BLASTX nr result

ID: Panax21_contig00038216 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00038216
         (950 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329827.1| f-box family protein [Populus trichocarpa] g...   143   7e-32
gb|ACU65940.1| putative DOF zinc finger protein [Jatropha curcas]     137   5e-30
ref|XP_003633022.1| PREDICTED: dof zinc finger protein DOF1.4-li...   132   9e-29
ref|XP_002509452.1| zinc finger protein, putative [Ricinus commu...   132   1e-28
emb|CBI30590.3| unnamed protein product [Vitis vinifera]              120   5e-25

>ref|XP_002329827.1| f-box family protein [Populus trichocarpa]
           gi|222870889|gb|EEF08020.1| f-box family protein
           [Populus trichocarpa]
          Length = 322

 Score =  143 bits (360), Expect = 7e-32
 Identities = 116/259 (44%), Positives = 142/259 (54%), Gaps = 45/259 (17%)
 Frame = -3

Query: 948 RSVPVGGGCRKNKRVKRPPPASALASVVDNSPSSANTAP------ISTTNPSTTINPLFY 787
           R+VPVGGGCRKNKRVKRP  A+  AS   NS SSAN  P      IS+T  S  INPLFY
Sbjct: 70  RNVPVGGGCRKNKRVKRPASAAEGAS---NSVSSANPNPQTPIDHISST--SNHINPLFY 124

Query: 786 NIH-SNP-ELNLSFPRFNNSRIDSGLVYDFDDFHP------LGFSSGQLMAND------- 652
            +  SNP E+NL FP   N R+DS  V  + D  P      LGFSSG +  ND       
Sbjct: 125 GLSGSNPSEMNLPFPGRFNPRMDSA-VSGYHDLQPQLNALALGFSSGIMTTNDANGFNPT 183

Query: 651 ------VTSQTLSSSYNSIPNFGSLNSSC-LASPTMASLLASNVQQQKFI---XXXXXXX 502
                 VTS +L SSY+++  FGS  +S    SPT+ASLLAS+  QQKF           
Sbjct: 184 KQIQDVVTSNSLLSSYSNL--FGSSTTSTNTTSPTIASLLASSFNQQKFTNSGIKESTRA 241

Query: 501 XXSFLEFGHYEDDMQME-------GMKEVKMEDCQNKL-------NQIQQIGSSDPNSVF 364
              F        ++QM        GMK VK E  QN+L       NQI+Q+G SDP S++
Sbjct: 242 PNYFQSLTVPFKELQMNGNSESGIGMKGVKTEHNQNRLDWNVPCQNQIEQVGLSDP-SMY 300

Query: 363 WSSANGVGSWLDPANIGSN 307
           W++   VGSW DPAN+GS+
Sbjct: 301 WNTNTSVGSWHDPANMGSS 319


>gb|ACU65940.1| putative DOF zinc finger protein [Jatropha curcas]
          Length = 341

 Score =  137 bits (344), Expect = 5e-30
 Identities = 105/258 (40%), Positives = 142/258 (55%), Gaps = 41/258 (15%)
 Frame = -3

Query: 948 RSVPVGGGCRKNKRVKRPPPASALASVVDNSPSSAN------TAPISTTNPSTTINPLFY 787
           R+VPVGGGCRKNKRVKR  PASA+     ++ S+AN        PI  ++ S   NPLFY
Sbjct: 87  RNVPVGGGCRKNKRVKR--PASAVEGATTSASSAANPNNHPSQTPIDISSTSNHSNPLFY 144

Query: 786 NIHSNP-ELNLSFPRFNNSRIDSGL-VYDFDDFHP------LGFS--------SGQLMAN 655
            + +NP E+NLSFP   NSR+ S + +    D  P      LGFS        S Q+   
Sbjct: 145 GLTANPSEVNLSFPGTFNSRVSSNMDIVSGYDLQPQLNALALGFSTNNGGFNPSKQIQDV 204

Query: 654 DVTSQTLSSSYNSIPNFGSLNS-SCLASPTMASLLASNVQQQKFIXXXXXXXXXSFLEFG 478
             +S +L S+Y+++  FGS NS +  ASPTMA+LLAS++ QQKF           +    
Sbjct: 205 VTSSTSLLSNYSNL--FGSSNSLTATASPTMATLLASSLHQQKFSIKDARAALNHYQSLT 262

Query: 477 HYEDDMQMEG---------MKEVKMEDCQNKL-------NQIQQIG--SSDPNSVFWSSA 352
            ++ D+QM G          KEVK+E   ++L       NQI QIG  SSDP+  + +S 
Sbjct: 263 SFQ-DLQMSGNNNESAGIATKEVKIEQDHSRLDWNMPCQNQIDQIGFSSSDPSLYWNTST 321

Query: 351 NGVGSWLDPANIGSNSVS 298
           + VG+W DP NIGS+  S
Sbjct: 322 SSVGAWHDPGNIGSSVTS 339


>ref|XP_003633022.1| PREDICTED: dof zinc finger protein DOF1.4-like [Vitis vinifera]
          Length = 309

 Score =  132 bits (333), Expect = 9e-29
 Identities = 113/266 (42%), Positives = 142/266 (53%), Gaps = 49/266 (18%)
 Frame = -3

Query: 948 RSVPVGGGCRKNKRVKRPPPASALASVVDNSPSSANTAPISTTNP--------STTINPL 793
           R+VPVGGGCRKNKRVKRP      AS VD +PSSA TA ++   P        S  + PL
Sbjct: 59  RNVPVGGGCRKNKRVKRP------ASSVD-APSSAPTAALNPPPPSQIDLSASSNHVTPL 111

Query: 792 FYNIHSNP-ELNLSFPRFNNSRIDSGLVYDFDDFHP------LGFSSGQLMAND------ 652
           FY + SNP ELNL FPRFN+   +   V  + D  P      LGFSSG ++AND      
Sbjct: 112 FYGLPSNPSELNLPFPRFNSRASNEDTVSGY-DLQPQLGALGLGFSSG-IIANDTRTDDY 169

Query: 651 -------------VTSQTLSSSYNSIPNFGSLNSSCLASPTMASLLASNVQQQKFI--XX 517
                        VTS +L S+Y+    FGS  SS   +PTMASL+ S++QQQKF+    
Sbjct: 170 RNGFNPAKQIQDLVTSSSLLSNYSI---FGS--SSSTTTPTMASLINSSLQQQKFMNGDL 224

Query: 516 XXXXXXXSFLEFGHYEDDMQMEG-----MKEVKMEDCQNKL--------NQIQQIGSSDP 376
                   F     YE D+Q+ G     MKEVK E   N L        NQI+QIGSSDP
Sbjct: 225 KESRGANHFQPLVPYE-DLQISGNTSMAMKEVKSEHGHNTLEWNSVPCQNQIEQIGSSDP 283

Query: 375 NSVFWSSANGVGSWLDPANIGSNSVS 298
            S++W +   +G+W D  N+GS+  S
Sbjct: 284 -SLYW-NLTSLGAWSDLPNMGSSVTS 307


>ref|XP_002509452.1| zinc finger protein, putative [Ricinus communis]
           gi|223549351|gb|EEF50839.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 357

 Score =  132 bits (332), Expect = 1e-28
 Identities = 107/262 (40%), Positives = 146/262 (55%), Gaps = 45/262 (17%)
 Frame = -3

Query: 948 RSVPVGGGCRKNKRVKRPPPA------SALASVVDNSPSSANTAPISTTNPSTTINPLFY 787
           R+VPVGGGCRKNKRVKRP  +      + ++SV  N+PSS  T     T+ S  IN LFY
Sbjct: 98  RNVPVGGGCRKNKRVKRPSSSGGEGTINQVSSVNPNNPSSHQTPIDHITSTSNHINHLFY 157

Query: 786 NIHSNP-ELNLSFPRFNNSRIDSGLVYDFD-----DFHPLGFSSGQLMAND--------- 652
            + +NP E+NL F RF NSR+ S +   +D     +   LGFSSG L  N+         
Sbjct: 158 GLPTNPSEMNLPFGRF-NSRVSSNMDTGYDLPPQLNALALGFSSGILGNNEANNGFNPTK 216

Query: 651 -----VTSQTLSSSYNSIPNFG-SLNSSCLASPTMASLLASNV-QQQKFIXXXXXXXXXS 493
                VTS +L ++Y+SI  FG S +S+   SP++A+LLAS++ QQ KF           
Sbjct: 217 HIQDSVTSTSLLTNYSSI--FGCSSSSTATTSPSIATLLASSLHQQNKFSVKDSNRAPNH 274

Query: 492 FLEFGHYEDDMQME--------GMKEVKMEDCQNKL-------NQIQQIG-SSDPNSVFW 361
           F     +E D+QM          MKEVK E  Q++L       NQI+Q+G SS   S++W
Sbjct: 275 FQNLTPFE-DLQMSCNSTESGIAMKEVKTEQGQSRLHWNMPCQNQIEQMGFSSSEPSLYW 333

Query: 360 S-SANGVGSWLDPANIGSNSVS 298
           + + + VG+W DPANIGS+  S
Sbjct: 334 NPNTSSVGTWHDPANIGSSVTS 355


>emb|CBI30590.3| unnamed protein product [Vitis vinifera]
          Length = 372

 Score =  120 bits (301), Expect = 5e-25
 Identities = 102/252 (40%), Positives = 133/252 (52%), Gaps = 35/252 (13%)
 Frame = -3

Query: 948 RSVPVGGGCRKNKRVKRPPPASALASVVDNSPSSANTAPISTTNPSTT--------INPL 793
           R+VPVGGGCRKNKRVKRP      AS VD +PSSA TA ++   PS          + PL
Sbjct: 151 RNVPVGGGCRKNKRVKRP------ASSVD-APSSAPTAALNPPPPSQIDLSASSNHVTPL 203

Query: 792 FYNIHSNP-ELNLSFPRFNNSRIDSGLVYDFDDFHP------LGFSSGQLMAND------ 652
           FY + SNP ELNL FPRFN+   +   V  +D   P      LGFSSG ++AND      
Sbjct: 204 FYGLPSNPSELNLPFPRFNSRASNEDTVSGYD-LQPQLGALGLGFSSG-IIANDTRTDDY 261

Query: 651 -------------VTSQTLSSSYNSIPNFGSLNSSCLASPTMASLLASNVQQQKFIXXXX 511
                        VTS +L S+Y+    FGS  SS   +PTMASL+ S++QQQKF+    
Sbjct: 262 RNGFNPAKQIQDLVTSSSLLSNYSI---FGS--SSSTTTPTMASLINSSLQQQKFMN--- 313

Query: 510 XXXXXSFLEFGHYEDDMQMEGMKEV-KMEDCQNKLNQIQQIGSSDPNSVFWSSANGVGSW 334
                     G  ++       + +     CQN   QI+QIGSSDP S++W +   +G+W
Sbjct: 314 ----------GDLKESRGANHFQPLWNSVPCQN---QIEQIGSSDP-SLYW-NLTSLGAW 358

Query: 333 LDPANIGSNSVS 298
            D  N+GS+  S
Sbjct: 359 SDLPNMGSSVTS 370


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