BLASTX nr result

ID: Panax21_contig00038138 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00038138
         (392 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAF02555.1| hypothetical protein [Nicotiana benthamiana]          105   7e-28
ref|XP_003554227.1| PREDICTED: disease resistance response prote...    94   2e-25
gb|ABK93789.1| unknown [Populus trichocarpa]                           87   9e-24
ref|XP_002323339.1| predicted protein [Populus trichocarpa] gi|2...    87   9e-24
ref|XP_002323336.1| predicted protein [Populus trichocarpa] gi|2...    91   1e-23

>dbj|BAF02555.1| hypothetical protein [Nicotiana benthamiana]
          Length = 194

 Score =  105 bits (262), Expect(2) = 7e-28
 Identities = 48/73 (65%), Positives = 62/73 (84%)
 Frame = -1

Query: 221 DPLTVGPELNSSTVGRAQGLYGFSSMEESCLVMSMNLLFTNGKYNGSTLSVHGRNPLSNQ 42
           D LT+GPE+NS+T+GRAQG+ G +S++E  L+MS+N +FTNGKYNG TLS+ GRN + N+
Sbjct: 90  DRLTIGPEINSTTIGRAQGIVGAASLDEFSLLMSLNFVFTNGKYNGGTLSLLGRNTVLNE 149

Query: 41  YREMAIVGGSGVF 3
           YREM IVGGSGVF
Sbjct: 150 YREMPIVGGSGVF 162



 Score = 43.5 bits (101), Expect(2) = 7e-28
 Identities = 21/56 (37%), Positives = 31/56 (55%)
 Frame = -3

Query: 390 KSPEGIEXXXXXXXXXXXXXXXLHFFLHDTVSGKNPSALKVARSNITLTSATLFGL 223
           + P+ +E               LHF+ HD VSGKNP+A+ +A++N T  S + FGL
Sbjct: 29  QEPKAVEKWFEKLSHAKPKITKLHFYFHDIVSGKNPTAIPIAQANSTSHSPSSFGL 84


>ref|XP_003554227.1| PREDICTED: disease resistance response protein 206-like [Glycine
           max]
          Length = 183

 Score = 93.6 bits (231), Expect(2) = 2e-25
 Identities = 47/75 (62%), Positives = 55/75 (73%)
 Frame = -1

Query: 227 ACDPLTVGPELNSSTVGRAQGLYGFSSMEESCLVMSMNLLFTNGKYNGSTLSVHGRNPLS 48
           A DPLTVGPE  S  VG+AQG+YGF+S E+  L+M MN  FT GKYNGSTLS+ G N + 
Sbjct: 77  ADDPLTVGPEPGSKLVGKAQGIYGFASQEDMGLLMIMNFAFTEGKYNGSTLSLLGWNAVL 136

Query: 47  NQYREMAIVGGSGVF 3
           +  REM IVGGSG F
Sbjct: 137 STVREMPIVGGSGAF 151



 Score = 47.0 bits (110), Expect(2) = 2e-25
 Identities = 20/33 (60%), Positives = 28/33 (84%)
 Frame = -3

Query: 321 HFFLHDTVSGKNPSALKVARSNITLTSATLFGL 223
           HFF HD VSG  P+A++VA++++T TS+TLFGL
Sbjct: 41  HFFFHDIVSGPKPTAVRVAQAHMTNTSSTLFGL 73


>gb|ABK93789.1| unknown [Populus trichocarpa]
          Length = 194

 Score = 87.4 bits (215), Expect(2) = 9e-24
 Identities = 43/73 (58%), Positives = 54/73 (73%)
 Frame = -1

Query: 221 DPLTVGPELNSSTVGRAQGLYGFSSMEESCLVMSMNLLFTNGKYNGSTLSVHGRNPLSNQ 42
           DPLT+ PEL+S  VGRAQG Y  +S  +  L+M+MN +F  GK+NGSTLSV GRN + + 
Sbjct: 90  DPLTMTPELSSKLVGRAQGFYASASQNDVGLLMTMNFVFMEGKFNGSTLSVLGRNSVFST 149

Query: 41  YREMAIVGGSGVF 3
            REM IVGGSG+F
Sbjct: 150 VREMPIVGGSGLF 162



 Score = 47.8 bits (112), Expect(2) = 9e-24
 Identities = 19/33 (57%), Positives = 29/33 (87%)
 Frame = -3

Query: 321 HFFLHDTVSGKNPSALKVARSNITLTSATLFGL 223
           HF+ HD VSGKNP+A+++AR+++T TS+T FG+
Sbjct: 52  HFYFHDIVSGKNPTAVRIARADMTNTSSTGFGM 84


>ref|XP_002323339.1| predicted protein [Populus trichocarpa] gi|222867969|gb|EEF05100.1|
           predicted protein [Populus trichocarpa]
          Length = 178

 Score = 87.4 bits (215), Expect(2) = 9e-24
 Identities = 43/73 (58%), Positives = 54/73 (73%)
 Frame = -1

Query: 221 DPLTVGPELNSSTVGRAQGLYGFSSMEESCLVMSMNLLFTNGKYNGSTLSVHGRNPLSNQ 42
           DPLT+ PEL+S  VGRAQG Y  +S  +  L+M+MN +F  GK+NGSTLSV GRN + + 
Sbjct: 74  DPLTMTPELSSKLVGRAQGFYASASQNDVGLLMTMNFVFMEGKFNGSTLSVLGRNSVFST 133

Query: 41  YREMAIVGGSGVF 3
            REM IVGGSG+F
Sbjct: 134 VREMPIVGGSGLF 146



 Score = 47.8 bits (112), Expect(2) = 9e-24
 Identities = 19/33 (57%), Positives = 29/33 (87%)
 Frame = -3

Query: 321 HFFLHDTVSGKNPSALKVARSNITLTSATLFGL 223
           HF+ HD VSGKNP+A+++AR+++T TS+T FG+
Sbjct: 36  HFYFHDIVSGKNPTAVRIARADMTNTSSTGFGM 68


>ref|XP_002323336.1| predicted protein [Populus trichocarpa] gi|222867966|gb|EEF05097.1|
           predicted protein [Populus trichocarpa]
          Length = 193

 Score = 90.9 bits (224), Expect(2) = 1e-23
 Identities = 44/73 (60%), Positives = 54/73 (73%)
 Frame = -1

Query: 221 DPLTVGPELNSSTVGRAQGLYGFSSMEESCLVMSMNLLFTNGKYNGSTLSVHGRNPLSNQ 42
           DPLTV PE++S  VGRAQG+Y  +S  E   +M +NL FT GKYNGSTLS+ GRN + + 
Sbjct: 89  DPLTVKPEVSSKQVGRAQGIYASASQSEVSFLMVLNLFFTEGKYNGSTLSILGRNSIFSG 148

Query: 41  YREMAIVGGSGVF 3
            REM IVGGSG+F
Sbjct: 149 IREMPIVGGSGLF 161



 Score = 43.9 bits (102), Expect(2) = 1e-23
 Identities = 19/33 (57%), Positives = 26/33 (78%)
 Frame = -3

Query: 321 HFFLHDTVSGKNPSALKVARSNITLTSATLFGL 223
           HF+ HDT+SGKNP+A+ VA++  T  S+T FGL
Sbjct: 51  HFYFHDTLSGKNPTAVPVAQAATTNKSSTSFGL 83


Top