BLASTX nr result

ID: Panax21_contig00037796 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00037796
         (444 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280700.1| PREDICTED: protein LTV1 homolog [Vitis vinif...    47   7e-10
ref|NP_190568.1| uncharacterized protein [Arabidopsis thaliana] ...    43   7e-06

>ref|XP_002280700.1| PREDICTED: protein LTV1 homolog [Vitis vinifera]
          Length = 576

 Score = 46.6 bits (109), Expect(3) = 7e-10
 Identities = 21/24 (87%), Positives = 24/24 (100%)
 Frame = -2

Query: 308 VGKKKFIDKKKSATFQLIARDTSD 237
           +GKKKFIDKKKSATFQL+ARD+SD
Sbjct: 1   MGKKKFIDKKKSATFQLLARDSSD 24



 Score = 34.7 bits (78), Expect(3) = 7e-10
 Identities = 19/28 (67%), Positives = 20/28 (71%), Gaps = 4/28 (14%)
 Frame = -2

Query: 74  SWLSRGAPS----FPDHVRREILELGFP 3
           S LS GA +     PDHVRREILELGFP
Sbjct: 94  SQLSIGATAAAVPLPDHVRREILELGFP 121



 Score = 26.2 bits (56), Expect(3) = 7e-10
 Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 3/28 (10%)
 Frame = -1

Query: 201 VFIRVDDNSYSIDSF---NDTVSDDRRY 127
           VFIRVD+N YS+D     +D +S    Y
Sbjct: 36  VFIRVDNNPYSVDGIFHESDDLSGPSHY 63


>ref|NP_190568.1| uncharacterized protein [Arabidopsis thaliana]
           gi|6522920|emb|CAB62107.1| putative protein [Arabidopsis
           thaliana] gi|26449737|dbj|BAC41992.1| unknown protein
           [Arabidopsis thaliana] gi|29028882|gb|AAO64820.1|
           At3g49990 [Arabidopsis thaliana]
           gi|332645093|gb|AEE78614.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 502

 Score = 42.7 bits (99), Expect(3) = 7e-06
 Identities = 19/24 (79%), Positives = 22/24 (91%)
 Frame = -2

Query: 308 VGKKKFIDKKKSATFQLIARDTSD 237
           +GKKKFIDKKK+ATF+L  RDTSD
Sbjct: 1   MGKKKFIDKKKAATFELCPRDTSD 24



 Score = 30.0 bits (66), Expect(3) = 7e-06
 Identities = 12/16 (75%), Positives = 14/16 (87%)
 Frame = -2

Query: 50  SFPDHVRREILELGFP 3
           S P HVR+EILELG+P
Sbjct: 84  SLPAHVRKEILELGYP 99



 Score = 20.8 bits (42), Expect(3) = 7e-06
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -1

Query: 201 VFIRVDDNSYSIDSF 157
           +F+RVD N  +I+ F
Sbjct: 36  IFLRVDQNPVNINGF 50


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