRVK+YVSEIN + A  CK T +      K   
Sbjct: 48  PRLVRVTVTDHDATDSSSDEEGELFGRQRVKRYVSEINIQPAAFCKETNVIATTIAKNRK 107

Query: 683 GNYGEALQAKVKPMKA 730
            + G+  Q   K + A
Sbjct: 108 RSVGDIPQKPAKRLTA 123



 Score = 38.1 bits (87), Expect(2) = 8e-14
 Identities = 14/23 (60%), Positives = 19/23 (82%)
 Frame = +3

Query: 378 MDHSLLCPIKFTEHRNITKKLIK 446
           +D S+LCPIK+TEH+ +TKK  K
Sbjct: 2   IDQSILCPIKYTEHKKVTKKFTK 24


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