BLASTX nr result
ID: Panax21_contig00037796
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00037796 (444 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002280700.1| PREDICTED: protein LTV1 homolog [Vitis vinif... 47 7e-10 ref|NP_190568.1| uncharacterized protein [Arabidopsis thaliana] ... 43 7e-06 >ref|XP_002280700.1| PREDICTED: protein LTV1 homolog [Vitis vinifera] Length = 576 Score = 46.6 bits (109), Expect(3) = 7e-10 Identities = 21/24 (87%), Positives = 24/24 (100%) Frame = -2 Query: 308 VGKKKFIDKKKSATFQLIARDTSD 237 +GKKKFIDKKKSATFQL+ARD+SD Sbjct: 1 MGKKKFIDKKKSATFQLLARDSSD 24 Score = 34.7 bits (78), Expect(3) = 7e-10 Identities = 19/28 (67%), Positives = 20/28 (71%), Gaps = 4/28 (14%) Frame = -2 Query: 74 SWLSRGAPS----FPDHVRREILELGFP 3 S LS GA + PDHVRREILELGFP Sbjct: 94 SQLSIGATAAAVPLPDHVRREILELGFP 121 Score = 26.2 bits (56), Expect(3) = 7e-10 Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 3/28 (10%) Frame = -1 Query: 201 VFIRVDDNSYSIDSF---NDTVSDDRRY 127 VFIRVD+N YS+D +D +S Y Sbjct: 36 VFIRVDNNPYSVDGIFHESDDLSGPSHY 63 >ref|NP_190568.1| uncharacterized protein [Arabidopsis thaliana] gi|6522920|emb|CAB62107.1| putative protein [Arabidopsis thaliana] gi|26449737|dbj|BAC41992.1| unknown protein [Arabidopsis thaliana] gi|29028882|gb|AAO64820.1| At3g49990 [Arabidopsis thaliana] gi|332645093|gb|AEE78614.1| uncharacterized protein [Arabidopsis thaliana] Length = 502 Score = 42.7 bits (99), Expect(3) = 7e-06 Identities = 19/24 (79%), Positives = 22/24 (91%) Frame = -2 Query: 308 VGKKKFIDKKKSATFQLIARDTSD 237 +GKKKFIDKKK+ATF+L RDTSD Sbjct: 1 MGKKKFIDKKKAATFELCPRDTSD 24 Score = 30.0 bits (66), Expect(3) = 7e-06 Identities = 12/16 (75%), Positives = 14/16 (87%) Frame = -2 Query: 50 SFPDHVRREILELGFP 3 S P HVR+EILELG+P Sbjct: 84 SLPAHVRKEILELGYP 99 Score = 20.8 bits (42), Expect(3) = 7e-06 Identities = 7/15 (46%), Positives = 11/15 (73%) Frame = -1 Query: 201 VFIRVDDNSYSIDSF 157 +F+RVD N +I+ F Sbjct: 36 IFLRVDQNPVNINGF 50