BLASTX nr result

ID: Panax21_contig00038248 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00038248
         (493 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303960.1| predicted protein [Populus trichocarpa] gi|2...   260   9e-68
ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containi...   258   4e-67
ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containi...   256   1e-66
ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containi...   256   1e-66
ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containi...   252   2e-65

>ref|XP_002303960.1| predicted protein [Populus trichocarpa] gi|222841392|gb|EEE78939.1|
           predicted protein [Populus trichocarpa]
          Length = 704

 Score =  260 bits (664), Expect = 9e-68
 Identities = 121/164 (73%), Positives = 145/164 (88%)
 Frame = +1

Query: 1   VELLGRSGRLHEAWDFIQKMSIEPGMNVLGAMLGACKIHKNVDLGELAANKLFELNPQEG 180
           V+LLGR+GRL++AWDFIQKM I+PG+ V GAMLGACKIHKNVDLGE AA ++F+LNP +G
Sbjct: 477 VDLLGRAGRLNQAWDFIQKMPIKPGITVYGAMLGACKIHKNVDLGEKAAFEIFKLNPDDG 536

Query: 181 GYHVLLANIYANASMWDKVAAVRNTMVKKGIQKTPGCSLIDLKNVVHTFYSGSAWHPQSK 360
           GYHVLLANIYA ASMW KVA VR  M K G+QKTPGCSL+++ N VH+FYSG+  HPQSK
Sbjct: 537 GYHVLLANIYATASMWGKVAKVRTIMEKSGLQKTPGCSLVEIGNEVHSFYSGTTSHPQSK 596

Query: 361 RIYAFLETLIDEIKAAGYIPDTSSIHDVEDDAQEQLLNTHSEKL 492
           +IY++LETL+DEI+AAGY+PDT+SIHDVEDD + QLLNTHSEKL
Sbjct: 597 KIYSYLETLVDEIRAAGYVPDTNSIHDVEDDVKVQLLNTHSEKL 640


>ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290-like
            [Glycine max]
          Length = 816

 Score =  258 bits (659), Expect = 4e-67
 Identities = 120/164 (73%), Positives = 147/164 (89%)
 Frame = +1

Query: 1    VELLGRSGRLHEAWDFIQKMSIEPGMNVLGAMLGACKIHKNVDLGELAANKLFELNPQEG 180
            V+LLGR+GRL +AW FIQ M ++PG+ VLGAMLGAC+IHKNV+LGE  A++LF+L+P +G
Sbjct: 589  VDLLGRAGRLDDAWKFIQDMPVKPGITVLGAMLGACRIHKNVELGEKTADELFDLDPDDG 648

Query: 181  GYHVLLANIYANASMWDKVAAVRNTMVKKGIQKTPGCSLIDLKNVVHTFYSGSAWHPQSK 360
            GYHVLLAN+YA+ASMWDKVA VR  M KKGIQKTPGCSL++L+N VHTFYSGS  HPQSK
Sbjct: 649  GYHVLLANMYASASMWDKVARVRTAMEKKGIQKTPGCSLVELRNEVHTFYSGSTNHPQSK 708

Query: 361  RIYAFLETLIDEIKAAGYIPDTSSIHDVEDDAQEQLLNTHSEKL 492
            RIYA+LETL DE+KAAGY+PDT+SIHDVE+D +EQLL++HSE+L
Sbjct: 709  RIYAYLETLGDEMKAAGYVPDTNSIHDVEEDVKEQLLSSHSERL 752


>ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290-like
            [Cucumis sativus]
          Length = 821

 Score =  256 bits (655), Expect = 1e-66
 Identities = 121/164 (73%), Positives = 141/164 (85%)
 Frame = +1

Query: 1    VELLGRSGRLHEAWDFIQKMSIEPGMNVLGAMLGACKIHKNVDLGELAANKLFELNPQEG 180
            V+LLGR+GR+ EAWDFI+ M I PG+ V GAMLGACKIHKN+++GE AA KLFELNP EG
Sbjct: 594  VDLLGRAGRIKEAWDFIENMPISPGITVYGAMLGACKIHKNIEVGEKAAKKLFELNPDEG 653

Query: 181  GYHVLLANIYANASMWDKVAAVRNTMVKKGIQKTPGCSLIDLKNVVHTFYSGSAWHPQSK 360
            GYHVLLANIYA+ S W KVA VR TM KKG++KTPGCS+++L+N VH+FYSGS  HPQSK
Sbjct: 654  GYHVLLANIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGSTTHPQSK 713

Query: 361  RIYAFLETLIDEIKAAGYIPDTSSIHDVEDDAQEQLLNTHSEKL 492
            RIYAFLE L+ EIKAAGY+PDT+ I DVEDD QEQLLN+HSEKL
Sbjct: 714  RIYAFLEELVYEIKAAGYVPDTNLILDVEDDVQEQLLNSHSEKL 757


>ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290-like
            [Vitis vinifera]
          Length = 849

 Score =  256 bits (655), Expect = 1e-66
 Identities = 121/164 (73%), Positives = 146/164 (89%)
 Frame = +1

Query: 1    VELLGRSGRLHEAWDFIQKMSIEPGMNVLGAMLGACKIHKNVDLGELAANKLFELNPQEG 180
            V+LLGR+ RL+EAWDFIQKM IEP ++V GAMLGAC+IHKNV+LGE AAN++F+L+P +G
Sbjct: 622  VDLLGRANRLNEAWDFIQKMPIEPAISVFGAMLGACRIHKNVELGEKAANRIFDLDPDDG 681

Query: 181  GYHVLLANIYANASMWDKVAAVRNTMVKKGIQKTPGCSLIDLKNVVHTFYSGSAWHPQSK 360
            GYHVLLANIYA ASMWDKVA VR TM KKGIQKTPG S+++L+N VHTFYSG+  HPQ+K
Sbjct: 682  GYHVLLANIYATASMWDKVARVRTTMEKKGIQKTPGWSVVELQNEVHTFYSGTTSHPQAK 741

Query: 361  RIYAFLETLIDEIKAAGYIPDTSSIHDVEDDAQEQLLNTHSEKL 492
            +IYAFLETL + IKAAGY+PDT+S+HDVED  +EQLLN+HSEKL
Sbjct: 742  KIYAFLETLGNRIKAAGYMPDTNSVHDVEDVVKEQLLNSHSEKL 785


>ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290-like
            [Cucumis sativus]
          Length = 821

 Score =  252 bits (644), Expect = 2e-65
 Identities = 119/164 (72%), Positives = 139/164 (84%)
 Frame = +1

Query: 1    VELLGRSGRLHEAWDFIQKMSIEPGMNVLGAMLGACKIHKNVDLGELAANKLFELNPQEG 180
            V+LLGR+GR+ EAWDFI+ M I PG+ V GA  GACKIHKN+++GE AA KLFELNP EG
Sbjct: 594  VDLLGRAGRIKEAWDFIENMPISPGITVYGAXXGACKIHKNIEVGEKAAKKLFELNPDEG 653

Query: 181  GYHVLLANIYANASMWDKVAAVRNTMVKKGIQKTPGCSLIDLKNVVHTFYSGSAWHPQSK 360
            GYHVLLANIYA+ S W KVA VR TM KKG++KTPGCS+++L+N VH+FYSGS  HPQSK
Sbjct: 654  GYHVLLANIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGSTTHPQSK 713

Query: 361  RIYAFLETLIDEIKAAGYIPDTSSIHDVEDDAQEQLLNTHSEKL 492
            RIYAFLE L+ EIKAAGY+PDT+ I DVEDD QEQLLN+HSEKL
Sbjct: 714  RIYAFLEELVYEIKAAGYVPDTNLILDVEDDVQEQLLNSHSEKL 757


Top