BLASTX nr result

ID: Panax21_contig00038136 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00038136
         (410 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAR84411.2| arginine decarboxylase [Daucus carota]                 249   2e-64
emb|CAA65585.1| arginine decarboxylase [Vitis vinifera]               222   3e-56
ref|XP_002269030.1| PREDICTED: arginine decarboxylase [Vitis vin...   222   3e-56
emb|CAN65288.1| hypothetical protein VITISV_008959 [Vitis vinifera]   222   3e-56
gb|AFN26936.1| arginine decarboxylase [Camellia sinensis]             221   5e-56

>gb|AAR84411.2| arginine decarboxylase [Daucus carota]
          Length = 570

 Score =  249 bits (636), Expect = 2e-64
 Identities = 120/135 (88%), Positives = 125/135 (92%)
 Frame = -3

Query: 405 VKGILSGLTCDSDGKIDKFIGGEASLPLHELEGSGRGSYYLGMFLGGAYEEALGGVHNLF 226
           VKGILS LTCDSDGKI+KFIGGE SLPLHELEGSG GSYYLGMFLGGAYEEALG +HNLF
Sbjct: 387 VKGILSDLTCDSDGKIEKFIGGEESLPLHELEGSGEGSYYLGMFLGGAYEEALGSIHNLF 446

Query: 225 GGPSMVRVSQSDGPHSFAVTRAVPGPSCGDVLRVMQHEPEIMFETLKHRAEECVIDESSH 46
           GGPS+VRVSQSDGPHSFAVTRAVPGPSC DVLRVMQHEPE+MFE LKHRAEE V+DE  H
Sbjct: 447 GGPSVVRVSQSDGPHSFAVTRAVPGPSCADVLRVMQHEPEMMFEELKHRAEEYVLDEGGH 506

Query: 45  GLDHDAIANGLAHSF 1
           GLDHDAIANGLA SF
Sbjct: 507 GLDHDAIANGLACSF 521


>emb|CAA65585.1| arginine decarboxylase [Vitis vinifera]
          Length = 630

 Score =  222 bits (565), Expect = 3e-56
 Identities = 110/141 (78%), Positives = 123/141 (87%), Gaps = 5/141 (3%)
 Frame = -3

Query: 408 GVKGILSGLTCDSDGKIDKFIGGEASLPLHELEGS-----GRGSYYLGMFLGGAYEEALG 244
           G +GILS LTCDSDGKIDKFIGGE+SLPLHELEGS     G G YYLGMFLGGAYEEALG
Sbjct: 447 GARGILSDLTCDSDGKIDKFIGGESSLPLHELEGSDVVFGGSGKYYLGMFLGGAYEEALG 506

Query: 243 GVHNLFGGPSMVRVSQSDGPHSFAVTRAVPGPSCGDVLRVMQHEPEIMFETLKHRAEECV 64
           G+HNLFGGPS+VRV QSDGPHSFAVTRA+PGPSCGDVLRVMQHEPE+MFETLKHRAEEC 
Sbjct: 507 GLHNLFGGPSVVRVLQSDGPHSFAVTRAMPGPSCGDVLRVMQHEPELMFETLKHRAEECG 566

Query: 63  IDESSHGLDHDAIANGLAHSF 1
            ++   G+ + ++A+GLA SF
Sbjct: 567 HED---GMTNGSLASGLALSF 584


>ref|XP_002269030.1| PREDICTED: arginine decarboxylase [Vitis vinifera]
          Length = 720

 Score =  222 bits (565), Expect = 3e-56
 Identities = 110/141 (78%), Positives = 123/141 (87%), Gaps = 5/141 (3%)
 Frame = -3

Query: 408 GVKGILSGLTCDSDGKIDKFIGGEASLPLHELEGS-----GRGSYYLGMFLGGAYEEALG 244
           G +GILS LTCDSDGKIDKFIGGE+SLPLHELEGS     G G YYLGMFLGGAYEEALG
Sbjct: 537 GARGILSDLTCDSDGKIDKFIGGESSLPLHELEGSDVVFGGSGKYYLGMFLGGAYEEALG 596

Query: 243 GVHNLFGGPSMVRVSQSDGPHSFAVTRAVPGPSCGDVLRVMQHEPEIMFETLKHRAEECV 64
           G+HNLFGGPS+VRV QSDGPHSFAVTRA+PGPSCGDVLRVMQHEPE+MFETLKHRAEEC 
Sbjct: 597 GLHNLFGGPSVVRVLQSDGPHSFAVTRAMPGPSCGDVLRVMQHEPELMFETLKHRAEECG 656

Query: 63  IDESSHGLDHDAIANGLAHSF 1
            ++   G+ + ++A+GLA SF
Sbjct: 657 HED---GMTNGSLASGLALSF 674


>emb|CAN65288.1| hypothetical protein VITISV_008959 [Vitis vinifera]
          Length = 613

 Score =  222 bits (565), Expect = 3e-56
 Identities = 110/141 (78%), Positives = 123/141 (87%), Gaps = 5/141 (3%)
 Frame = -3

Query: 408 GVKGILSGLTCDSDGKIDKFIGGEASLPLHELEGS-----GRGSYYLGMFLGGAYEEALG 244
           G +GILS LTCDSDGKIDKFIGGE+SLPLHELEGS     G G YYLGMFLGGAYEEALG
Sbjct: 430 GARGILSDLTCDSDGKIDKFIGGESSLPLHELEGSDVVFGGSGKYYLGMFLGGAYEEALG 489

Query: 243 GVHNLFGGPSMVRVSQSDGPHSFAVTRAVPGPSCGDVLRVMQHEPEIMFETLKHRAEECV 64
           G+HNLFGGPS+VRV QSDGPHSFAVTRA+PGPSCGDVLRVMQHEPE+MFETLKHRAEEC 
Sbjct: 490 GLHNLFGGPSVVRVLQSDGPHSFAVTRAMPGPSCGDVLRVMQHEPELMFETLKHRAEECG 549

Query: 63  IDESSHGLDHDAIANGLAHSF 1
            ++   G+ + ++A+GLA SF
Sbjct: 550 HED---GMTNGSLASGLALSF 567


>gb|AFN26936.1| arginine decarboxylase [Camellia sinensis]
          Length = 720

 Score =  221 bits (563), Expect = 5e-56
 Identities = 109/138 (78%), Positives = 124/138 (89%), Gaps = 2/138 (1%)
 Frame = -3

Query: 408 GVKGILSGLTCDSDGKIDKFIGGEASLPLHELEGS--GRGSYYLGMFLGGAYEEALGGVH 235
           GV+GILS LTCDSDGKI+KFIGGE+SLPLHELEG   G G+YYLGMFLGGAYEEALGGVH
Sbjct: 534 GVRGILSDLTCDSDGKINKFIGGESSLPLHELEGEDGGGGTYYLGMFLGGAYEEALGGVH 593

Query: 234 NLFGGPSMVRVSQSDGPHSFAVTRAVPGPSCGDVLRVMQHEPEIMFETLKHRAEECVIDE 55
           NLFGGPS+VRVSQ+DGPHSFAVTRA+PGPSCGDVLRVMQHEPE+MFE LKHRAEE V D+
Sbjct: 594 NLFGGPSVVRVSQNDGPHSFAVTRAMPGPSCGDVLRVMQHEPELMFEVLKHRAEEFVHDD 653

Query: 54  SSHGLDHDAIANGLAHSF 1
             +G+   ++A+G+A SF
Sbjct: 654 -GNGMATASLASGIARSF 670


Top