BLASTX nr result

ID: Panax21_contig00037853 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00037853
         (778 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN78929.1| hypothetical protein VITISV_026521 [Vitis vinifera]   242   7e-62
ref|XP_002332240.1| predicted protein [Populus trichocarpa] gi|2...   237   2e-60
emb|CBI22496.3| unnamed protein product [Vitis vinifera]              236   4e-60
ref|XP_002269406.2| PREDICTED: uncharacterized protein LOC100267...   234   2e-59
ref|XP_002279255.2| PREDICTED: uncharacterized protein LOC100247...   229   7e-58

>emb|CAN78929.1| hypothetical protein VITISV_026521 [Vitis vinifera]
          Length = 806

 Score =  242 bits (617), Expect = 7e-62
 Identities = 136/262 (51%), Positives = 173/262 (66%), Gaps = 12/262 (4%)
 Frame = -3

Query: 770 VSFDQLKDADFSPLIDVFFAY-SSEIEAVDILHTSSCLLNQDYIMSMMRAISLQLRVVNL 594
           V  D++KD DF PL+D+     +SEI+AVDI + SSC+LN +Y +S+MRAI+ +LR+V+L
Sbjct: 48  VFLDRVKDIDFYPLLDLLMEIDASEIDAVDIFNESSCVLNGEYALSLMRAINQKLRIVDL 107

Query: 593 QDVSFREDVLRGLFQGGLDCQVLNFRSTEIRELNISGKFMQMHTLNLDFCTSLTSLEKDC 414
           QD+S  +D LR L Q GL CQ LN RS+  R+LN+ GKFMQMHTLNLDF TSLTS  +DC
Sbjct: 108 QDLSLGKDFLRDLSQRGLTCQALNLRSSHFRKLNLIGKFMQMHTLNLDFSTSLTSFREDC 167

Query: 413 FACMPKLMRLSMCETRVSNLWTTTAALAKLPSLVELRFQNCLCCKDTRPCSASSNEQTNF 234
           F CMP L  LSMCETRVSNLWTT AAL+KLPSL ELRFQNCLCC DT PC  SS  + N 
Sbjct: 168 FTCMPNLRCLSMCETRVSNLWTTIAALSKLPSLAELRFQNCLCCYDTGPCPVSSGGKAND 227

Query: 233 LACGKIVSGQLSKYIKPPNIAG-----KNIT----HQTYFGDSSSIC--AAQSLTRDFLD 87
                 V  Q    I+ P++ G     +N T     Q +F  ++ I     Q+ T D  D
Sbjct: 228 RTYS--VQPQRGPLIEAPSVDGWILGNQNSTAQEAFQEFFLHNNVIMNPEFQNTTEDSSD 285

Query: 86  DSQVKKPTHHQRSEMLKLSSDS 21
           DS+V   TH Q   +++L S++
Sbjct: 286 DSEVDFSTHQQEFGLVELLSNA 307


>ref|XP_002332240.1| predicted protein [Populus trichocarpa] gi|222831853|gb|EEE70330.1|
           predicted protein [Populus trichocarpa]
          Length = 768

 Score =  237 bits (604), Expect = 2e-60
 Identities = 117/189 (61%), Positives = 150/189 (79%), Gaps = 1/189 (0%)
 Frame = -3

Query: 761 DQLKDADFSPLIDVFFAY-SSEIEAVDILHTSSCLLNQDYIMSMMRAISLQLRVVNLQDV 585
           +QL +AD  PLIDVF A  SS+++AVDILH S C  N++Y+M +++ I+L+LRVV+L D+
Sbjct: 41  NQLCNADIYPLIDVFLAIDSSDVDAVDILHESPCNFNEEYVMPLLQTINLKLRVVDLHDM 100

Query: 584 SFREDVLRGLFQGGLDCQVLNFRSTEIRELNISGKFMQMHTLNLDFCTSLTSLEKDCFAC 405
           S  E+ L+ L   GL C +LN RST I++LN++G FMQ+HTLNLDFCTS+ SL+KDCF+C
Sbjct: 101 SPEENFLQNLCHHGLACHILNMRSTHIQKLNMAGTFMQLHTLNLDFCTSIGSLDKDCFSC 160

Query: 404 MPKLMRLSMCETRVSNLWTTTAALAKLPSLVELRFQNCLCCKDTRPCSASSNEQTNFLAC 225
           MP LMRLSMCETRV+NLWTTTAAL+KLPSLVELRFQNCLCCKDT PC AS  ++   +A 
Sbjct: 161 MPSLMRLSMCETRVANLWTTTAALSKLPSLVELRFQNCLCCKDTGPCPASFGDKAR-IAF 219

Query: 224 GKIVSGQLS 198
            K+ S  L+
Sbjct: 220 EKLGSAPLN 228


>emb|CBI22496.3| unnamed protein product [Vitis vinifera]
          Length = 814

 Score =  236 bits (602), Expect = 4e-60
 Identities = 129/253 (50%), Positives = 164/253 (64%), Gaps = 3/253 (1%)
 Frame = -3

Query: 770 VSFDQLKDADFSPLIDVFFAY-SSEIEAVDILHTSSCLLNQDYIMSMMRAISLQLRVVNL 594
           V  D++KD DF PL+D+     +SEI+AVDI + SSC+LN +Y +S+MRAI+ +LR+V+L
Sbjct: 78  VFLDRVKDIDFYPLLDLLMEIDASEIDAVDIFNESSCVLNGEYALSLMRAINQKLRIVDL 137

Query: 593 QDVSFREDVLRGLFQGGLDCQVLNFRSTEIRELNISGKFMQMHTLNLDFCTSLTSLEKDC 414
           QD+S  +D LR L Q GL CQ LN RS+  R+LN+ GKFMQMHTLNLDF TSLTS  +DC
Sbjct: 138 QDLSLGKDFLRDLSQRGLTCQALNLRSSHFRKLNLIGKFMQMHTLNLDFSTSLTSFREDC 197

Query: 413 FACMPKLMRLSMCETRVSNLWTTTAALAKLPSLVELRFQNCLCCKDTRPCSASSNEQTNF 234
           F CMP L  LSMCETRVSNLWTT AAL+KLPSL ELRFQNCLCC DT PC  SS  + N 
Sbjct: 198 FTCMPNLRCLSMCETRVSNLWTTIAALSKLPSLAELRFQNCLCCYDTGPCPVSSGGKAN- 256

Query: 233 LACGKIVSGQLSKYIKPPNIAGKNITHQTYFGDSSSIC--AAQSLTRDFLDDSQVKKPTH 60
                                  + T+  +F  ++ I     Q+ T D  DDS+V   TH
Sbjct: 257 -----------------------DRTYSEFFLHNNVIMNPEFQNTTEDSSDDSEVDFSTH 293

Query: 59  HQRSEMLKLSSDS 21
            Q   +++L S++
Sbjct: 294 QQEFGLVELLSNA 306


>ref|XP_002269406.2| PREDICTED: uncharacterized protein LOC100267918 [Vitis vinifera]
          Length = 794

 Score =  234 bits (596), Expect = 2e-59
 Identities = 129/251 (51%), Positives = 165/251 (65%), Gaps = 1/251 (0%)
 Frame = -3

Query: 770 VSFDQLKDADFSPLIDVFFAY-SSEIEAVDILHTSSCLLNQDYIMSMMRAISLQLRVVNL 594
           V  D++KD DF PL+D+     +SEI+AVDI + SSC+LN +Y +S+MRAI+ +LR+V+L
Sbjct: 48  VFLDRVKDIDFYPLLDLLMEIDASEIDAVDIFNESSCVLNGEYALSLMRAINQKLRIVDL 107

Query: 593 QDVSFREDVLRGLFQGGLDCQVLNFRSTEIRELNISGKFMQMHTLNLDFCTSLTSLEKDC 414
           QD+S  +D LR L Q GL CQ LN RS+  R+LN+ GKFMQMHTLNLDF TSLTS  +DC
Sbjct: 108 QDLSLGKDFLRDLSQRGLTCQALNLRSSHFRKLNLIGKFMQMHTLNLDFSTSLTSFREDC 167

Query: 413 FACMPKLMRLSMCETRVSNLWTTTAALAKLPSLVELRFQNCLCCKDTRPCSASSNEQTNF 234
           F CMP L  LSMCETRVSNLWTT AAL+KLPSL ELRFQNCLCC DT PC  SS  + N 
Sbjct: 168 FTCMPNLRCLSMCETRVSNLWTTIAALSKLPSLAELRFQNCLCCYDTGPCPVSSGGKAND 227

Query: 233 LACGKIVSGQLSKYIKPPNIAGKNITHQTYFGDSSSICAAQSLTRDFLDDSQVKKPTHHQ 54
                 V  Q    I+ P++ G  + +Q           AQ   ++F    +V   TH Q
Sbjct: 228 RTYS--VQPQRGPLIEAPSVDGWILGNQN--------STAQEAFQEFF--FEVDFSTHQQ 275

Query: 53  RSEMLKLSSDS 21
              +++L S++
Sbjct: 276 EFGLVELLSNA 286


>ref|XP_002279255.2| PREDICTED: uncharacterized protein LOC100247452 [Vitis vinifera]
          Length = 804

 Score =  229 bits (583), Expect = 7e-58
 Identities = 111/175 (63%), Positives = 138/175 (78%), Gaps = 1/175 (0%)
 Frame = -3

Query: 770 VSFDQLKDADFSPLIDVFFAY-SSEIEAVDILHTSSCLLNQDYIMSMMRAISLQLRVVNL 594
           V  D L+ ADFSPLIDVF    SS I+AVDILH S  +L ++Y++SM+R I+L+LR+V L
Sbjct: 76  VLLDHLRAADFSPLIDVFLEIDSSNIDAVDILHESPIILTEEYVLSMIRTINLKLRLVEL 135

Query: 593 QDVSFREDVLRGLFQGGLDCQVLNFRSTEIRELNISGKFMQMHTLNLDFCTSLTSLEKDC 414
           +DVSF +D  R L   GL CQVL  RS+  ++LN+ G F+Q+HTLNLD+CT LTSL+KDC
Sbjct: 136 RDVSFGKDFFRDLSHDGLACQVLKLRSSHFQKLNMVGGFLQLHTLNLDYCTHLTSLQKDC 195

Query: 413 FACMPKLMRLSMCETRVSNLWTTTAALAKLPSLVELRFQNCLCCKDTRPCSASSN 249
           FACMP LMRLSMCETRV+NLWTT+A L+K+PSLVELRFQ C CC++T PC  SSN
Sbjct: 196 FACMPNLMRLSMCETRVANLWTTSAVLSKIPSLVELRFQTCPCCENTGPCPMSSN 250


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