BLASTX nr result
ID: Panax21_contig00037880
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00037880
(446 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002314675.1| predicted protein [Populus trichocarpa] gi|2... 226 1e-57
ref|XP_003610748.1| Pentatricopeptide repeat-containing protein ... 216 2e-54
ref|XP_003538647.1| PREDICTED: pentatricopeptide repeat-containi... 214 6e-54
ref|XP_002279134.1| PREDICTED: pentatricopeptide repeat-containi... 209 2e-52
ref|NP_188908.2| uncharacterized protein [Arabidopsis thaliana] ... 182 2e-44
>ref|XP_002314675.1| predicted protein [Populus trichocarpa] gi|222863715|gb|EEF00846.1|
predicted protein [Populus trichocarpa]
Length = 845
Score = 226 bits (577), Expect = 1e-57
Identities = 107/148 (72%), Positives = 127/148 (85%)
Frame = +1
Query: 1 VSNALIDIYMKCGKKELGCVIFDRMLNKTIVSWNSLIAGLIRNDDVESARRIFNEMPDAD 180
V NA+I++YMKCGK+E+ C +FDRMLNKT VSWNSLIAG +RN D+ESA +IF+ MPD+D
Sbjct: 378 VCNAIINMYMKCGKQEMACRVFDRMLNKTRVSWNSLIAGFVRNGDMESAWKIFSAMPDSD 437
Query: 181 LVSWNTILGALVQKSLFEDAIEHFRVMQSVGIEADKVTMVSVASACGYLGGLDLAKWTYN 360
LVSWNT++GALVQ+S+F++AIE FRVMQS GI ADKVTMV VASACGYLG LDLAKW +
Sbjct: 438 LVSWNTMIGALVQESMFKEAIELFRVMQSEGITADKVTMVGVASACGYLGALDLAKWIHG 497
Query: 361 YINNNEIHCDLQLSTALVDMFARCGDPQ 444
YI +IH D+ L TALVDMFARCGDPQ
Sbjct: 498 YIKKKDIHFDMHLGTALVDMFARCGDPQ 525
Score = 75.1 bits (183), Expect = 6e-12
Identities = 38/112 (33%), Positives = 63/112 (56%)
Frame = +1
Query: 100 NSLIAGLIRNDDVESARRIFNEMPDADLVSWNTILGALVQKSLFEDAIEHFRVMQSVGIE 279
NSLI +++ RR+F++M + ++VSW +++G ++ +++A+ F M VGI
Sbjct: 178 NSLIHFYGECGEIDCMRRVFDKMSERNVVSWTSLIGGYAKRGCYKEAVSLFFEMVEVGIR 237
Query: 280 ADKVTMVSVASACGYLGGLDLAKWTYNYINNNEIHCDLQLSTALVDMFARCG 435
+ VTMV V SAC L L L + I E+ + + ALVDM+ +CG
Sbjct: 238 PNSVTMVGVISACAKLQDLQLGEQVCTCIGELELEVNALMVNALVDMYMKCG 289
Score = 70.9 bits (172), Expect = 1e-10
Identities = 40/143 (27%), Positives = 66/143 (46%)
Frame = +1
Query: 7 NALIDIYMKCGKKELGCVIFDRMLNKTIVSWNSLIAGLIRNDDVESARRIFNEMPDADLV 186
NAL+D+YMKCG ++ AR+IF+E D +LV
Sbjct: 279 NALVDMYMKCGA-------------------------------IDKARKIFDECVDKNLV 307
Query: 187 SWNTILGALVQKSLFEDAIEHFRVMQSVGIEADKVTMVSVASACGYLGGLDLAKWTYNYI 366
+NTI+ V++ L + + M G D++TM+S SAC L + KW + Y+
Sbjct: 308 LYNTIMSNYVRQGLAREVLAVLGEMLKHGPRPDRITMLSAVSACSELDDVSCGKWCHGYV 367
Query: 367 NNNEIHCDLQLSTALVDMFARCG 435
N + + A+++M+ +CG
Sbjct: 368 LRNGLEGWDNVCNAIINMYMKCG 390
>ref|XP_003610748.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512083|gb|AES93706.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 828
Score = 216 bits (550), Expect = 2e-54
Identities = 97/147 (65%), Positives = 124/147 (84%)
Frame = +1
Query: 1 VSNALIDIYMKCGKKELGCVIFDRMLNKTIVSWNSLIAGLIRNDDVESARRIFNEMPDAD 180
+SNA+ID+YMKCGK+E C +FD M NKT+V+WNSLIAGL+R+ ++E A RIF EMP+++
Sbjct: 361 ISNAIIDMYMKCGKREAACKVFDSMSNKTVVTWNSLIAGLVRDGELELALRIFGEMPESN 420
Query: 181 LVSWNTILGALVQKSLFEDAIEHFRVMQSVGIEADKVTMVSVASACGYLGGLDLAKWTYN 360
LVSWNT++GA+VQ S+FE+AI+ R MQ+ GI+ D+VTMV +ASACGYLG LDLAKW Y
Sbjct: 421 LVSWNTMIGAMVQASMFEEAIDLLREMQNQGIKGDRVTMVGIASACGYLGALDLAKWIYT 480
Query: 361 YINNNEIHCDLQLSTALVDMFARCGDP 441
YI N+IH D+QL TALVDMF+RCGDP
Sbjct: 481 YIEKNDIHIDMQLGTALVDMFSRCGDP 507
Score = 74.7 bits (182), Expect = 7e-12
Identities = 46/145 (31%), Positives = 68/145 (46%)
Frame = +1
Query: 1 VSNALIDIYMKCGKKELGCVIFDRMLNKTIVSWNSLIAGLIRNDDVESARRIFNEMPDAD 180
V NAL+D+YMKCG D+ + R IF+E D +
Sbjct: 260 VVNALLDMYMKCG-------------------------------DMYAVREIFDEFSDKN 288
Query: 181 LVSWNTILGALVQKSLFEDAIEHFRVMQSVGIEADKVTMVSVASACGYLGGLDLAKWTYN 360
LV +NTI+ VQ L + + M G DKVTM+S +AC LG L + K ++
Sbjct: 289 LVMYNTIMSNYVQHGLAGEVLVVLDEMLQKGQRPDKVTMLSTIAACAQLGDLSVGKSSHA 348
Query: 361 YINNNEIHCDLQLSTALVDMFARCG 435
Y+ N + +S A++DM+ +CG
Sbjct: 349 YVFRNGLERLDNISNAIIDMYMKCG 373
Score = 68.9 bits (167), Expect = 4e-10
Identities = 42/146 (28%), Positives = 69/146 (47%)
Frame = +1
Query: 1 VSNALIDIYMKCGKKELGCVIFDRMLNKTIVSWNSLIAGLIRNDDVESARRIFNEMPDAD 180
V+N+LI Y CGK +LG R++F+EM + +
Sbjct: 159 VANSLIHFYAACGKVDLG-------------------------------RKVFDEMLERN 187
Query: 181 LVSWNTILGALVQKSLFEDAIEHFRVMQSVGIEADKVTMVSVASACGYLGGLDLAKWTYN 360
+VSW +++ ++ ++A+ F M VG+E + VTMV SAC L L+L K N
Sbjct: 188 VVSWTSLINGYSVVNMAKEAVCLFFEMVEVGVEPNPVTMVCAISACAKLKDLELGKKVCN 247
Query: 361 YINNNEIHCDLQLSTALVDMFARCGD 438
+ + + + AL+DM+ +CGD
Sbjct: 248 LMTELGVKSNTLVVNALLDMYMKCGD 273
>ref|XP_003538647.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g22690-like [Glycine max]
Length = 836
Score = 214 bits (545), Expect = 6e-54
Identities = 100/147 (68%), Positives = 122/147 (82%)
Frame = +1
Query: 1 VSNALIDIYMKCGKKELGCVIFDRMLNKTIVSWNSLIAGLIRNDDVESARRIFNEMPDAD 180
+SNA+ID+YMKCGK+E C +F+ M NKT+V+WNSLIAGL+R+ D+E A RIF+EM + D
Sbjct: 369 ISNAIIDMYMKCGKREAACKVFEHMPNKTVVTWNSLIAGLVRDGDMELAWRIFDEMLERD 428
Query: 181 LVSWNTILGALVQKSLFEDAIEHFRVMQSVGIEADKVTMVSVASACGYLGGLDLAKWTYN 360
LVSWNT++GALVQ S+FE+AIE FR MQ+ GI D+VTMV +ASACGYLG LDLAKW
Sbjct: 429 LVSWNTMIGALVQVSMFEEAIELFREMQNQGIPGDRVTMVGIASACGYLGALDLAKWVCT 488
Query: 361 YINNNEIHCDLQLSTALVDMFARCGDP 441
YI N+IH DLQL TALVDMF+RCGDP
Sbjct: 489 YIEKNDIHVDLQLGTALVDMFSRCGDP 515
Score = 74.3 bits (181), Expect = 1e-11
Identities = 45/146 (30%), Positives = 70/146 (47%)
Frame = +1
Query: 1 VSNALIDIYMKCGKKELGCVIFDRMLNKTIVSWNSLIAGLIRNDDVESARRIFNEMPDAD 180
VSN+LI Y +CGK +LG R++F+ M + +
Sbjct: 167 VSNSLIHFYAECGKVDLG-------------------------------RKLFDGMLERN 195
Query: 181 LVSWNTILGALVQKSLFEDAIEHFRVMQSVGIEADKVTMVSVASACGYLGGLDLAKWTYN 360
+VSW +++ + L ++A+ F M G+E + VTMV V SAC L L+L K +
Sbjct: 196 VVSWTSLINGYSGRDLSKEAVSLFFQMGEAGVEPNPVTMVCVISACAKLKDLELGKKVCS 255
Query: 361 YINNNEIHCDLQLSTALVDMFARCGD 438
YI+ + + ALVDM+ +CGD
Sbjct: 256 YISELGMELSTIMVNALVDMYMKCGD 281
Score = 72.0 bits (175), Expect = 5e-11
Identities = 44/143 (30%), Positives = 67/143 (46%)
Frame = +1
Query: 7 NALIDIYMKCGKKELGCVIFDRMLNKTIVSWNSLIAGLIRNDDVESARRIFNEMPDADLV 186
NAL+D+YMKCG D+ +AR+IF+E + +LV
Sbjct: 270 NALVDMYMKCG-------------------------------DICAARQIFDECANKNLV 298
Query: 187 SWNTILGALVQKSLFEDAIEHFRVMQSVGIEADKVTMVSVASACGYLGGLDLAKWTYNYI 366
+NTI+ V D + M G DKVTM+S +AC LG L + K ++ Y+
Sbjct: 299 MYNTIMSNYVHHEWASDVLVILDEMLQKGPRPDKVTMLSTIAACAQLGDLSVGKSSHAYV 358
Query: 367 NNNEIHCDLQLSTALVDMFARCG 435
N + +S A++DM+ +CG
Sbjct: 359 LRNGLEGWDNISNAIIDMYMKCG 381
>ref|XP_002279134.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22690
[Vitis vinifera]
Length = 836
Score = 209 bits (531), Expect = 2e-52
Identities = 96/148 (64%), Positives = 118/148 (79%)
Frame = +1
Query: 1 VSNALIDIYMKCGKKELGCVIFDRMLNKTIVSWNSLIAGLIRNDDVESARRIFNEMPDAD 180
+ N +ID+YMKCGK E+ C +FD M NKT+VSWNSL AG IRN DVESA +FN++P+ +
Sbjct: 370 IGNVIIDMYMKCGKPEMACRVFDLMSNKTVVSWNSLTAGFIRNGDVESAWEVFNQIPERN 429
Query: 181 LVSWNTILGALVQKSLFEDAIEHFRVMQSVGIEADKVTMVSVASACGYLGGLDLAKWTYN 360
V WNT++ LVQKSLFEDAIE FR MQ GI+AD+VTM+ +ASACGYLG +LAKW +
Sbjct: 430 AVFWNTMISGLVQKSLFEDAIELFREMQGEGIKADRVTMMGIASACGYLGAPELAKWVHT 489
Query: 361 YINNNEIHCDLQLSTALVDMFARCGDPQ 444
YI N I CD++L+TALVDMFARCGDPQ
Sbjct: 490 YIEKNGIPCDMRLNTALVDMFARCGDPQ 517
Score = 66.2 bits (160), Expect = 3e-09
Identities = 41/146 (28%), Positives = 66/146 (45%)
Frame = +1
Query: 7 NALIDIYMKCGKKELGCVIFDRMLNKTIVSWNSLIAGLIRNDDVESARRIFNEMPDADLV 186
NAL+D+YMKCG +++A+R+F+E D +LV
Sbjct: 271 NALVDMYMKCGA-------------------------------IDAAKRLFDECVDRNLV 299
Query: 187 SWNTILGALVQKSLFEDAIEHFRVMQSVGIEADKVTMVSVASACGYLGGLDLAKWTYNYI 366
+NTIL ++ L +A+ M G D+VTM+S SA L L K + Y+
Sbjct: 300 LYNTILSNYARQGLAREALAILDEMLQQGPRPDRVTMLSAISASAQLVDLFYGKVCHGYV 359
Query: 367 NNNEIHCDLQLSTALVDMFARCGDPQ 444
N + + ++DM+ +CG P+
Sbjct: 360 IRNGLEGWDSIGNVIIDMYMKCGKPE 385
Score = 58.9 bits (141), Expect = 4e-07
Identities = 34/120 (28%), Positives = 57/120 (47%)
Frame = +1
Query: 76 LNKTIVSWNSLIAGLIRNDDVESARRIFNEMPDADLVSWNTILGALVQKSLFEDAIEHFR 255
L + + N LI ++ ++F M + ++VSW +++ + ++A+ F
Sbjct: 162 LEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICGYARGDRPKEAVSLFF 221
Query: 256 VMQSVGIEADKVTMVSVASACGYLGGLDLAKWTYNYINNNEIHCDLQLSTALVDMFARCG 435
M GI VTMV V SAC L LD+ + YI + + + ALVDM+ +CG
Sbjct: 222 EMVEAGIRPSSVTMVCVISACAKLRDLDMGERVCAYIGELGLKLNKVMVNALVDMYMKCG 281
>ref|NP_188908.2| uncharacterized protein [Arabidopsis thaliana]
gi|332643144|gb|AEE76665.1| uncharacterized protein
[Arabidopsis thaliana]
Length = 938
Score = 182 bits (462), Expect = 2e-44
Identities = 87/149 (58%), Positives = 113/149 (75%), Gaps = 1/149 (0%)
Frame = +1
Query: 1 VSNALIDIYMKCGKKELGCVIFDRMLNKTIVSWNSLIAGLIRNDDVESARRIFNEMPDAD 180
+ NALID+YMKC +++ IFDRM NKT+V+WNS++AG + N +V++A F MP+ +
Sbjct: 374 ICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKN 433
Query: 181 LVSWNTILGALVQKSLFEDAIEHFRVMQS-VGIEADKVTMVSVASACGYLGGLDLAKWTY 357
+VSWNTI+ LVQ SLFE+AIE F MQS G+ AD VTM+S+ASACG+LG LDLAKW Y
Sbjct: 434 IVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIY 493
Query: 358 NYINNNEIHCDLQLSTALVDMFARCGDPQ 444
YI N I D++L T LVDMF+RCGDP+
Sbjct: 494 YYIEKNGIQLDVRLGTTLVDMFSRCGDPE 522
Score = 72.0 bits (175), Expect = 5e-11
Identities = 37/118 (31%), Positives = 70/118 (59%), Gaps = 1/118 (0%)
Frame = +1
Query: 82 KTIVSWNSLIAGLIRNDDVESARRIFNEMPDADLVSWNTILGALVQKSLFEDAIE-HFRV 258
K + NSL+ +++SAR++F+EM + ++VSW +++ ++ +DA++ FR+
Sbjct: 167 KDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRM 226
Query: 259 MQSVGIEADKVTMVSVASACGYLGGLDLAKWTYNYINNNEIHCDLQLSTALVDMFARC 432
++ + + VTMV V SAC L L+ + Y +I N+ I + + +ALVDM+ +C
Sbjct: 227 VRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKC 284