BLASTX nr result

ID: Panax21_contig00038113 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00038113
         (420 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN63091.1| hypothetical protein VITISV_032018 [Vitis vinifera]    72   4e-11
ref|XP_002308560.1| predicted protein [Populus trichocarpa] gi|2...    57   1e-06

>emb|CAN63091.1| hypothetical protein VITISV_032018 [Vitis vinifera]
          Length = 580

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 53/128 (41%), Positives = 59/128 (46%), Gaps = 36/128 (28%)
 Frame = +1

Query: 16  ETSSSPPQASFPATMSSSSFVVGGDNERCGPAFSDSASTVMAGV---------------- 147
           E SS P +   P       FVVG   E CG +FSDSASTVMAGV                
Sbjct: 457 EISSPPARRPSP---DXPGFVVGTSRESCGASFSDSASTVMAGVEMAGGGGGSGVVGTSL 513

Query: 148 -------------GMGSTKVLAGEEV---SFPASGGERKMDGCD----DDEWLERVLNMD 267
                        G GS   +A EE     F A GGER MDGCD    DDEWL RVL+  
Sbjct: 514 VGLAGRRAGRAAAGKGSAMEVAKEECYVPEFVAVGGER-MDGCDGLEFDDEWLSRVLSWG 572

Query: 268 PQEFEDWT 291
           P + +DWT
Sbjct: 573 PLDLDDWT 580


>ref|XP_002308560.1| predicted protein [Populus trichocarpa] gi|222854536|gb|EEE92083.1|
           predicted protein [Populus trichocarpa]
          Length = 160

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 44/117 (37%), Positives = 58/117 (49%), Gaps = 23/117 (19%)
 Frame = +1

Query: 10  EVETSSSPPQASFPATMSSSSFVVGGDNERCGPAFSDSASTVMAGVG-MGSTKVLAGEEV 186
           E+  + S P  + P+ +    FV  G +E CG + SDS+STVMAGV  +G    LAG  +
Sbjct: 48  EITCTKSTPLGNVPSPV----FVDNGKSESCGASVSDSSSTVMAGVEFVGVAGKLAGGYL 103

Query: 187 SFPAS--GGERK--------------MDGCD-----DDEWLERVL-NMDPQEFEDWT 291
             P +    ER+              MDGCD     DD+WL+RVL    P E E WT
Sbjct: 104 GLPGNRLREERRGFALGEGFLAERMMMDGCDGVELGDDQWLDRVLMGWGPVEVEGWT 160


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