BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00037781
         (537 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotc...   103   2e-24
emb|CAN79148.1| hypothetical protein VITISV_004343 [Vitis vinifera]   115   3e-24
emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera]   100   1e-23
emb|CAN72498.1| hypothetical protein VITISV_010513 [Vitis vinifera]   113   1e-23
emb|CAN82221.1| hypothetical protein VITISV_015226 [Vitis vinifera]    99   2e-23

>pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotch
           gi|531389|gb|AAA57005.1| copia-like retrotransposon
           Hopscotch polyprotein [Zea mays]
          Length = 1439

 Score =  103 bits (256), Expect(2) = 2e-24
 Identities = 50/118 (42%), Positives = 72/118 (61%)
 Frame = +1

Query: 37  WYPDTGANHHVTPDLTGINHVDEYTGSDHLQVANGNLAPITNIFSTNFNYNNQNFQISPI 216
           WY DTGA  H+T DL  +   D+YTG+D +  ANG    I+NI +     ++++  +  +
Sbjct: 323 WYTDTGATDHITGDLDRLTMHDKYTGTDQIIAANGTGMTISNIGNAIVPTSSRSLHLRSV 382

Query: 217 LHVPSASKRLLSVNKFCHDNNVFFEFHSSCFHVKDPVSNQTLFNGPTKDGLYTLSAAP 390
           LHVPS  K L+SV++  +DN+VF EFHSS F +KD  +   L +G  +DGLY L   P
Sbjct: 383 LHVPSTHKNLISVHRLTNDNDVFIEFHSSHFLIKDRQTKAVLLHGKCRDGLYPLPPHP 440



 Score = 34.3 bits (77), Expect(2) = 2e-24
 Identities = 15/39 (38%), Positives = 24/39 (61%)
 Frame = +2

Query: 404 SASRVSLSDCHRRLGHPHDRVLRHIISTNSLSVPPHKAT 520
           S++RV L   H+RLGHP   ++  +IS N+L    + +T
Sbjct: 449 SSTRVPLEHWHKRLGHPSRDIVHRVISNNNLPCLSNNST 487


>emb|CAN79148.1| hypothetical protein VITISV_004343 [Vitis vinifera]
          Length = 1334

 Score =  115 bits (289), Expect = 3e-24
 Identities = 52/118 (44%), Positives = 78/118 (66%)
 Frame = +1

Query: 34  NWYPDTGANHHVTPDLTGINHVDEYTGSDHLQVANGNLAPITNIFSTNFNYNNQNFQISP 213
           +W+ DTGA HH++     ++ V  Y+G+D + + +GN  PI N  + +F + ++ F ++ 
Sbjct: 345 SWFFDTGATHHLSHSAQTLSCVQPYSGTDQVTIGDGNSLPILNTGTKSFFFPSKTFSLNQ 404

Query: 214 ILHVPSASKRLLSVNKFCHDNNVFFEFHSSCFHVKDPVSNQTLFNGPTKDGLYTLSAA 387
           +LHVP  S  L+SV+KFC DN VFFEFHSSCF VKD V+ + L  G  +DGLY  S++
Sbjct: 405 VLHVPHLSTNLISVSKFCTDNAVFFEFHSSCFFVKDQVTKKILLKGWLRDGLYEFSSS 462


>emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera]
          Length = 1449

 Score = 99.8 bits (247), Expect(2) = 1e-23
 Identities = 47/116 (40%), Positives = 69/116 (59%)
 Frame = +1

Query: 37  WYPDTGANHHVTPDLTGINHVDEYTGSDHLQVANGNLAPITNIFSTNFNYNNQNFQISPI 216
           W+ DTGA HH++  +  ++ V  Y G+D + V NG    I +  +T F  +++ FQ+  +
Sbjct: 378 WFFDTGATHHLSQSIDPLSDVQPYMGNDKVIVGNGKHLRILHTGTTFFPSSSKTFQLRQV 437

Query: 217 LHVPSASKRLLSVNKFCHDNNVFFEFHSSCFHVKDPVSNQTLFNGPTKDGLYTLSA 384
           LHVP  +  L+SV++FC DNN FFEFH   F VKD V+ + L  G  + GLY   A
Sbjct: 438 LHVPDIATNLISVSQFCADNNTFFEFHPRFFFVKDQVTKKILLQGSLEHGLYRFPA 493



 Score = 35.0 bits (79), Expect(2) = 1e-23
 Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
 Frame = +2

Query: 359 RMVSTPYQPLLPSLLSASRVSLSDC----HRRLGHPHDRVLRHIISTNSLSVPPHK 514
           R V +P   +  S   +S +SL+      H RLGHP D +L+HI+++ ++S   HK
Sbjct: 494 RFVPSPAAFVSSSYDRSSNLSLTTTTTLWHSRLGHPADNILKHILTSCNISHQCHK 549


>emb|CAN72498.1| hypothetical protein VITISV_010513 [Vitis vinifera]
          Length = 1394

 Score =  113 bits (283), Expect(2) = 1e-23
 Identities = 51/113 (45%), Positives = 77/113 (68%)
 Frame = +1

Query: 34  NWYPDTGANHHVTPDLTGINHVDEYTGSDHLQVANGNLAPITNIFSTNFNYNNQNFQISP 213
           +W+ DTGA HH++     ++HV  Y+G+D + + +G+  PI N  + +F ++++ F ++ 
Sbjct: 350 SWFFDTGATHHLSHSAQTLSHVQPYSGADQVTIGDGHSLPILNTGNKSFFFHSKVFCLNQ 409

Query: 214 ILHVPSASKRLLSVNKFCHDNNVFFEFHSSCFHVKDPVSNQTLFNGPTKDGLY 372
           +LHVP  S  L+SV+KFC DN VFFEFHS+ F VKD V+ QTL  G  +DGLY
Sbjct: 410 VLHVPQLSTNLISVSKFCTDNAVFFEFHSTHFFVKDQVTKQTLLKGWLRDGLY 462



 Score = 21.2 bits (43), Expect(2) = 1e-23
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +2

Query: 434 HRRLGHPHDRVLRHIISTNSLSV 502
           H RLGHP   +L   +++ + SV
Sbjct: 489 HSRLGHPAXPILSKALASCNPSV 511


>emb|CAN82221.1| hypothetical protein VITISV_015226 [Vitis vinifera]
          Length = 1007

 Score = 98.6 bits (244), Expect(2) = 2e-23
 Identities = 46/116 (39%), Positives = 69/116 (59%)
 Frame = +1

Query: 37  WYPDTGANHHVTPDLTGINHVDEYTGSDHLQVANGNLAPITNIFSTNFNYNNQNFQISPI 216
           W+ D GA HH++  +  ++ V  Y G+D + V NG    I + ++T F  +++ FQ+  +
Sbjct: 30  WFFDXGATHHLSQSVNPLSDVQPYMGNDKVIVGNGKHLRILHTYTTFFPSSSKIFQLRQV 89

Query: 217 LHVPSASKRLLSVNKFCHDNNVFFEFHSSCFHVKDPVSNQTLFNGPTKDGLYTLSA 384
           LHVP  +  L+SV++FC DNN FFEFH   F VKD V+ + L  G  + GLY   A
Sbjct: 90  LHVPDIATNLISVSQFCADNNTFFEFHPRFFFVKDQVTKKILLQGSLEHGLYRFPA 145



 Score = 35.8 bits (81), Expect(2) = 2e-23
 Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
 Frame = +2

Query: 359 RMVSTPYQPLLPSLLSASRVSLSDC----HRRLGHPHDRVLRHIISTNSLSVPPHK 514
           R V +P   +  S   +S +SL+      H RLGHP D +L+HI+++ ++S   HK
Sbjct: 146 RFVPSPTAFVSSSYDRSSNISLTTITTLWHSRLGHPADNILKHILTSCNISHQCHK 201