BLASTX nr result

ID: Panax21_contig00038164 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00038164
         (425 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002534079.1| conserved hypothetical protein [Ricinus comm...   100   2e-19
ref|XP_004142446.1| PREDICTED: uncharacterized protein LOC101211...    94   9e-18
ref|NP_196066.2| RING/U-box domain-containing protein [Arabidops...    94   1e-17
ref|NP_001190225.1| RING/U-box domain-containing protein [Arabid...    94   1e-17
emb|CAB85552.1| putative protein [Arabidopsis thaliana]                94   1e-17

>ref|XP_002534079.1| conserved hypothetical protein [Ricinus communis]
           gi|223525880|gb|EEF28302.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 831

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 67/163 (41%), Positives = 78/163 (47%), Gaps = 32/163 (19%)
 Frame = +1

Query: 7   DRPSTRASSLLQMWRELEGEHFTNHPQVRNGERPVQGRADGVNTEFGSTYLSGERGHDNV 186
           +RPSTRASS+LQMWRELE E   N  + R  ER    R+   NT   ST +S  RG +  
Sbjct: 106 ERPSTRASSILQMWRELEDEQLLNRARERVRERLRHQRSVESNTNISSTNMSESRGSEIQ 165

Query: 187 DSLVDTNEVENE---CTISHQGLQNEHDDNTSLSSE------------------------ 285
            SL D +E ENE         G QNE  DN   S E                        
Sbjct: 166 GSLGDASESENEFGPWPHERLGSQNERGDNNGSSREQSPDLGEVERERVRQIVRGWMESG 225

Query: 286 -----SNDSHLNSCSRSQWLGEKECERVRIVRDWVEKTTQQRG 399
                SN S  N   R +WLGE E ERVRIVR+WV+  +QQRG
Sbjct: 226 ISDHTSNVSQRNGSPRGEWLGETERERVRIVREWVQMASQQRG 268


>ref|XP_004142446.1| PREDICTED: uncharacterized protein LOC101211903 [Cucumis sativus]
           gi|449524776|ref|XP_004169397.1| PREDICTED:
           uncharacterized protein LOC101224364 [Cucumis sativus]
          Length = 866

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 61/164 (37%), Positives = 85/164 (51%), Gaps = 32/164 (19%)
 Frame = +1

Query: 7   DRPSTRASSLLQMWRELEGEHFTNHPQVRNGERPVQGRADGVNTEFGSTYLSGERGHDNV 186
           + PST+AS++LQMWRELE +H  N  + R  ER  Q  +   +T   ST +S  RG +N 
Sbjct: 141 ETPSTQASAILQMWRELEDDHVLNRARERVRERLRQQTSVDSSTNMSSTNMSDSRGSENQ 200

Query: 187 DSLVDTNEVENEC-TISHQGLQNEH--DDNTSLSSES----------------------- 288
            SLVD +  EN+    +H  + ++H  D+N   S E                        
Sbjct: 201 GSLVDASGSENDFGPWNHDQIASQHVRDENNGSSREQSPDLGEVERERVGQIVRGWMESG 260

Query: 289 ------NDSHLNSCSRSQWLGEKECERVRIVRDWVEKTTQQRGT 402
                 N S  +  SR++WLGE E ERVRIVR+WV+ T+QQRG+
Sbjct: 261 ISDPSPNVSERSPRSRAEWLGETERERVRIVREWVQMTSQQRGS 304


>ref|NP_196066.2| RING/U-box domain-containing protein [Arabidopsis thaliana]
           gi|334187422|ref|NP_001190224.1| RING/U-box
           domain-containing protein [Arabidopsis thaliana]
           gi|332003363|gb|AED90746.1| RING/U-box domain-containing
           protein [Arabidopsis thaliana]
           gi|332003364|gb|AED90747.1| RING/U-box domain-containing
           protein [Arabidopsis thaliana]
          Length = 863

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 62/162 (38%), Positives = 85/162 (52%), Gaps = 31/162 (19%)
 Frame = +1

Query: 7   DRPSTRASSLLQMWRELEGEHFTNHPQVRNGERPVQGRADGVNTEFGSTYLSGERGHDNV 186
           +RP+T+AS +LQMWRELE EH  N  + R  ER  Q R+   NT   S+  S  +  +N 
Sbjct: 145 ERPNTQASGILQMWRELEDEHVLNRARERVRERLRQQRSVESNTNLSSSIASESQLSENN 204

Query: 187 DSLVDTNEVENEC-TISHQGLQNEHDDNTSLSSESN--------------------DSHL 303
            SL D++E EN+  + SH   +NEH DN + SS                       DS +
Sbjct: 205 GSLRDSSESENDFGSWSHD--RNEHGDNNNTSSREQSPDLGDGERERVRHIARGWMDSRI 262

Query: 304 NSCS----------RSQWLGEKECERVRIVRDWVEKTTQQRG 399
           N  S          R +WLG+ E ERVRI+R+W++ T+QQRG
Sbjct: 263 NDHSSNVRQRDDNRRPEWLGDTERERVRIIREWMQMTSQQRG 304


>ref|NP_001190225.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
           gi|332003365|gb|AED90748.1| RING/U-box domain-containing
           protein [Arabidopsis thaliana]
          Length = 825

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 62/162 (38%), Positives = 85/162 (52%), Gaps = 31/162 (19%)
 Frame = +1

Query: 7   DRPSTRASSLLQMWRELEGEHFTNHPQVRNGERPVQGRADGVNTEFGSTYLSGERGHDNV 186
           +RP+T+AS +LQMWRELE EH  N  + R  ER  Q R+   NT   S+  S  +  +N 
Sbjct: 145 ERPNTQASGILQMWRELEDEHVLNRARERVRERLRQQRSVESNTNLSSSIASESQLSENN 204

Query: 187 DSLVDTNEVENEC-TISHQGLQNEHDDNTSLSSESN--------------------DSHL 303
            SL D++E EN+  + SH   +NEH DN + SS                       DS +
Sbjct: 205 GSLRDSSESENDFGSWSHD--RNEHGDNNNTSSREQSPDLGDGERERVRHIARGWMDSRI 262

Query: 304 NSCS----------RSQWLGEKECERVRIVRDWVEKTTQQRG 399
           N  S          R +WLG+ E ERVRI+R+W++ T+QQRG
Sbjct: 263 NDHSSNVRQRDDNRRPEWLGDTERERVRIIREWMQMTSQQRG 304


>emb|CAB85552.1| putative protein [Arabidopsis thaliana]
          Length = 831

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 62/162 (38%), Positives = 85/162 (52%), Gaps = 31/162 (19%)
 Frame = +1

Query: 7   DRPSTRASSLLQMWRELEGEHFTNHPQVRNGERPVQGRADGVNTEFGSTYLSGERGHDNV 186
           +RP+T+AS +LQMWRELE EH  N  + R  ER  Q R+   NT   S+  S  +  +N 
Sbjct: 145 ERPNTQASGILQMWRELEDEHVLNRARERVRERLRQQRSVESNTNLSSSIASESQLSENN 204

Query: 187 DSLVDTNEVENEC-TISHQGLQNEHDDNTSLSSESN--------------------DSHL 303
            SL D++E EN+  + SH   +NEH DN + SS                       DS +
Sbjct: 205 GSLRDSSESENDFGSWSHD--RNEHGDNNNTSSREQSPDLGDGERERVRHIARGWMDSRI 262

Query: 304 NSCS----------RSQWLGEKECERVRIVRDWVEKTTQQRG 399
           N  S          R +WLG+ E ERVRI+R+W++ T+QQRG
Sbjct: 263 NDHSSNVRQRDDNRRPEWLGDTERERVRIIREWMQMTSQQRG 304


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