BLASTX nr result

ID: Panax21_contig00037930 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00037930
         (570 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFP73234.1| CST complex subunit CTC1-like protein, partial [C...   111   7e-23
ref|XP_004160622.1| PREDICTED: CST complex subunit CTC1-like [Cu...   111   9e-23
ref|XP_004141370.1| PREDICTED: CST complex subunit CTC1-like [Cu...   111   9e-23
ref|XP_002510276.1| conserved hypothetical protein [Ricinus comm...   100   1e-19
emb|CAN78397.1| hypothetical protein VITISV_011909 [Vitis vinifera]    93   3e-17

>gb|AFP73234.1| CST complex subunit CTC1-like protein, partial [Carica papaya]
          Length = 409

 Score =  111 bits (278), Expect = 7e-23
 Identities = 63/153 (41%), Positives = 82/153 (53%), Gaps = 4/153 (2%)
 Frame = +2

Query: 122 TMEEHTVEILTISKLIQRCRPLTGASSLSFTXXXXXXXXXXXXXXDQNQNTP----SDPT 289
           T++    + LTI +LIQ  R LT  SSL F+               + Q+ P    + PT
Sbjct: 6   TVQNGKPKFLTILQLIQDGRALTATSSLHFSLGPHIHPSSYKSVPRERQSCPGPSNAGPT 65

Query: 290 SPKTLKPLNQPTILIGTLNLXXXXXXXXXXXXXXXXXAFLCPKTSCFSFSDGSASICCDI 469
           +P+ L PLNQP +LIG L L                    CP  SC  FSD S++ICCDI
Sbjct: 66  TPQILAPLNQPAMLIGILTLPTL--------------TLKCPNRSCLQFSDNSSTICCDI 111

Query: 470 LDLHPRILGKKIRILAWNFIPLKSGGGFLEIIK 568
           +D   R++GK+IR+LAWNFIP    GGFLEII+
Sbjct: 112 IDFDARVIGKRIRVLAWNFIPSNHHGGFLEIIE 144


>ref|XP_004160622.1| PREDICTED: CST complex subunit CTC1-like [Cucumis sativus]
          Length = 1362

 Score =  111 bits (277), Expect = 9e-23
 Identities = 64/148 (43%), Positives = 82/148 (55%), Gaps = 5/148 (3%)
 Frame = +2

Query: 140 VEILTISKLIQRCRPLTGA----SSLSFTXXXXXXXXXXXXXXDQNQNTPSDPT-SPKTL 304
           V++LTIS LIQ   PLTG      S SF                 N ++P++   +P+ L
Sbjct: 4   VKVLTISDLIQCRLPLTGTYNFHQSSSFNSLPTELLQSNPRPVPSNSSSPAESNPNPEVL 63

Query: 305 KPLNQPTILIGTLNLXXXXXXXXXXXXXXXXXAFLCPKTSCFSFSDGSASICCDILDLHP 484
             L  PTILIGTL L                    CP  +CF F+DGS ++CCDILD+  
Sbjct: 64  TSLKYPTILIGTLTLPFDAPRSSILKPFCS-----CPTNNCFQFTDGSGTVCCDILDIDI 118

Query: 485 RILGKKIRILAWNFIPLKSGGGFLEIIK 568
           R+ GK+IR+L+WNFIPL+S GGFLEIIK
Sbjct: 119 RMFGKEIRVLSWNFIPLRSAGGFLEIIK 146


>ref|XP_004141370.1| PREDICTED: CST complex subunit CTC1-like [Cucumis sativus]
          Length = 1383

 Score =  111 bits (277), Expect = 9e-23
 Identities = 64/148 (43%), Positives = 82/148 (55%), Gaps = 5/148 (3%)
 Frame = +2

Query: 140 VEILTISKLIQRCRPLTGA----SSLSFTXXXXXXXXXXXXXXDQNQNTPSDPT-SPKTL 304
           V++LTIS LIQ   PLTG      S SF                 N ++P++   +P+ L
Sbjct: 4   VKVLTISDLIQCRLPLTGTYNFHQSSSFNSLPTELLQSNPRPVPSNSSSPAESNPNPEVL 63

Query: 305 KPLNQPTILIGTLNLXXXXXXXXXXXXXXXXXAFLCPKTSCFSFSDGSASICCDILDLHP 484
             L  PTILIGTL L                    CP  +CF F+DGS ++CCDILD+  
Sbjct: 64  TSLKYPTILIGTLTLPFDAPRSSILKPFCS-----CPTNNCFQFTDGSGTVCCDILDIDI 118

Query: 485 RILGKKIRILAWNFIPLKSGGGFLEIIK 568
           R+ GK+IR+L+WNFIPL+S GGFLEIIK
Sbjct: 119 RMFGKEIRVLSWNFIPLRSAGGFLEIIK 146


>ref|XP_002510276.1| conserved hypothetical protein [Ricinus communis]
           gi|223550977|gb|EEF52463.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1159

 Score =  100 bits (250), Expect = 1e-19
 Identities = 60/150 (40%), Positives = 80/150 (53%), Gaps = 4/150 (2%)
 Frame = +2

Query: 131 EHTVEILTISKLIQRCRPLTGASSLSFTXXXXXXXXXXXXXXDQ---NQNTPSDPTSPKT 301
           E TV  LTIS+LI+R +PLT  ++L+ +                   +    S+P   K 
Sbjct: 2   EETVNQLTISELIRRGQPLTATATLNSSPSFPIPSSFSKSKTPPPPPDTTINSNPRLSKI 61

Query: 302 LKPLNQPTILIGTLNLXXXXXXXXXXXXXXXXXAFLCPKTSCFSFSDGSASICCDILDLH 481
           L PL  P +L+G+L L                    C   +CF FSDGS++ICCDILD  
Sbjct: 62  LSPLTHPAVLVGSLTLPTE--------------TLKCTNKNCFQFSDGSSTICCDILDFS 107

Query: 482 PRILGKKIRILAWNFIPLK-SGGGFLEIIK 568
             ++GK+I +L+WNFIPLK S GGFLEIIK
Sbjct: 108 VPVIGKRIHVLSWNFIPLKHSPGGFLEIIK 137


>emb|CAN78397.1| hypothetical protein VITISV_011909 [Vitis vinifera]
          Length = 1618

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 59/148 (39%), Positives = 80/148 (54%), Gaps = 6/148 (4%)
 Frame = +2

Query: 143 EILTISKLIQRCRPLTGASSLSFTXXXXXXXXXXXXXXD-QNQNTP-SDP----TSPKTL 304
           ++++IS+L+Q  RPLT  S+L                    N N P S P    T+P+ L
Sbjct: 165 KMVSISELVQGRRPLTATSTLHSPPSTSSHTPPISSSSSFPNSNLPPSTPAGGVTAPRIL 224

Query: 305 KPLNQPTILIGTLNLXXXXXXXXXXXXXXXXXAFLCPKTSCFSFSDGSASICCDILDLHP 484
            PLN P+ LIGTL L                    C  ++CF FSD S+++CCD+L L  
Sbjct: 225 TPLNHPSXLIGTLXLPSYLHSTPALPC--------CSHSTCFVFSDASSTVCCDVLHLDL 276

Query: 485 RILGKKIRILAWNFIPLKSGGGFLEIIK 568
           RI+G +IR+L+WNFIP K  GGFLEII+
Sbjct: 277 RIIGNRIRVLSWNFIPSKC-GGFLEIIR 303


Top