BLASTX nr result

ID: Panax21_contig00038043 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00038043
         (368 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002441937.1| hypothetical protein SORBIDRAFT_08g005170 [S...   120   2e-32
ref|XP_002464800.1| hypothetical protein SORBIDRAFT_01g026890 [S...    99   1e-24
ref|XP_004212064.1| PREDICTED: uncharacterized protein LOC100200...   110   1e-22
ref|XP_003628008.1| HAT family dimerization domain containing pr...   105   2e-22
ref|XP_003628024.1| hypothetical protein MTR_8g041550 [Medicago ...   108   3e-22

>ref|XP_002441937.1| hypothetical protein SORBIDRAFT_08g005170 [Sorghum bicolor]
           gi|241942630|gb|EES15775.1| hypothetical protein
           SORBIDRAFT_08g005170 [Sorghum bicolor]
          Length = 535

 Score =  120 bits (301), Expect(2) = 2e-32
 Identities = 58/98 (59%), Positives = 71/98 (72%), Gaps = 6/98 (6%)
 Frame = +3

Query: 9   RGRHLLNFLVNSPEGTYFMGSVDASSQSQDATMLANLLDSKIEEITPSM------DNASN 170
           RG HL+NFL+NSPEG YF+ S+DASS+  DA ML  LL+ K+EEI          DN +N
Sbjct: 123 RGHHLINFLINSPEGIYFLESIDASSEVHDAYMLVGLLEKKVEEIGKDKVVQVITDNGAN 182

Query: 171 YKAAGHILMERRPTLFWTPCAAHCLDLMLEDIGKLKQF 284
           +KAAG ILM+   T+FW+PC AHCLDLMLEDIG L +F
Sbjct: 183 FKAAGKILMDIIATIFWSPCVAHCLDLMLEDIGNLLEF 220



 Score = 43.9 bits (102), Expect(2) = 2e-32
 Identities = 19/28 (67%), Positives = 22/28 (78%)
 Frame = +1

Query: 283 SNARRITTFIYRHGRLLDAMRNKTNGRD 366
           + AR +TTFIYRHGR+L AMR KT G D
Sbjct: 225 TRARCVTTFIYRHGRILSAMREKTGGAD 252


>ref|XP_002464800.1| hypothetical protein SORBIDRAFT_01g026890 [Sorghum bicolor]
           gi|241918654|gb|EER91798.1| hypothetical protein
           SORBIDRAFT_01g026890 [Sorghum bicolor]
          Length = 530

 Score = 99.0 bits (245), Expect(2) = 1e-24
 Identities = 50/98 (51%), Positives = 66/98 (67%), Gaps = 6/98 (6%)
 Frame = +3

Query: 9   RGRHLLNFLVNSPEGTYFMGSVDASSQSQDATMLANLLDSKIEEITPSM------DNASN 170
           R  HLL F+V S EG +F+GS DAS  +  A +LA L++ +I+E+           N+ N
Sbjct: 101 RRLHLLTFMVGSVEGVFFLGSADASYATDHADLLAELIEERIDEVGRDKVLQVVTGNSHN 160

Query: 171 YKAAGHILMERRPTLFWTPCAAHCLDLMLEDIGKLKQF 284
            KAA  ILM+R PTLFWTPCA  CLDLML+DIG+L++F
Sbjct: 161 LKAACKILMDRIPTLFWTPCAFQCLDLMLKDIGRLQEF 198



 Score = 38.9 bits (89), Expect(2) = 1e-24
 Identities = 15/26 (57%), Positives = 22/26 (84%)
 Frame = +1

Query: 289 ARRITTFIYRHGRLLDAMRNKTNGRD 366
           A+R+TTFIYRHG+ L+A+  K +G+D
Sbjct: 205 AKRVTTFIYRHGKFLNALCKKMDGKD 230


>ref|XP_004212064.1| PREDICTED: uncharacterized protein LOC100200506 [Hydra
           magnipapillata]
          Length = 263

 Score =  110 bits (275), Expect = 1e-22
 Identities = 53/94 (56%), Positives = 68/94 (72%), Gaps = 6/94 (6%)
 Frame = +3

Query: 12  GRHLLNFLVNSPEGTYFMGSVDASSQSQDATMLANLLDSKIEEITPS------MDNASNY 173
           GR L+NFLVN+P+GTYF+ S+DAS Q +DA +L  LLD  +EE+          DN S Y
Sbjct: 59  GRTLINFLVNNPKGTYFLKSIDASDQVKDAKLLFKLLDEVVEEVGEKNIIQVITDNVSAY 118

Query: 174 KAAGHILMERRPTLFWTPCAAHCLDLMLEDIGKL 275
           K AG +LME++  L+WTPCAAHC++LMLEDI KL
Sbjct: 119 KTAGRMLMEKKKNLYWTPCAAHCIELMLEDIFKL 152


>ref|XP_003628008.1| HAT family dimerization domain containing protein [Medicago
           truncatula] gi|355522030|gb|AET02484.1| HAT family
           dimerization domain containing protein [Medicago
           truncatula]
          Length = 648

 Score =  105 bits (262), Expect(2) = 2e-22
 Identities = 51/96 (53%), Positives = 68/96 (70%), Gaps = 6/96 (6%)
 Frame = +3

Query: 3   DKRGRHLLNFLVNSPEGTYFMGSVDASSQSQDATMLANLLDSKIEEITPS------MDNA 164
           D+R R +LNFLVNSP GT F+ SVDAS+  + +  +  ++D+ +EE+          DNA
Sbjct: 164 DRRRRTILNFLVNSPRGTVFLKSVDASNICKTSEKIFEMIDAVVEEVGEDNVVQVVTDNA 223

Query: 165 SNYKAAGHILMERRPTLFWTPCAAHCLDLMLEDIGK 272
           +NYKAAG +LM +R  L+WTPCAAHCLDLMLED+ K
Sbjct: 224 ANYKAAGEMLMRKRKKLYWTPCAAHCLDLMLEDLEK 259



 Score = 25.4 bits (54), Expect(2) = 2e-22
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +1

Query: 292 RRITTFIYRHGRLLDAMRNKTNGRD 366
           ++ITTFIY    L+  + + T  RD
Sbjct: 272 KKITTFIYARTSLISILHSHTKNRD 296


>ref|XP_003628024.1| hypothetical protein MTR_8g041550 [Medicago truncatula]
           gi|355522046|gb|AET02500.1| hypothetical protein
           MTR_8g041550 [Medicago truncatula]
          Length = 757

 Score =  108 bits (269), Expect(2) = 3e-22
 Identities = 51/96 (53%), Positives = 69/96 (71%), Gaps = 6/96 (6%)
 Frame = +3

Query: 3   DKRGRHLLNFLVNSPEGTYFMGSVDASSQSQDATMLANLLDSKIEEITPS------MDNA 164
           D+R R +LNFLV+SP+GT+F+ S+D S  ++ A  +  ++D  +EEI          DNA
Sbjct: 240 DRRRRTILNFLVHSPKGTFFLKSIDPSDITKTADKIFKMIDDVVEEIGEENVVQVVTDNA 299

Query: 165 SNYKAAGHILMERRPTLFWTPCAAHCLDLMLEDIGK 272
           +NYKAAG +LME+RP L+WTPCAAHC+DLMLED  K
Sbjct: 300 ANYKAAGELLMEKRPHLYWTPCAAHCIDLMLEDFEK 335



 Score = 21.9 bits (45), Expect(2) = 3e-22
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +1

Query: 283 SNARRITTFIYRHGRLLDAMRNKTNGRD 366
           S  + ITT+IY    L+  +   TN  D
Sbjct: 345 SKGKTITTYIYGRTSLISLLHKFTNDVD 372


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