BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00038028
         (529 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB08270.1| non-LTR retroelement reverse transcriptase-like ...   144   1e-32
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...   140   1e-31
gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcrip...   140   2e-31
gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana]             137   8e-31
emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga...   134   8e-30

>dbj|BAB08270.1| non-LTR retroelement reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 489

 Score =  144 bits (362), Expect = 1e-32
 Identities = 73/171 (42%), Positives = 108/171 (63%)
 Frame = -1

Query: 514 DFPPSFIGWVKACVSSAMFSIKINGTLAGFFASSRGLRQGDPLSPFLFVLVMEMLSLKLN 335
           +FPP FI W+  CV++A F +++NG LAG+F S+RGLRQG  LSP+LFV+ M +LS  L+
Sbjct: 2   EFPPVFIHWIMLCVTTASFLVQVNGELAGYFNSTRGLRQGCSLSPYLFVVSMNVLSKLLD 61

Query: 334 KETSEFEFKYHWKTKECRLTHLLFAYDILIFSHACVQXXXXXXXXXXXXSLYSGLIPNTH 155
           K T +  F YH + K+  LTHL FA D+++ S   V+            +  SGL  +  
Sbjct: 62  KATGQRRFGYHPRCKQMGLTHLSFADDLMVLSDGKVRSIEGIVEVFETFAKCSGLRISME 121

Query: 154 KSRCYFANLDHATTRDISSLLSFPTGTLPSKFLGVPLLSTKLSHSDCVPLI 2
           KS  YFA L H + +++ +   F  GTLP ++LG+PL++ +LS +D +PLI
Sbjct: 122 KSTVYFAGLSHTSPQEVMAHFPFAVGTLPVRYLGLPLVTKQLSSTDYLPLI 172


>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
            thaliana]
          Length = 1223

 Score =  140 bits (353), Expect = 1e-31
 Identities = 69/170 (40%), Positives = 104/170 (61%)
 Frame = -1

Query: 511  FPPSFIGWVKACVSSAMFSIKINGTLAGFFASSRGLRQGDPLSPFLFVLVMEMLSLKLNK 332
            FP  FI W+  C+++A FS+++NG LAG+F SSRGLRQG  LSP+LFV+ M++LS  L+K
Sbjct: 621  FPREFIHWINICITTASFSVQVNGELAGYFQSSRGLRQGCALSPYLFVICMDVLSKMLDK 680

Query: 331  ETSEFEFKYHWKTKECRLTHLLFAYDILIFSHACVQXXXXXXXXXXXXSLYSGLIPNTHK 152
              +   F YH K K   LTHL FA D+++ S   ++            + +SGL  +  K
Sbjct: 681  AAAARHFGYHPKCKTMGLTHLSFADDLMVLSDGKIRSIERIIKVFDEFAKWSGLRISLEK 740

Query: 151  SRCYFANLDHATTRDISSLLSFPTGTLPSKFLGVPLLSTKLSHSDCVPLI 2
            S  Y A L      +++    F +G LP ++LG+PL++ +LS +DC+PL+
Sbjct: 741  STVYLAGLSATARNEVADRFPFSSGQLPVRYLGLPLITKRLSTTDCLPLL 790


>gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcript_fact.hmm, score:
            72.31) [Arabidopsis thaliana]
          Length = 928

 Score =  140 bits (352), Expect = 2e-31
 Identities = 73/175 (41%), Positives = 107/175 (61%)
 Frame = -1

Query: 526  LLAFDFPPSFIGWVKACVSSAMFSIKINGTLAGFFASSRGLRQGDPLSPFLFVLVMEMLS 347
            L A +FPP F  W+  C+++A FS+++NG LAG F+S+R LRQG  LSP+LFV+ M++LS
Sbjct: 504  LEAMNFPPEFTHWITLCITTASFSVQVNGELAGVFSSARELRQGCSLSPYLFVISMDVLS 563

Query: 346  LKLNKETSEFEFKYHWKTKECRLTHLLFAYDILIFSHACVQXXXXXXXXXXXXSLYSGLI 167
              L+K     +F YH K +   LTHL FA D++I S   V+            + +SGL 
Sbjct: 564  KMLDKAVGARQFGYHPKCRAIGLTHLSFADDLMILSDGKVRSIDGIVKVLYEFAKWSGLK 623

Query: 166  PNTHKSRCYFANLDHATTRDISSLLSFPTGTLPSKFLGVPLLSTKLSHSDCVPLI 2
             +  KS  Y A +  +  ++I    SF  G LP ++LG+PL+S +L+ SDC+PLI
Sbjct: 624  ISMEKSTMYLAGVQASVYQEIVQKFSFDVGKLPVRYLGLPLVSKRLTASDCLPLI 678


>gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana]
          Length = 653

 Score =  137 bits (346), Expect = 8e-31
 Identities = 70/175 (40%), Positives = 105/175 (60%)
 Frame = -1

Query: 526 LLAFDFPPSFIGWVKACVSSAMFSIKINGTLAGFFASSRGLRQGDPLSPFLFVLVMEMLS 347
           LL+ DFP  F+ W+  C+S+A FS+++NG L GFF S RGLRQG  LSP+LFV+ M++LS
Sbjct: 143 LLSMDFPMEFVHWIMLCISTASFSVQVNGELVGFFQSKRGLRQGCSLSPYLFVMSMDVLS 202

Query: 346 LKLNKETSEFEFKYHWKTKECRLTHLLFAYDILIFSHACVQXXXXXXXXXXXXSLYSGLI 167
             L++  S  +F YH + KE  LTHL FA D+++ S   V+            + +SGL 
Sbjct: 203 KLLDQAASAKKFGYHSRCKELSLTHLSFADDLMVLSDGKVRSIDGIVEVFDIFAKFSGLK 262

Query: 166 PNTHKSRCYFANLDHATTRDISSLLSFPTGTLPSKFLGVPLLSTKLSHSDCVPLI 2
            +  KS  Y A +      +I +   F  G LP ++LG+PL++ +L+ +D  PL+
Sbjct: 263 ISMEKSTIYLAGVTEDVYHEIQNRYQFDVGQLPVRYLGLPLVTKRLTATDYSPLL 317


>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1110

 Score =  134 bits (337), Expect = 8e-30
 Identities = 69/175 (39%), Positives = 98/175 (56%)
 Frame = -1

Query: 526  LLAFDFPPSFIGWVKACVSSAMFSIKINGTLAGFFASSRGLRQGDPLSPFLFVLVMEMLS 347
            L  F FP  F+GW+  CVS+  +S+ +NG     F + +GLRQGDP+SPFLF L ME LS
Sbjct: 601  LYEFGFPSRFVGWIMECVSTVSYSVLVNGIPTQPFQARKGLRQGDPMSPFLFALCMEYLS 660

Query: 346  LKLNKETSEFEFKYHWKTKECRLTHLLFAYDILIFSHACVQXXXXXXXXXXXXSLYSGLI 167
              L +     +F +H K +   +THL+FA D+L+F  A               S  SGL 
Sbjct: 661  RCLEELKGSPDFNFHPKCERLNITHLMFADDLLMFCRADKSSLDHMNVAFQKFSHASGLA 720

Query: 166  PNTHKSRCYFANLDHATTRDISSLLSFPTGTLPSKFLGVPLLSTKLSHSDCVPLI 2
             +  KS  YF  +D  T R+++  +    G LP ++LGVPL S KL+++ C PL+
Sbjct: 721  ASHEKSNIYFCGVDDETARELADYVHMQLGELPFRYLGVPLTSKKLTYAQCKPLV 775