BLASTX nr result

ID: Panax21_contig00037845 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00037845
         (622 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29214.3| unnamed protein product [Vitis vinifera]              245   4e-63
ref|XP_002270503.1| PREDICTED: alkylated DNA repair protein alkB...   245   4e-63
emb|CAN76404.1| hypothetical protein VITISV_021238 [Vitis vinifera]   225   4e-57
ref|XP_003612528.1| Alkylated DNA repair protein alkB-like prote...   218   9e-55
ref|XP_002519921.1| nucleic acid binding protein, putative [Rici...   217   1e-54

>emb|CBI29214.3| unnamed protein product [Vitis vinifera]
          Length = 912

 Score =  245 bits (626), Expect = 4e-63
 Identities = 120/172 (69%), Positives = 136/172 (79%)
 Frame = +1

Query: 106  LMGLPRFTRPRAREGVSSPNLYVANCGPAVRLTFDTITSTFSTYGTVKGVYPADESGTRV 285
            +MGLPRF+RP+  +G  SPNLYVANCGPAV L+FDTI S FST+G VKGVYPAD+SG RV
Sbjct: 572  IMGLPRFSRPKGVDGELSPNLYVANCGPAVGLSFDTIASVFSTFGEVKGVYPADDSGARV 631

Query: 286  IVSYLDNCSAQAAFDALDGRPCLELGGRTLHIKYSVFQPPSQVQVNDSVPVSLSALDLNI 465
            IVSY +  +AQAA  ALDG PC  LGGR LHI+YS+FQPPS  QVNDSVPVSL   +LNI
Sbjct: 632  IVSYFEESAAQAALKALDGHPCPALGGRFLHIRYSIFQPPS--QVNDSVPVSLVDSELNI 689

Query: 466  PGIYLIHDFINXXXXXXXXXXVDCRPWKSLAKRRVQHYGYEFCYETRNVNTK 621
            PGIYL+HDF++          VD   WKSL+KRRVQHYGYEFCYETRNVNTK
Sbjct: 690  PGIYLLHDFVSAKEEEELLAAVDKMSWKSLSKRRVQHYGYEFCYETRNVNTK 741


>ref|XP_002270503.1| PREDICTED: alkylated DNA repair protein alkB homolog 8-like [Vitis
           vinifera]
          Length = 349

 Score =  245 bits (626), Expect = 4e-63
 Identities = 120/172 (69%), Positives = 136/172 (79%)
 Frame = +1

Query: 106 LMGLPRFTRPRAREGVSSPNLYVANCGPAVRLTFDTITSTFSTYGTVKGVYPADESGTRV 285
           +MGLPRF+RP+  +G  SPNLYVANCGPAV L+FDTI S FST+G VKGVYPAD+SG RV
Sbjct: 9   IMGLPRFSRPKGVDGELSPNLYVANCGPAVGLSFDTIASVFSTFGEVKGVYPADDSGARV 68

Query: 286 IVSYLDNCSAQAAFDALDGRPCLELGGRTLHIKYSVFQPPSQVQVNDSVPVSLSALDLNI 465
           IVSY +  +AQAA  ALDG PC  LGGR LHI+YS+FQPPS  QVNDSVPVSL   +LNI
Sbjct: 69  IVSYFEESAAQAALKALDGHPCPALGGRFLHIRYSIFQPPS--QVNDSVPVSLVDSELNI 126

Query: 466 PGIYLIHDFINXXXXXXXXXXVDCRPWKSLAKRRVQHYGYEFCYETRNVNTK 621
           PGIYL+HDF++          VD   WKSL+KRRVQHYGYEFCYETRNVNTK
Sbjct: 127 PGIYLLHDFVSAKEEEELLAAVDKMSWKSLSKRRVQHYGYEFCYETRNVNTK 178


>emb|CAN76404.1| hypothetical protein VITISV_021238 [Vitis vinifera]
          Length = 1036

 Score =  225 bits (574), Expect = 4e-57
 Identities = 112/172 (65%), Positives = 128/172 (74%)
 Frame = +1

Query: 106  LMGLPRFTRPRAREGVSSPNLYVANCGPAVRLTFDTITSTFSTYGTVKGVYPADESGTRV 285
            +MGLPRF+RP+  +G  SPNLYVANCGPAV L+FDTI S FST+G VKGVYPAD+SG RV
Sbjct: 657  IMGLPRFSRPKGVDGELSPNLYVANCGPAVGLSFDTIASVFSTFGEVKGVYPADDSGARV 716

Query: 286  IVSYLDNCSAQAAFDALDGRPCLELGGRTLHIKYSVFQPPSQVQVNDSVPVSLSALDLNI 465
            IVSY +  +AQAA  ALDG PC  LGGR LHI+YS+FQPPSQ     S        +LNI
Sbjct: 717  IVSYFEESAAQAALKALDGHPCPALGGRFLHIRYSIFQPPSQYLWWIS--------ELNI 768

Query: 466  PGIYLIHDFINXXXXXXXXXXVDCRPWKSLAKRRVQHYGYEFCYETRNVNTK 621
            PGIYL+HDF++          VD   WKSL+KRRVQHYGYEFCYETRNVNTK
Sbjct: 769  PGIYLLHDFVSAKEEEELLAAVDKMSWKSLSKRRVQHYGYEFCYETRNVNTK 820


>ref|XP_003612528.1| Alkylated DNA repair protein alkB-like protein [Medicago
           truncatula] gi|355513863|gb|AES95486.1| Alkylated DNA
           repair protein alkB-like protein [Medicago truncatula]
          Length = 344

 Score =  218 bits (554), Expect = 9e-55
 Identities = 109/171 (63%), Positives = 130/171 (76%)
 Frame = +1

Query: 109 MGLPRFTRPRAREGVSSPNLYVANCGPAVRLTFDTITSTFSTYGTVKGVYPADESGTRVI 288
           MGLPRF RP+  + +SS NL+VANCGPAV ++ D I S FS +G + GVY AD+SGTRVI
Sbjct: 1   MGLPRFGRPKNGDELSS-NLFVANCGPAVGISDDEIASVFSKFGELNGVYAADDSGTRVI 59

Query: 289 VSYLDNCSAQAAFDALDGRPCLELGGRTLHIKYSVFQPPSQVQVNDSVPVSLSALDLNIP 468
           VS+ D  SAQ+AF AL G+PC ELGGR+L I+YSV QP  Q QV D VPVS++A DLNIP
Sbjct: 60  VSFSDVGSAQSAFMALHGKPCPELGGRSLFIRYSVLQPNPQDQVKDLVPVSMTASDLNIP 119

Query: 469 GIYLIHDFINXXXXXXXXXXVDCRPWKSLAKRRVQHYGYEFCYETRNVNTK 621
           G+YL+HDF++          VD RPW SLAKRRVQHYGYEFCY+ RNVNTK
Sbjct: 120 GLYLLHDFVSATEEEELLQSVDSRPWNSLAKRRVQHYGYEFCYDIRNVNTK 170


>ref|XP_002519921.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223540967|gb|EEF42525.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 421

 Score =  217 bits (553), Expect = 1e-54
 Identities = 112/191 (58%), Positives = 139/191 (72%), Gaps = 6/191 (3%)
 Frame = +1

Query: 67  TVHDSELP-KPQTKL---MGL--PRFTRPRAREGVSSPNLYVANCGPAVRLTFDTITSTF 228
           T    +LP KP   L   MGL  PRFTRP+  +   +PNLYVANCGPAV ++++ I S F
Sbjct: 19  TASSFQLPAKPSNLLVSIMGLTRPRFTRPKGVDEHLNPNLYVANCGPAVGISYEMIESVF 78

Query: 229 STYGTVKGVYPADESGTRVIVSYLDNCSAQAAFDALDGRPCLELGGRTLHIKYSVFQPPS 408
           S++G VKGVY ADESG RVIVSY +  SAQ+AF++L G+PC   GGR LHI++SV QP  
Sbjct: 79  SSFGEVKGVYAADESGARVIVSYFEVSSAQSAFNSLSGKPCPRFGGRYLHIRFSVLQP-- 136

Query: 409 QVQVNDSVPVSLSALDLNIPGIYLIHDFINXXXXXXXXXXVDCRPWKSLAKRRVQHYGYE 588
             +VNDS+PVSL A +LNIPG+YL+ DF++          VD RPWKSL+KRRVQHYGYE
Sbjct: 137 TCEVNDSIPVSLVASELNIPGLYLLPDFVSAEEEQELLAAVDARPWKSLSKRRVQHYGYE 196

Query: 589 FCYETRNVNTK 621
           FCY+TRNV+TK
Sbjct: 197 FCYQTRNVDTK 207


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