BLASTX nr result

ID: Panax21_contig00037818 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00037818
         (575 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68271.1| hypothetical protein VITISV_029912 [Vitis vinifera]    77   2e-12
ref|XP_002320420.1| predicted protein [Populus trichocarpa] gi|2...    72   7e-11
ref|XP_002873641.1| hypothetical protein ARALYDRAFT_488220 [Arab...    61   2e-07
ref|NP_196899.2| uncharacterized protein [Arabidopsis thaliana] ...    60   3e-07
dbj|BAC41867.1| unknown protein [Arabidopsis thaliana] gi|290290...    60   3e-07

>emb|CAN68271.1| hypothetical protein VITISV_029912 [Vitis vinifera]
          Length = 875

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 39/69 (56%), Positives = 47/69 (68%)
 Frame = +1

Query: 4    SMSSDERFNQSGNYNGVGGGAPATSNVLFWTVNPLDYLSGHEAADGPKTNNLGLISLPQQ 183
            SM S E F  S NY G+GGG P ++ VL    NPL++LSG EAA  PKTNN+G  SLP Q
Sbjct: 807  SMGSTEHFISSRNYGGLGGGIPRSTTVLPQAANPLNFLSGCEAAATPKTNNMGWTSLPHQ 866

Query: 184  NAALHDPMG 210
            N+AL+D  G
Sbjct: 867  NSALNDSNG 875


>ref|XP_002320420.1| predicted protein [Populus trichocarpa] gi|222861193|gb|EEE98735.1|
            predicted protein [Populus trichocarpa]
          Length = 912

 Score = 72.0 bits (175), Expect = 7e-11
 Identities = 37/77 (48%), Positives = 47/77 (61%)
 Frame = +1

Query: 4    SMSSDERFNQSGNYNGVGGGAPATSNVLFWTVNPLDYLSGHEAADGPKTNNLGLISLPQQ 183
            S+ S E+F     Y  V G  P  SN L    +PLDY SG + A     +++G ++LPQ 
Sbjct: 836  SVGSAEQFVLPRAYGMVSGVTPRVSNALPQPAHPLDYFSGRDTASSLMPDDMGWMALPQ- 894

Query: 184  NAALHDPMGKPYLRSWN 234
            N+ LHDPMGKPYLRSWN
Sbjct: 895  NSVLHDPMGKPYLRSWN 911


>ref|XP_002873641.1| hypothetical protein ARALYDRAFT_488220 [Arabidopsis lyrata subsp.
            lyrata] gi|297319478|gb|EFH49900.1| hypothetical protein
            ARALYDRAFT_488220 [Arabidopsis lyrata subsp. lyrata]
          Length = 943

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 32/77 (41%), Positives = 44/77 (57%), Gaps = 2/77 (2%)
 Frame = +1

Query: 10   SSDERFNQSGNYNGV--GGGAPATSNVLFWTVNPLDYLSGHEAADGPKTNNLGLISLPQQ 183
            SS  +   SGNY  +  GGG    S+ L    NPLDYLSG         +++  ++  +Q
Sbjct: 866  SSSHQMVASGNYGMLMGGGGTTQVSSNLVQPANPLDYLSGSNPTTSLMPDDVAWMNQSRQ 925

Query: 184  NAALHDPMGKPYLRSWN 234
            N++LHDP+GK Y RSWN
Sbjct: 926  NSSLHDPLGKLYPRSWN 942


>ref|NP_196899.2| uncharacterized protein [Arabidopsis thaliana]
            gi|145334397|ref|NP_001078580.1| uncharacterized protein
            [Arabidopsis thaliana] gi|332004580|gb|AED91963.1|
            uncharacterized protein [Arabidopsis thaliana]
            gi|332004581|gb|AED91964.1| uncharacterized protein
            [Arabidopsis thaliana]
          Length = 939

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 32/76 (42%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
 Frame = +1

Query: 10   SSDERFNQSGNYNGV-GGGAPATSNVLFWTVNPLDYLSGHEAADGPKTNNLGLISLPQQN 186
            SS  +   SGNY  + GGG+   S+ L    NPLDYLSG         +++  ++  +QN
Sbjct: 863  SSSHQMVASGNYGMLMGGGSTQVSSNLVQPANPLDYLSGSNPTTSLMPDDVVWMNQSRQN 922

Query: 187  AALHDPMGKPYLRSWN 234
            + LHDP+GK Y RSWN
Sbjct: 923  SGLHDPLGKLYPRSWN 938


>dbj|BAC41867.1| unknown protein [Arabidopsis thaliana] gi|29029052|gb|AAO64905.1|
            At5g13950 [Arabidopsis thaliana]
          Length = 939

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 32/76 (42%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
 Frame = +1

Query: 10   SSDERFNQSGNYNGV-GGGAPATSNVLFWTVNPLDYLSGHEAADGPKTNNLGLISLPQQN 186
            SS  +   SGNY  + GGG+   S+ L    NPLDYLSG         +++  ++  +QN
Sbjct: 863  SSSHQMVASGNYGMLMGGGSTQVSSNLVQPANPLDYLSGSNPTTSLMPDDVVWMNQSRQN 922

Query: 187  AALHDPMGKPYLRSWN 234
            + LHDP+GK Y RSWN
Sbjct: 923  SGLHDPLGKLYPRSWN 938


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